RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 DCTN5Q9BTE1 182 aa10.32□□□□□ -0.76
NEDD4L-208ENST00000456173 CEACAM3P40198 252 aa10.32□□□□□ -0.76
NEDD4L-208ENST00000456173 BOD1L2Q8IYS8 172 aa10.32□□□□□ -0.76
NEDD4L-208ENST00000456173 SMIM20Q8N5G0 67 aa10.32□□□□□ -0.76
NEDD4L-208ENST00000456173 C18orf32Q8TCD1 76 aa10.32□□□□□ -0.76
NEDD4L-208ENST00000456173 C16orf92Q96LL3 132 aa10.32□□□□□ -0.76
NEDD4L-208ENST00000456173 IFI6P09912 130 aa10.32□□□□□ -0.76
NEDD4L-208ENST00000456173 ECSCRQ19T08 205 aa10.32□□□□□ -0.76
NEDD4L-208ENST00000456173 BVES-AS1Q5T3Y7 98 aa10.32□□□□□ -0.76
NEDD4L-208ENST00000456173 Q6AWC8 147 aa10.32□□□□□ -0.76
NEDD4L-208ENST00000456173 PRSS57Q6UWY2 283 aa10.32□□□□□ -0.76
NEDD4L-208ENST00000456173 CHAC1Q9BUX1 264 aa10.32□□□□□ -0.76
NEDD4L-208ENST00000456173 DOCK3Q8IZD9 2030 aa10.32□□□□□ -0.76
NEDD4L-208ENST00000456173 UTRNP46939 3433 aa10.32□□□□□ -0.76
NEDD4L-208ENST00000456173 TNFRSF6BO95407 300 aa10.32□□□□□ -0.76
NEDD4L-208ENST00000456173 LHFPL4Q7Z7J7 247 aa10.32□□□□□ -0.76
NEDD4L-208ENST00000456173 GCSAMQ8N6F7 178 aa10.32□□□□□ -0.76
NEDD4L-208ENST00000456173 ZNF837Q96EG3 531 aaPredicted RBP10.32□□□□□ -0.76
NEDD4L-208ENST00000456173 GGTLC1Q9BX51 225 aa10.32□□□□□ -0.76
NEDD4L-208ENST00000456173 CHD3Q12873 2000 aaKnown RBP10.31□□□□□ -0.76
NEDD4L-208ENST00000456173 TDRD6O60522 2096 aaKnown RBP10.31□□□□□ -0.76
NEDD4L-208ENST00000456173 NCR2O95944 276 aa10.31□□□□□ -0.76
NEDD4L-208ENST00000456173 SHISA5Q8N114 240 aa10.31□□□□□ -0.76
NEDD4L-208ENST00000456173 CIARTQ8N365 385 aaPredicted RBP10.31□□□□□ -0.76
NEDD4L-208ENST00000456173 TGFBR3LH3BV60 316 aa10.31□□□□□ -0.76
NEDD4L-208ENST00000456173 C10orf128Q5T292 105 aa10.31□□□□□ -0.76
NEDD4L-208ENST00000456173 TEX45Q8NA69 505 aa10.31□□□□□ -0.76
NEDD4L-208ENST00000456173 SIT1Q9Y3P8 196 aa10.31□□□□□ -0.76
NEDD4L-208ENST00000456173 LINC01565O15544 149 aa10.31□□□□□ -0.76
NEDD4L-208ENST00000456173 SYNGR3O43761 229 aa10.31□□□□□ -0.76
NEDD4L-208ENST00000456173 CSRP2Q16527 193 aa10.31□□□□□ -0.76
NEDD4L-208ENST00000456173 SLC25A2Q9BXI2 301 aa10.31□□□□□ -0.76
NEDD4L-208ENST00000456173 SRXN1Q9BYN0 137 aa10.31□□□□□ -0.76
NEDD4L-208ENST00000456173 A0A1W2PQF6 199 aa10.31□□□□□ -0.76
NEDD4L-208ENST00000456173 D6R8Y8 96 aa10.31□□□□□ -0.76
NEDD4L-208ENST00000456173 PRRG2O14669 202 aa10.31□□□□□ -0.76
NEDD4L-208ENST00000456173 C9orf153Q5TBE3 101 aa10.31□□□□□ -0.76
NEDD4L-208ENST00000456173 IGHV3OR16-13A0A075B7E8 117 aa10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 IGHV3-74A0A0B4J1X5 117 aa10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 PTGDSP41222 190 aa10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 C1QTNF5Q9BXJ0 243 aa10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 F2Z2F3 143 aa10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 PPIFP30405 207 aaKnown RBP10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 KLF17Q5JT82 389 aaPredicted RBP10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 PILRBQ9UKJ0 227 aa10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 ERG28Q9UKR5 140 aa10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 KLF12Q9Y4X4 402 aa10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 S4R3C0 116 aa10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 HEATR1Q9H583 2144 aaKnown RBP10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 IGKV3D-11A0A0A0MRZ8 115 aa10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 K7EQS6 105 aa10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 PPP1R17O96001 155 aa10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 IGKV3-11P04433 115 aa10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 CCL8P80075 99 aa10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 IL11RAQ14626 422 aa10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 ZC2HC1BQ5TFG8 222 aa10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 OR13A1Q8NGR1 328 aa10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 DOCK8Q8NF50 2099 aa10.3□□□□□ -0.76
NEDD4L-208ENST00000456173 IGKV1-12A0A0C4DH73 117 aa10.29□□□□□ -0.76
NEDD4L-208ENST00000456173 IGKV1-5P01602 117 aa10.29□□□□□ -0.76
NEDD4L-208ENST00000456173 IGKV1D-12P01611 117 aa10.29□□□□□ -0.76
NEDD4L-208ENST00000456173 C19orf54Q5BKX5 351 aa10.29□□□□□ -0.76
NEDD4L-208ENST00000456173 OR10J6PQ8NGY7 276 aa10.29□□□□□ -0.76
NEDD4L-208ENST00000456173 IGLC7A0M8Q6 106 aa10.29□□□□□ -0.76
NEDD4L-208ENST00000456173 ZNRF1Q8ND25 227 aa10.29□□□□□ -0.76
NEDD4L-208ENST00000456173 OR9G1Q8NH87 305 aa10.29□□□□□ -0.76
NEDD4L-208ENST00000456173 ARPC1AQ92747 370 aa10.29□□□□□ -0.76
NEDD4L-208ENST00000456173 TMEM54Q969K7 222 aa10.29□□□□□ -0.76
NEDD4L-208ENST00000456173 ZNF581Q9P0T4 197 aa10.29□□□□□ -0.76
NEDD4L-208ENST00000456173 MRPS18CQ9Y3D5 142 aaKnown RBP10.29□□□□□ -0.76
NEDD4L-208ENST00000456173 A0A0G2JRQ6 117 aa10.29□□□□□ -0.76
NEDD4L-208ENST00000456173 CELA3AP09093 270 aa10.29□□□□□ -0.76
NEDD4L-208ENST00000456173 IDI2-AS1Q9NZ38 188 aa10.29□□□□□ -0.76
NEDD4L-208ENST00000456173 A0A1W2PPM0 123 aa10.29□□□□□ -0.76
NEDD4L-208ENST00000456173 QRFPP83859 136 aa10.29□□□□□ -0.76
NEDD4L-208ENST00000456173 RASL11AQ6T310 242 aa10.29□□□□□ -0.76
NEDD4L-208ENST00000456173 CHTOPQ9Y3Y2 248 aaKnown RBP10.29□□□□□ -0.76
NEDD4L-208ENST00000456173 SPEM2Q0P670 501 aa10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 SRSF6Q13247 344 aaKnown RBP10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 TMEM14EPQ6UXP3 125 aa10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 ZNF501Q96CX3 271 aaPredicted RBP10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 SDK2Q58EX2 2172 aa10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 NPIPB6E9PJ23 425 aa10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 NXT2Q9NPJ8 142 aaKnown RBP10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 PAPPA2Q9BXP8 1791 aa10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 H3BMG7 143 aa10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 ATP5IP56385 69 aaPredicted RBP10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 IGLV3-21P80748 117 aaPredicted RBP10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 ZNF56Q15929 161 aa10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 RPRMLQ8N4K4 120 aa10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 C9JAW5 83 aa10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 E9PQ18 207 aa10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 CD24P25063 80 aa10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 AMTNQ6UX39 209 aa10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 HAPLN4Q86UW8 402 aa10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 ITLN1Q8WWA0 313 aa10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 KLHDC3Q9BQ90 382 aa10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 ABCA1O95477 2261 aa10.28□□□□□ -0.76
NEDD4L-208ENST00000456173 PSMB11A5LHX3 300 aa10.27□□□□□ -0.76
NEDD4L-208ENST00000456173 YPEL3P61236 119 aaPredicted RBP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms