RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 IGLC7A0M8Q6 106 aa12.12□□□□□ -0.47
LDLR-202ENST00000455727 HELTA6NFD8 242 aa12.12□□□□□ -0.47
LDLR-202ENST00000455727 PPIAL4GP0DN37 164 aa12.12□□□□□ -0.47
LDLR-202ENST00000455727 DNLZQ5SXM8 178 aa12.12□□□□□ -0.47
LDLR-202ENST00000455727 ETFRF1Q6IPR1 90 aa12.12□□□□□ -0.47
LDLR-202ENST00000455727 OR1L4Q8NGR5 311 aa12.12□□□□□ -0.47
LDLR-202ENST00000455727 OR1P1Q8NH06 330 aa12.12□□□□□ -0.47
LDLR-202ENST00000455727 FAM167A-AS1Q96KT0 104 aa12.12□□□□□ -0.47
LDLR-202ENST00000455727 INSIG2Q9Y5U4 225 aa12.12□□□□□ -0.47
LDLR-202ENST00000455727 IGHV1-3A0A0C4DH29 117 aa12.11□□□□□ -0.47
LDLR-202ENST00000455727 A0A0U1RQK1 487 aa12.11□□□□□ -0.47
LDLR-202ENST00000455727 ZNF320A2RRD8 509 aa12.11□□□□□ -0.47
LDLR-202ENST00000455727 K7EN84 100 aa12.11□□□□□ -0.47
LDLR-202ENST00000455727 CRYGCP07315 174 aa12.11□□□□□ -0.47
LDLR-202ENST00000455727 RPL15P61313 204 aaKnown RBP12.11□□□□□ -0.47
LDLR-202ENST00000455727 NPIPB3Q92617 1050 aa12.11□□□□□ -0.47
LDLR-202ENST00000455727 NAV3Q8IVL0 2385 aa12.11□□□□□ -0.47
LDLR-202ENST00000455727 IGKV1D-37A0A075B6S9 117 aa12.11□□□□□ -0.47
LDLR-202ENST00000455727 ADORA2A-AS1P86434 159 aa12.11□□□□□ -0.47
LDLR-202ENST00000455727 PDZD11Q5EBL8 140 aa12.11□□□□□ -0.47
LDLR-202ENST00000455727 HIST1H2BLQ99880 126 aa12.11□□□□□ -0.47
LDLR-202ENST00000455727 SLC25A2Q9BXI2 301 aa12.11□□□□□ -0.47
LDLR-202ENST00000455727 AMMECR1Q9Y4X0 333 aaPredicted RBP12.11□□□□□ -0.47
LDLR-202ENST00000455727 ANKHD1Q8IWZ3 2542 aaKnown RBP12.11□□□□□ -0.47
LDLR-202ENST00000455727 IGHV3-72A0A0B4J1Y9 119 aa12.1□□□□□ -0.47
LDLR-202ENST00000455727 FABP4P15090 132 aa12.1□□□□□ -0.47
LDLR-202ENST00000455727 CRYBB3P26998 211 aa12.1□□□□□ -0.47
LDLR-202ENST00000455727 PAX2Q02962 417 aa12.1□□□□□ -0.47
LDLR-202ENST00000455727 LY6G5BQ8NDX9 201 aa12.1□□□□□ -0.47
LDLR-202ENST00000455727 RNF5Q99942 180 aa12.1□□□□□ -0.47
LDLR-202ENST00000455727 RAB1BQ9H0U4 201 aa12.1□□□□□ -0.47
LDLR-202ENST00000455727 IL36BQ9NZH7 164 aa12.1□□□□□ -0.47
LDLR-202ENST00000455727 SIGLEC9Q9Y336 463 aa12.1□□□□□ -0.47
LDLR-202ENST00000455727 XKRY2A2RUG3 117 aa12.1□□□□□ -0.47
LDLR-202ENST00000455727 GGTLC3B5MD39 225 aa12.1□□□□□ -0.47
LDLR-202ENST00000455727 RPL27AP46776 148 aaKnown RBP12.1□□□□□ -0.47
LDLR-202ENST00000455727 BPIFB3P59826 476 aa12.1□□□□□ -0.47
LDLR-202ENST00000455727 OR8B3Q8NGG8 313 aa12.1□□□□□ -0.47
LDLR-202ENST00000455727 OR8B2Q96RD0 313 aa12.1□□□□□ -0.47
LDLR-202ENST00000455727 PLXNB1O43157 2135 aa12.09□□□□□ -0.47
LDLR-202ENST00000455727 COX7A2P2O60397 106 aa12.09□□□□□ -0.47
LDLR-202ENST00000455727 OR10J4P0C629 311 aa12.09□□□□□ -0.47
LDLR-202ENST00000455727 COMPP49747 757 aaPredicted RBP12.09□□□□□ -0.47
LDLR-202ENST00000455727 GNG4P50150 75 aa12.09□□□□□ -0.47
LDLR-202ENST00000455727 SSBP2P81877 361 aaPredicted RBP12.09□□□□□ -0.47
LDLR-202ENST00000455727 NHLH1Q02575 133 aa12.09□□□□□ -0.47
LDLR-202ENST00000455727 C10orf113Q5VZT2 155 aa12.09□□□□□ -0.47
LDLR-202ENST00000455727 LY6LH3BQJ8 138 aa12.09□□□□□ -0.47
LDLR-202ENST00000455727 CORTO00230 105 aa12.09□□□□□ -0.47
LDLR-202ENST00000455727 SUMO1P63165 101 aaKnown RBP12.09□□□□□ -0.47
LDLR-202ENST00000455727 CENPWQ5EE01 88 aa12.09□□□□□ -0.47
LDLR-202ENST00000455727 PACRGQ96M98 296 aaPredicted RBP12.09□□□□□ -0.47
LDLR-202ENST00000455727 TRAPPC1Q9Y5R8 145 aa12.09□□□□□ -0.47
LDLR-202ENST00000455727 LIPFP07098 398 aa12.08□□□□□ -0.48
LDLR-202ENST00000455727 HNF1AP20823 631 aa12.08□□□□□ -0.48
LDLR-202ENST00000455727 YPEL3P61236 119 aaPredicted RBP12.08□□□□□ -0.48
LDLR-202ENST00000455727 ZNF90Q03938 601 aa12.08□□□□□ -0.48
LDLR-202ENST00000455727 CDSNQ15517 529 aa12.08□□□□□ -0.48
LDLR-202ENST00000455727 TNXAQ16473 311 aa12.08□□□□□ -0.48
LDLR-202ENST00000455727 MORN5Q5VZ52 161 aa12.08□□□□□ -0.48
LDLR-202ENST00000455727 CDPF1Q6NVV7 123 aa12.08□□□□□ -0.48
LDLR-202ENST00000455727 PATE2Q6UY27 113 aa12.08□□□□□ -0.48
LDLR-202ENST00000455727 PPP1R27Q86WC6 154 aa12.08□□□□□ -0.48
LDLR-202ENST00000455727 MRPL36Q9P0J6 103 aaKnown RBP12.08□□□□□ -0.48
LDLR-202ENST00000455727 REG1AP05451 166 aa12.08□□□□□ -0.48
LDLR-202ENST00000455727 RD3LP0DJH9 198 aa12.08□□□□□ -0.48
LDLR-202ENST00000455727 UBE2L3P68036 154 aaKnown RBP12.08□□□□□ -0.48
LDLR-202ENST00000455727 TMEM116Q8NCL8 245 aa12.08□□□□□ -0.48
LDLR-202ENST00000455727 OR5AU1Q8NGC0 362 aa12.08□□□□□ -0.48
LDLR-202ENST00000455727 RPEQ96AT9 228 aa12.08□□□□□ -0.48
LDLR-202ENST00000455727 TRGV9Q99603 122 aa12.08□□□□□ -0.48
LDLR-202ENST00000455727 ZNF355PQ9NSJ1 428 aa12.08□□□□□ -0.48
LDLR-202ENST00000455727 CBLN4Q9NTU7 201 aa12.08□□□□□ -0.48
LDLR-202ENST00000455727 TRAV5A0A0B4J249 113 aa12.07□□□□□ -0.48
LDLR-202ENST00000455727 GATCO43716 136 aaKnown RBP12.07□□□□□ -0.48
LDLR-202ENST00000455727 CNTFRP26992 372 aa12.07□□□□□ -0.48
LDLR-202ENST00000455727 CNN1P51911 297 aaKnown RBP12.07□□□□□ -0.48
LDLR-202ENST00000455727 MFAP2P55001 183 aa12.07□□□□□ -0.48
LDLR-202ENST00000455727 DLX1P56177 255 aa12.07□□□□□ -0.48
LDLR-202ENST00000455727 C22orf15Q8WYQ4 148 aa12.07□□□□□ -0.48
LDLR-202ENST00000455727 SPTA1P02549 2419 aa12.07□□□□□ -0.48
LDLR-202ENST00000455727 GCGP01275 180 aa12.06□□□□□ -0.48
LDLR-202ENST00000455727 TIGITQ495A1 244 aa12.06□□□□□ -0.48
LDLR-202ENST00000455727 HCP5Q6MZN7 132 aa12.06□□□□□ -0.48
LDLR-202ENST00000455727 STXBP6Q8NFX7 210 aa12.06□□□□□ -0.48
LDLR-202ENST00000455727 TIMD4Q96H15 378 aa12.06□□□□□ -0.48
LDLR-202ENST00000455727 PAXXQ9BUH6 204 aa12.06□□□□□ -0.48
LDLR-202ENST00000455727 OSTCQ9NRP0 149 aa12.06□□□□□ -0.48
LDLR-202ENST00000455727 TNFRSF19Q9NS68 423 aa12.06□□□□□ -0.48
LDLR-202ENST00000455727 V9GYV3 84 aa12.06□□□□□ -0.48
LDLR-202ENST00000455727 C22orf46C9J442 243 aa12.06□□□□□ -0.48
LDLR-202ENST00000455727 AMBPP02760 352 aa12.06□□□□□ -0.48
LDLR-202ENST00000455727 HIST1H1BP16401 226 aaKnown RBP12.06□□□□□ -0.48
LDLR-202ENST00000455727 COX7A1P24310 79 aa12.06□□□□□ -0.48
LDLR-202ENST00000455727 TAS2R60P59551 318 aa12.06□□□□□ -0.48
LDLR-202ENST00000455727 ERVFC1-1P60608 527 aa12.06□□□□□ -0.48
LDLR-202ENST00000455727 C9orf152Q5JTZ5 239 aa12.06□□□□□ -0.48
LDLR-202ENST00000455727 NEU4Q8WWR8 484 aaPredicted RBP12.06□□□□□ -0.48
LDLR-202ENST00000455727 MISP3Q96FF7 219 aa12.06□□□□□ -0.48
LDLR-202ENST00000455727 SRSF8Q9BRL6 282 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms