RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 RND3P61587 244 aa7.93□□□□□ -1.14
USP1-204ENST00000452143 RPL11P62913 178 aaKnown RBP7.93□□□□□ -1.14
USP1-204ENST00000452143 MORN3Q6PF18 240 aaPredicted RBP7.93□□□□□ -1.14
USP1-204ENST00000452143 TRPT1Q86TN4 253 aaKnown RBP7.93□□□□□ -1.14
USP1-204ENST00000452143 SLC35G3Q8N808 338 aa7.93□□□□□ -1.14
USP1-204ENST00000452143 GRAMD2BQ96HH9 432 aa7.93□□□□□ -1.14
USP1-204ENST00000452143 METTL26Q96S19 204 aa7.93□□□□□ -1.14
USP1-204ENST00000452143 PDCD10Q9BUL8 212 aa7.93□□□□□ -1.14
USP1-204ENST00000452143 VCX3AQ9NNX9 186 aa7.93□□□□□ -1.14
USP1-204ENST00000452143 FAT2Q9NYQ8 4349 aa7.92□□□□□ -1.14
USP1-204ENST00000452143 PKHD1P08F94 4074 aa7.92□□□□□ -1.14
USP1-204ENST00000452143 A0A1B0GU03 582 aa7.92□□□□□ -1.14
USP1-204ENST00000452143 ZNF705EA8MWA4 302 aaPredicted RBP7.92□□□□□ -1.14
USP1-204ENST00000452143 DEFB4AO15263 64 aa7.92□□□□□ -1.14
USP1-204ENST00000452143 TMEM50AO95807 157 aa7.92□□□□□ -1.14
USP1-204ENST00000452143 P0C879 139 aa7.92□□□□□ -1.14
USP1-204ENST00000452143 NPPCP23582 126 aa7.92□□□□□ -1.14
USP1-204ENST00000452143 LILRB2Q8N423 598 aa7.92□□□□□ -1.14
USP1-204ENST00000452143 FAM24BQ8N5W8 94 aa7.92□□□□□ -1.14
USP1-204ENST00000452143 YIPF6Q96EC8 236 aa7.92□□□□□ -1.14
USP1-204ENST00000452143 NARS2Q96I59 477 aaKnown RBP7.92□□□□□ -1.14
USP1-204ENST00000452143 RABAC1Q9UI14 185 aa7.92□□□□□ -1.14
USP1-204ENST00000452143 APLNQ9ULZ1 77 aa7.92□□□□□ -1.14
USP1-204ENST00000452143 DNAH2Q9P225 4427 aa7.92□□□□□ -1.14
USP1-204ENST00000452143 A0A0B4J293 547 aa7.91□□□□□ -1.14
USP1-204ENST00000452143 IGHV4-28A0A0C4DH34 117 aa7.91□□□□□ -1.14
USP1-204ENST00000452143 IGHV3-66A0A0C4DH42 116 aa7.91□□□□□ -1.14
USP1-204ENST00000452143 IGLL5B9A064 214 aa7.91□□□□□ -1.14
USP1-204ENST00000452143 K7EQG2 157 aa7.91□□□□□ -1.14
USP1-204ENST00000452143 CLN5O75503 358 aa7.91□□□□□ -1.14
USP1-204ENST00000452143 IFNA17P01571 189 aa7.91□□□□□ -1.14
USP1-204ENST00000452143 IGKV1-5P01602 117 aa7.91□□□□□ -1.14
USP1-204ENST00000452143 RNASE2P10153 161 aaKnown RBP7.91□□□□□ -1.14
USP1-204ENST00000452143 CRYBB3P26998 211 aa7.91□□□□□ -1.14
USP1-204ENST00000452143 OPRK1P41145 380 aa7.91□□□□□ -1.14
USP1-204ENST00000452143 RPL5P46777 297 aaKnown RBP7.91□□□□□ -1.14
USP1-204ENST00000452143 P2RY1P47900 373 aa7.91□□□□□ -1.14
USP1-204ENST00000452143 EIF2B2P49770 351 aaKnown RBP7.91□□□□□ -1.14
USP1-204ENST00000452143 LSM3P62310 102 aaKnown RBP7.91□□□□□ -1.14
USP1-204ENST00000452143 SPINK9Q5DT21 86 aa7.91□□□□□ -1.14
USP1-204ENST00000452143 LHFPL1Q86WI0 220 aa7.91□□□□□ -1.14
USP1-204ENST00000452143 SNX29P2Q8IUI4 249 aa7.91□□□□□ -1.14
USP1-204ENST00000452143 CENPSQ8N2Z9 138 aa7.91□□□□□ -1.14
USP1-204ENST00000452143 ARRDC1Q8N5I2 433 aa7.91□□□□□ -1.14
USP1-204ENST00000452143 STXBP6Q8NFX7 210 aa7.91□□□□□ -1.14
USP1-204ENST00000452143 OR4X1Q8NH49 305 aa7.91□□□□□ -1.14
USP1-204ENST00000452143 TRAV30A0A087WSZ9 112 aa7.9□□□□□ -1.14
USP1-204ENST00000452143 TRAV10A0A0B4J240 114 aa7.9□□□□□ -1.14
USP1-204ENST00000452143 HELTA6NFD8 242 aa7.9□□□□□ -1.14
USP1-204ENST00000452143 B3GALNT1O75752 331 aa7.9□□□□□ -1.14
USP1-204ENST00000452143 GIG44P09565 113 aaPredicted RBP7.9□□□□□ -1.14
USP1-204ENST00000452143 PGAM2P15259 253 aa7.9□□□□□ -1.14
USP1-204ENST00000452143 TBPP20226 339 aa7.9□□□□□ -1.14
USP1-204ENST00000452143 C4BPBP20851 252 aa7.9□□□□□ -1.14
USP1-204ENST00000452143 HOXA1P49639 335 aaPredicted RBP7.9□□□□□ -1.14
USP1-204ENST00000452143 PIGPP57054 158 aa7.9□□□□□ -1.14
USP1-204ENST00000452143 IZUMO4Q1ZYL8 232 aa7.9□□□□□ -1.14
USP1-204ENST00000452143 BSXQ3C1V8 233 aa7.9□□□□□ -1.14
USP1-204ENST00000452143 RNASE10Q5GAN6 216 aaKnown RBP7.9□□□□□ -1.14
USP1-204ENST00000452143 DCANP1Q8TF63 244 aa7.9□□□□□ -1.14
USP1-204ENST00000452143 TP53RKQ96S44 253 aa7.9□□□□□ -1.14
USP1-204ENST00000452143 ENY2Q9NPA8 101 aa7.9□□□□□ -1.14
USP1-204ENST00000452143 COMMD3Q9UBI1 195 aa7.9□□□□□ -1.14
USP1-204ENST00000452143 C3orf85A0A1B0GTC6 90 aa7.89□□□□□ -1.15
USP1-204ENST00000452143 M0QYG6 137 aa7.89□□□□□ -1.15
USP1-204ENST00000452143 AMBPP02760 352 aa7.89□□□□□ -1.15
USP1-204ENST00000452143 ZNF688P0C7X2 276 aa7.89□□□□□ -1.15
USP1-204ENST00000452143 RBMY1A1P0DJD3 496 aaKnown RBP7.89□□□□□ -1.15
USP1-204ENST00000452143 RBMY1CP0DJD4 496 aa7.89□□□□□ -1.15
USP1-204ENST00000452143 HLA-DMBP28068 263 aa7.89□□□□□ -1.15
USP1-204ENST00000452143 RBMY1FQ15415 496 aaKnown RBP7.89□□□□□ -1.15
USP1-204ENST00000452143 AARDQ4LEZ3 155 aa7.89□□□□□ -1.15
USP1-204ENST00000452143 Q6ZTC4 211 aa7.89□□□□□ -1.15
USP1-204ENST00000452143 LINC00336Q6ZUF6 198 aa7.89□□□□□ -1.15
USP1-204ENST00000452143 CCDC71LQ8N9Z2 235 aa7.89□□□□□ -1.15
USP1-204ENST00000452143 RRNAD1Q96FB5 475 aaKnown RBP7.89□□□□□ -1.15
USP1-204ENST00000452143 FNDC4Q9H6D8 234 aaPredicted RBP7.89□□□□□ -1.15
USP1-204ENST00000452143 TBC1D24Q9ULP9 559 aa7.89□□□□□ -1.15
USP1-204ENST00000452143 X6R8D5 127 aa7.89□□□□□ -1.15
USP1-204ENST00000452143 DNAH17Q9UFH2 4485 aa7.88□□□□□ -1.15
USP1-204ENST00000452143 IGHV4-4A0A075B6R2 117 aa7.88□□□□□ -1.15
USP1-204ENST00000452143 A0A087WXM4 84 aa7.88□□□□□ -1.15
USP1-204ENST00000452143 RPS10-NUDT3A0A1W2PQS6 291 aa7.88□□□□□ -1.15
USP1-204ENST00000452143 IGKV1-17P01599 117 aa7.88□□□□□ -1.15
USP1-204ENST00000452143 ELK1P19419 428 aa7.88□□□□□ -1.15
USP1-204ENST00000452143 PI3P19957 117 aa7.88□□□□□ -1.15
USP1-204ENST00000452143 UCP1P25874 307 aa7.88□□□□□ -1.15
USP1-204ENST00000452143 ETV6P41212 452 aa7.88□□□□□ -1.15
USP1-204ENST00000452143 AP2S1P53680 142 aaPredicted RBP7.88□□□□□ -1.15
USP1-204ENST00000452143 TRIM16LQ309B1 348 aa7.88□□□□□ -1.15
USP1-204ENST00000452143 FAM219AQ8IW50 185 aa7.88□□□□□ -1.15
USP1-204ENST00000452143 CSNK1G2-AS1Q8NCQ2 148 aa7.88□□□□□ -1.15
USP1-204ENST00000452143 TMEM230Q96A57 120 aa7.88□□□□□ -1.15
USP1-204ENST00000452143 RNF126Q9BV68 326 aa7.88□□□□□ -1.15
USP1-204ENST00000452143 C1QTNF4Q9BXJ3 329 aa7.88□□□□□ -1.15
USP1-204ENST00000452143 MRPL36Q9P0J6 103 aaKnown RBP7.88□□□□□ -1.15
USP1-204ENST00000452143 COPZ2Q9P299 210 aa7.88□□□□□ -1.15
USP1-204ENST00000452143 HPGDSO60760 199 aa7.87□□□□□ -1.15
USP1-204ENST00000452143 TNFAIP8O95379 198 aa7.87□□□□□ -1.15
USP1-204ENST00000452143 CD3DP04234 171 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms