RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 ZNF688P0C7X2 276 aa17.23■□□□□ 0.35
LYSMD2-202ENST00000454181 OPRK1P41145 380 aa17.23■□□□□ 0.35
LYSMD2-202ENST00000454181 P2RY1P47900 373 aa17.23■□□□□ 0.35
LYSMD2-202ENST00000454181 HOXA1P49639 335 aaPredicted RBP17.23■□□□□ 0.35
LYSMD2-202ENST00000454181 COMMD3Q9UBI1 195 aa17.23■□□□□ 0.35
LYSMD2-202ENST00000454181 IGHV4-4A0A075B6R2 117 aa17.22■□□□□ 0.35
LYSMD2-202ENST00000454181 INS-IGF2F8WCM5 200 aa17.22■□□□□ 0.35
LYSMD2-202ENST00000454181 CLN5O75503 358 aa17.22■□□□□ 0.35
LYSMD2-202ENST00000454181 ETV6P41212 452 aa17.22■□□□□ 0.35
LYSMD2-202ENST00000454181 ACTL10Q5JWF8 245 aa17.22■□□□□ 0.35
LYSMD2-202ENST00000454181 Q6ZTC4 211 aa17.22■□□□□ 0.35
LYSMD2-202ENST00000454181 LINC00336Q6ZUF6 198 aa17.22■□□□□ 0.35
LYSMD2-202ENST00000454181 TBC1D24Q9ULP9 559 aa17.22■□□□□ 0.35
LYSMD2-202ENST00000454181 ZNF705EA8MWA4 302 aaPredicted RBP17.21■□□□□ 0.35
LYSMD2-202ENST00000454181 GIG44P09565 113 aaPredicted RBP17.21■□□□□ 0.35
LYSMD2-202ENST00000454181 CRYBB3P26998 211 aa17.21■□□□□ 0.35
LYSMD2-202ENST00000454181 KCTD21Q4G0X4 260 aa17.21■□□□□ 0.35
LYSMD2-202ENST00000454181 ZNF486Q96H40 463 aaPredicted RBP17.21■□□□□ 0.35
LYSMD2-202ENST00000454181 VCX3AQ9NNX9 186 aa17.21■□□□□ 0.35
LYSMD2-202ENST00000454181 A0A0B4J293 547 aa17.2■□□□□ 0.34
LYSMD2-202ENST00000454181 M0QYG6 137 aa17.2■□□□□ 0.34
LYSMD2-202ENST00000454181 IGKV1-5P01602 117 aa17.2■□□□□ 0.34
LYSMD2-202ENST00000454181 APOA1P02647 267 aa17.2■□□□□ 0.34
LYSMD2-202ENST00000454181 RNASE2P10153 161 aaKnown RBP17.2■□□□□ 0.34
LYSMD2-202ENST00000454181 PPP5CP53041 499 aa17.2■□□□□ 0.34
LYSMD2-202ENST00000454181 PIGPP57054 158 aa17.2■□□□□ 0.34
LYSMD2-202ENST00000454181 RND3P61587 244 aa17.2■□□□□ 0.34
LYSMD2-202ENST00000454181 TRIM16LQ309B1 348 aa17.2■□□□□ 0.34
LYSMD2-202ENST00000454181 OR4X1Q8NH49 305 aa17.2■□□□□ 0.34
LYSMD2-202ENST00000454181 RNASE11Q8TAA1 199 aaKnown RBP17.2■□□□□ 0.34
LYSMD2-202ENST00000454181 RRNAD1Q96FB5 475 aaKnown RBP17.2■□□□□ 0.34
LYSMD2-202ENST00000454181 RNF126Q9BV68 326 aa17.2■□□□□ 0.34
LYSMD2-202ENST00000454181 CLEC5AQ9NY25 188 aa17.2■□□□□ 0.34
LYSMD2-202ENST00000454181 VPS13DQ5THJ4 4388 aa17.19■□□□□ 0.34
LYSMD2-202ENST00000454181 TRAV30A0A087WSZ9 112 aa17.19■□□□□ 0.34
LYSMD2-202ENST00000454181 PI3P19957 117 aa17.19■□□□□ 0.34
LYSMD2-202ENST00000454181 C4BPBP20851 252 aa17.19■□□□□ 0.34
LYSMD2-202ENST00000454181 PVRIGQ6DKI7 326 aa17.19■□□□□ 0.34
LYSMD2-202ENST00000454181 HECTD4Q9Y4D8 3996 aa17.19■□□□□ 0.34
LYSMD2-202ENST00000454181 ELOA3CA0A087WX78 387 aaPredicted RBP17.18■□□□□ 0.34
LYSMD2-202ENST00000454181 HELTA6NFD8 242 aa17.18■□□□□ 0.34
LYSMD2-202ENST00000454181 RPL5P46777 297 aaKnown RBP17.18■□□□□ 0.34
LYSMD2-202ENST00000454181 AP2S1P53680 142 aaPredicted RBP17.18■□□□□ 0.34
LYSMD2-202ENST00000454181 DHRS2Q13268 280 aa17.18■□□□□ 0.34
LYSMD2-202ENST00000454181 TP53RKQ96S44 253 aa17.18■□□□□ 0.34
LYSMD2-202ENST00000454181 X6R8D5 127 aa17.18■□□□□ 0.34
LYSMD2-202ENST00000454181 C3orf85A0A1B0GTC6 90 aa17.17■□□□□ 0.34
LYSMD2-202ENST00000454181 RPS10-NUDT3A0A1W2PQS6 291 aa17.17■□□□□ 0.34
LYSMD2-202ENST00000454181 NUTF2P61970 127 aaKnown RBP17.17■□□□□ 0.34
LYSMD2-202ENST00000454181 MLANAQ16655 118 aa17.17■□□□□ 0.34
LYSMD2-202ENST00000454181 TIGITQ495A1 244 aa17.17■□□□□ 0.34
LYSMD2-202ENST00000454181 RNASE10Q5GAN6 216 aaKnown RBP17.17■□□□□ 0.34
LYSMD2-202ENST00000454181 DCANP1Q8TF63 244 aa17.17■□□□□ 0.34
LYSMD2-202ENST00000454181 FNDC4Q9H6D8 234 aaPredicted RBP17.17■□□□□ 0.34
LYSMD2-202ENST00000454181 MRPL36Q9P0J6 103 aaKnown RBP17.17■□□□□ 0.34
LYSMD2-202ENST00000454181 COPZ2Q9P299 210 aa17.17■□□□□ 0.34
LYSMD2-202ENST00000454181 DEFB131BA0A096LNP1 70 aa17.16■□□□□ 0.34
LYSMD2-202ENST00000454181 P0C879 139 aa17.16■□□□□ 0.34
LYSMD2-202ENST00000454181 PSMG4Q5JS54 123 aa17.16■□□□□ 0.34
LYSMD2-202ENST00000454181 Q8WTZ3 238 aa17.16■□□□□ 0.34
LYSMD2-202ENST00000454181 YIPF6Q96EC8 236 aa17.16■□□□□ 0.34
LYSMD2-202ENST00000454181 RAB40CQ96S21 281 aa17.16■□□□□ 0.34
LYSMD2-202ENST00000454181 C1QTNF4Q9BXJ3 329 aa17.16■□□□□ 0.34
LYSMD2-202ENST00000454181 NPY1RP25929 384 aa17.15■□□□□ 0.34
LYSMD2-202ENST00000454181 CCDC71LQ8N9Z2 235 aa17.15■□□□□ 0.34
LYSMD2-202ENST00000454181 IGKV1-17P01599 117 aa17.14■□□□□ 0.33
LYSMD2-202ENST00000454181 P0DMU3 169 aa17.14■□□□□ 0.33
LYSMD2-202ENST00000454181 FAM231AP0DMU4 169 aa17.14■□□□□ 0.33
LYSMD2-202ENST00000454181 FAM231CP0DMU5 169 aa17.14■□□□□ 0.33
LYSMD2-202ENST00000454181 SNRPD3P62318 126 aaKnown RBP17.14■□□□□ 0.33
LYSMD2-202ENST00000454181 SP6Q3SY56 376 aa17.14■□□□□ 0.33
LYSMD2-202ENST00000454181 RNASE12Q5GAN4 147 aaKnown RBP17.14■□□□□ 0.33
LYSMD2-202ENST00000454181 ARRDC1Q8N5I2 433 aa17.14■□□□□ 0.33
LYSMD2-202ENST00000454181 CSNK1G2-AS1Q8NCQ2 148 aa17.14■□□□□ 0.33
LYSMD2-202ENST00000454181 ZFAND1Q8TCF1 268 aa17.14■□□□□ 0.33
LYSMD2-202ENST00000454181 AGRNO00468 2067 aa17.14■□□□□ 0.33
LYSMD2-202ENST00000454181 HPGDSO60760 199 aa17.13■□□□□ 0.33
LYSMD2-202ENST00000454181 HNRNPCP07910 306 aaKnown RBP eCLIP17.13■□□□□ 0.33
LYSMD2-202ENST00000454181 ELK1P19419 428 aa17.13■□□□□ 0.33
LYSMD2-202ENST00000454181 HTR2BP41595 481 aa17.13■□□□□ 0.33
LYSMD2-202ENST00000454181 ZNF767PQ75MW2 155 aa17.13■□□□□ 0.33
LYSMD2-202ENST00000454181 OR1S2Q8NGQ3 325 aa17.13■□□□□ 0.33
LYSMD2-202ENST00000454181 NDUFAF3Q9BU61 184 aa17.13■□□□□ 0.33
LYSMD2-202ENST00000454181 HEYLQ9NQ87 328 aaPredicted RBP17.13■□□□□ 0.33
LYSMD2-202ENST00000454181 FAM25AB3EWG3 89 aa17.12■□□□□ 0.33
LYSMD2-202ENST00000454181 FAM25CB3EWG5 89 aa17.12■□□□□ 0.33
LYSMD2-202ENST00000454181 FAM25GB3EWG6 89 aa17.12■□□□□ 0.33
LYSMD2-202ENST00000454181 AMBPP02760 352 aa17.12■□□□□ 0.33
LYSMD2-202ENST00000454181 SPCS3P61009 180 aa17.12■□□□□ 0.33
LYSMD2-202ENST00000454181 C12orf74Q32Q52 190 aa17.12■□□□□ 0.33
LYSMD2-202ENST00000454181 LHFPL1Q86WI0 220 aa17.12■□□□□ 0.33
LYSMD2-202ENST00000454181 POM121L12Q8N7R1 296 aa17.12■□□□□ 0.33
LYSMD2-202ENST00000454181 CELA1Q9UNI1 258 aa17.12■□□□□ 0.33
LYSMD2-202ENST00000454181 A0A087WXM4 84 aa17.11■□□□□ 0.33
LYSMD2-202ENST00000454181 MZT2AQ6P582 158 aa17.11■□□□□ 0.33
LYSMD2-202ENST00000454181 C16orf54Q6UWD8 224 aa17.11■□□□□ 0.33
LYSMD2-202ENST00000454181 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.11■□□□□ 0.33
LYSMD2-202ENST00000454181 XCL2Q9UBD3 114 aa17.11■□□□□ 0.33
LYSMD2-202ENST00000454181 KLK11Q9UBX7 282 aa17.11■□□□□ 0.33
LYSMD2-202ENST00000454181 U3KQE9 123 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms