RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 CSN3P07498 182 aa21.32■■□□□ 1
SMARCC1-203ENST00000454240 ADMP35318 185 aa21.32■■□□□ 1
SMARCC1-203ENST00000454240 OPRK1P41145 380 aa21.32■■□□□ 1
SMARCC1-203ENST00000454240 IAH1Q2TAA2 248 aaPredicted RBP21.32■■□□□ 1
SMARCC1-203ENST00000454240 SIGLEC8Q9NYZ4 499 aa21.32■■□□□ 1
SMARCC1-203ENST00000454240 PRAF2O60831 178 aa21.31■■□□□ 1
SMARCC1-203ENST00000454240 IAPPP10997 89 aa21.31■■□□□ 1
SMARCC1-203ENST00000454240 NKX2-1P43699 371 aaPredicted RBP21.31■■□□□ 1
SMARCC1-203ENST00000454240 ZBTB8BQ8NAP8 495 aaPredicted RBP21.31■■□□□ 1
SMARCC1-203ENST00000454240 CIB3Q96Q77 187 aaPredicted RBP21.31■■□□□ 1
SMARCC1-203ENST00000454240 GPN1Q9HCN4 374 aaPredicted RBP21.31■■□□□ 1
SMARCC1-203ENST00000454240 CCSO14618 274 aa21.3■■□□□ 1
SMARCC1-203ENST00000454240 SPNP16150 400 aa21.3■■□□□ 1
SMARCC1-203ENST00000454240 NPBWR1P48145 328 aa21.3■■□□□ 1
SMARCC1-203ENST00000454240 PALMDQ9NP74 551 aa21.3■■□□□ 1
SMARCC1-203ENST00000454240 MRPL36Q9P0J6 103 aaKnown RBP21.3■■□□□ 1
SMARCC1-203ENST00000454240 ZMAT5Q9UDW3 170 aaKnown RBP21.3■■□□□ 1
SMARCC1-203ENST00000454240 IGHV3-35A0A0C4DH35 117 aa21.29■■□□□ 1
SMARCC1-203ENST00000454240 RPS10-NUDT3A0A1W2PQS6 291 aa21.29■■□□□ 1
SMARCC1-203ENST00000454240 SNRPGP15A8MWD9 76 aa21.29■■□□□ 1
SMARCC1-203ENST00000454240 NUPL2O15504 423 aaKnown RBP21.29■■□□□ 1
SMARCC1-203ENST00000454240 GNG7O60262 68 aa21.29■■□□□ 1
SMARCC1-203ENST00000454240 UNQ9165/PRO28630Q6UXU0 137 aa21.29■■□□□ 1
SMARCC1-203ENST00000454240 OR4X1Q8NH49 305 aa21.29■■□□□ 1
SMARCC1-203ENST00000454240 ZNF414Q96IQ9 312 aa21.29■■□□□ 1
SMARCC1-203ENST00000454240 ZNF320A2RRD8 509 aa21.28■■□□□ 1
SMARCC1-203ENST00000454240 A8MWP6 167 aa21.28■■□□□ 1
SMARCC1-203ENST00000454240 WRBO00258 174 aa21.28■■□□□ 1
SMARCC1-203ENST00000454240 LY86O95711 162 aa21.28■■□□□ 1
SMARCC1-203ENST00000454240 PRB2P02812 416 aaPredicted RBP21.28■■□□□ 1
SMARCC1-203ENST00000454240 POLR2GP62487 172 aaKnown RBP eCLIP21.28■■□□□ 1
SMARCC1-203ENST00000454240 ADAMTSL5Q6ZMM2 481 aa21.28■■□□□ 1
SMARCC1-203ENST00000454240 AURKAIP1Q9NWT8 199 aaPredicted RBP21.28■■□□□ 1
SMARCC1-203ENST00000454240 C2orf70A6NJV1 201 aa21.27■■□□□ 1
SMARCC1-203ENST00000454240 C15orf62A8K5M9 175 aa21.27■■□□□ 1
SMARCC1-203ENST00000454240 NDUFA4O00483 81 aa21.27■■□□□ 1
SMARCC1-203ENST00000454240 TMEM50AO95807 157 aa21.27■■□□□ 1
SMARCC1-203ENST00000454240 IGLV1-51P01701 117 aa21.27■■□□□ 1
SMARCC1-203ENST00000454240 GSKIPQ9P0R6 139 aa21.27■■□□□ 1
SMARCC1-203ENST00000454240 CLN5O75503 358 aa21.26■□□□□ 0.99
SMARCC1-203ENST00000454240 PTTG1O95997 202 aa21.26■□□□□ 0.99
SMARCC1-203ENST00000454240 SLC25A4P12235 298 aa21.26■□□□□ 0.99
SMARCC1-203ENST00000454240 ETFRF1Q6IPR1 90 aa21.26■□□□□ 0.99
SMARCC1-203ENST00000454240 TMEM213A2RRL7 107 aa21.25■□□□□ 0.99
SMARCC1-203ENST00000454240 FAM25EA8MYX2 175 aa21.25■□□□□ 0.99
SMARCC1-203ENST00000454240 IFNA4P05014 189 aa21.25■□□□□ 0.99
SMARCC1-203ENST00000454240 RPP30P78346 268 aaKnown RBP21.25■□□□□ 0.99
SMARCC1-203ENST00000454240 RELQ04864 619 aaPredicted RBP21.25■□□□□ 0.99
SMARCC1-203ENST00000454240 CD69Q07108 199 aa21.25■□□□□ 0.99
SMARCC1-203ENST00000454240 PRSS54Q6PEW0 395 aa21.25■□□□□ 0.99
SMARCC1-203ENST00000454240 TMEM190Q8WZ59 177 aa21.25■□□□□ 0.99
SMARCC1-203ENST00000454240 C2orf50Q96LR7 162 aa21.25■□□□□ 0.99
SMARCC1-203ENST00000454240 SORL1Q92673 2214 aa21.24■□□□□ 0.99
SMARCC1-203ENST00000454240 C5orf51A6NDU8 294 aa21.24■□□□□ 0.99
SMARCC1-203ENST00000454240 FOLR2P14207 255 aa21.24■□□□□ 0.99
SMARCC1-203ENST00000454240 EDN2P20800 178 aa21.24■□□□□ 0.99
SMARCC1-203ENST00000454240 ELLP55199 621 aaPredicted RBP21.24■□□□□ 0.99
SMARCC1-203ENST00000454240 RAB11AP62491 216 aa21.24■□□□□ 0.99
SMARCC1-203ENST00000454240 HAPLN4Q86UW8 402 aa21.24■□□□□ 0.99
SMARCC1-203ENST00000454240 TMEM116Q8NCL8 245 aa21.24■□□□□ 0.99
SMARCC1-203ENST00000454240 UFC1Q9Y3C8 167 aa21.24■□□□□ 0.99
SMARCC1-203ENST00000454240 SCGB1D2O95969 90 aa21.23■□□□□ 0.99
SMARCC1-203ENST00000454240 MBPP02686 304 aaPredicted RBP21.23■□□□□ 0.99
SMARCC1-203ENST00000454240 CBLN1P23435 193 aa21.23■□□□□ 0.99
SMARCC1-203ENST00000454240 TM4SF20Q53R12 229 aa21.23■□□□□ 0.99
SMARCC1-203ENST00000454240 GSG1LQ6UXU4 331 aa21.23■□□□□ 0.99
SMARCC1-203ENST00000454240 SMIM8Q96KF7 97 aa21.23■□□□□ 0.99
SMARCC1-203ENST00000454240 SSSCA1O60232 199 aa21.22■□□□□ 0.99
SMARCC1-203ENST00000454240 GPX4P36969 197 aaPredicted RBP21.22■□□□□ 0.99
SMARCC1-203ENST00000454240 PAX9P55771 341 aa21.22■□□□□ 0.99
SMARCC1-203ENST00000454240 SPANXN5Q5MJ07 72 aa21.22■□□□□ 0.99
SMARCC1-203ENST00000454240 RCL1Q9Y2P8 373 aaKnown RBP21.22■□□□□ 0.99
SMARCC1-203ENST00000454240 TRAV30A0A087WSZ9 112 aa21.21■□□□□ 0.99
SMARCC1-203ENST00000454240 C8orf88P0DMB2 117 aa21.21■□□□□ 0.99
SMARCC1-203ENST00000454240 RND2P52198 227 aa21.21■□□□□ 0.99
SMARCC1-203ENST00000454240 IL15RAQ13261 267 aa21.21■□□□□ 0.99
SMARCC1-203ENST00000454240 SLC16A13Q7RTY0 426 aa21.21■□□□□ 0.99
SMARCC1-203ENST00000454240 CACNG8Q8WXS5 425 aa21.21■□□□□ 0.99
SMARCC1-203ENST00000454240 RAB40CQ96S21 281 aa21.21■□□□□ 0.99
SMARCC1-203ENST00000454240 PSENENQ9NZ42 101 aa21.21■□□□□ 0.99
SMARCC1-203ENST00000454240 ZNF256Q9Y2P7 627 aaPredicted RBP21.21■□□□□ 0.99
SMARCC1-203ENST00000454240 STRAPQ9Y3F4 350 aaKnown RBP21.21■□□□□ 0.99
SMARCC1-203ENST00000454240 WI2-2373I1.2A0A1W2PRP0 233 aa21.2■□□□□ 0.98
SMARCC1-203ENST00000454240 H3BP45 60 aa21.2■□□□□ 0.98
SMARCC1-203ENST00000454240 K7EMT4 169 aa21.2■□□□□ 0.98
SMARCC1-203ENST00000454240 NPIPB3Q92617 1050 aa21.2■□□□□ 0.98
SMARCC1-203ENST00000454240 MARC2Q969Z3 335 aa21.2■□□□□ 0.98
SMARCC1-203ENST00000454240 DAZ1Q9NQZ3 744 aaKnown RBP21.2■□□□□ 0.98
SMARCC1-203ENST00000454240 PAIP2BQ9ULR5 123 aaKnown RBP21.2■□□□□ 0.98
SMARCC1-203ENST00000454240 PRSS46E5RG02 174 aa21.19■□□□□ 0.98
SMARCC1-203ENST00000454240 IGKV1-17P01599 117 aa21.19■□□□□ 0.98
SMARCC1-203ENST00000454240 IGLC1P0CG04 106 aa21.19■□□□□ 0.98
SMARCC1-203ENST00000454240 TAS2R30P59541 319 aa21.19■□□□□ 0.98
SMARCC1-203ENST00000454240 DCTN2Q13561 401 aaKnown RBP21.19■□□□□ 0.98
SMARCC1-203ENST00000454240 ZNF600Q6ZNG1 722 aa21.19■□□□□ 0.98
SMARCC1-203ENST00000454240 MRPL27Q9P0M9 148 aaKnown RBP21.19■□□□□ 0.98
SMARCC1-203ENST00000454240 C7orf66A4D0T2 115 aa21.18■□□□□ 0.98
SMARCC1-203ENST00000454240 SCGB2A1O75556 95 aa21.18■□□□□ 0.98
SMARCC1-203ENST00000454240 DEFB114Q30KQ6 69 aa21.18■□□□□ 0.98
SMARCC1-203ENST00000454240 OR2K2Q8NGT1 345 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms