RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 SCGNO76038 276 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 NXPH3O95157 252 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 HOXA1P49639 335 aaPredicted RBP4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 TAS2R20P59543 309 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 PRCDQ00LT1 54 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 MLANAQ16655 118 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 TIGITQ495A1 244 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 PVRIGQ6DKI7 326 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 Q6ZNX1 250 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 LINC00336Q6ZUF6 198 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 HSD17B13Q7Z5P4 300 aaPredicted RBP4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 UBE2DNLQ8IWF7 75 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 SPARTQ8N0X7 666 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 ZBTB34Q8NCN2 500 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 DCANP1Q8TF63 244 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 BORCS5Q969J3 196 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 SEC22AQ96IW7 307 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 TMEM56Q96MV1 263 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 AIFM2Q9BRQ8 373 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 GINS3Q9BRX5 216 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 HRH4Q9H3N8 390 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 FNDC4Q9H6D8 234 aaPredicted RBP4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 PLA2G2EQ9NZK7 142 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 SSR3Q9UNL2 185 aa4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 DMBT1Q9UGM3 2413 aaPredicted RBP4.3□□□□□ -1.72
HLA-DPA3-207ENST00000454398 MYCBP2O75592 4640 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 A0A087WXM4 84 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 A0A0G2JRQ6 117 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 IGKV1-17P01599 117 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 IGKV1-5P01602 117 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 RNASE2P10153 161 aaKnown RBP4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 PRB4P10163 310 aaPredicted RBP4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 MIFP14174 115 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 FGF9P31371 208 aaPredicted RBP4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 OPRK1P41145 380 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 ALDH3B2P48448 385 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 EIF2B2P49770 351 aaKnown RBP4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 AKR1C2P52895 323 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 GABARAPL2P60520 117 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 LSM3P62310 102 aaKnown RBP4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 PAFAH1B2P68402 229 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 TMEM69Q5SWH9 247 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 GDF5OSQ5U4N7 250 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 ZNF600Q6ZNG1 722 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 H2BFWTQ7Z2G1 175 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 TPRA1Q86W33 373 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 SNX29P2Q8IUI4 249 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 CMTM1Q8IZ96 169 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 POM121L12Q8N7R1 296 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 SLC35G3Q8N808 338 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 SAMD12Q8N8I0 201 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 ZNF114Q8NC26 417 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 CSNK1G2-AS1Q8NCQ2 148 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 OR4A16Q8NH70 328 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 METTL26Q96S19 204 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 RNF126Q9BV68 326 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 ANAPC10Q9UM13 185 aa4.29□□□□□ -1.72
HLA-DPA3-207ENST00000454398 A0A0B4J293 547 aa4.28□□□□□ -1.72
HLA-DPA3-207ENST00000454398 HELTA6NFD8 242 aa4.28□□□□□ -1.72
HLA-DPA3-207ENST00000454398 FAM90A26D6RGX4 464 aa4.28□□□□□ -1.72
HLA-DPA3-207ENST00000454398 FGF2P09038 288 aa4.28□□□□□ -1.72
HLA-DPA3-207ENST00000454398 SPP1P10451 314 aa4.28□□□□□ -1.72
HLA-DPA3-207ENST00000454398 ETV6P41212 452 aa4.28□□□□□ -1.72
HLA-DPA3-207ENST00000454398 BCAP31P51572 246 aa4.28□□□□□ -1.72
HLA-DPA3-207ENST00000454398 TCTAP57738 103 aa4.28□□□□□ -1.72
HLA-DPA3-207ENST00000454398 TAS2R46P59540 309 aa4.28□□□□□ -1.72
HLA-DPA3-207ENST00000454398 DHRS2Q13268 280 aa4.28□□□□□ -1.72
HLA-DPA3-207ENST00000454398 USF2Q15853 346 aaPredicted RBP4.28□□□□□ -1.72
HLA-DPA3-207ENST00000454398 UBE2NLQ5JXB2 153 aa4.28□□□□□ -1.72
HLA-DPA3-207ENST00000454398 Q6ZRM9 215 aa4.28□□□□□ -1.72
HLA-DPA3-207ENST00000454398 CENPSQ8N2Z9 138 aa4.28□□□□□ -1.72
HLA-DPA3-207ENST00000454398 GLMPQ8WWB7 406 aa4.28□□□□□ -1.72
HLA-DPA3-207ENST00000454398 TP53RKQ96S44 253 aa4.28□□□□□ -1.72
HLA-DPA3-207ENST00000454398 ATP6V0BQ99437 205 aa4.28□□□□□ -1.72
HLA-DPA3-207ENST00000454398 NDUFAF3Q9BU61 184 aa4.28□□□□□ -1.72
HLA-DPA3-207ENST00000454398 DIABLOQ9NR28 239 aa4.28□□□□□ -1.72
HLA-DPA3-207ENST00000454398 C16orf90A8MZG2 172 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 IFNA10P01566 189 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 IFNA17P01571 189 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 P0C879 139 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 P0DMU3 169 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 FAM231AP0DMU4 169 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 FAM231CP0DMU5 169 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 PGAM2P15259 253 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 NPPCP23582 126 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 CRYBB3P26998 211 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 SNCAP37840 140 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 CBX5P45973 191 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 NPBWR1P48145 328 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 RND2P52198 227 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 HSPE1P61604 102 aaKnown RBP4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 TNP2Q05952 138 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 TRIM16LQ309B1 348 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 SP6Q3SY56 376 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 FAM222AQ5U5X8 452 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 GPR107Q5VW38 600 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 TMEM88Q6PEY1 159 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 Q6ZR54 194 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 LYSMD2Q8IV50 215 aa4.27□□□□□ -1.73
HLA-DPA3-207ENST00000454398 MAPKAPK5-AS1Q8N8E1 139 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms