RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 KIR2DL5BA0A0G2JN68 375 aa9.23□□□□□ -0.93
CPSF4-208ENST00000452047 KIR2DL5BA0A0G2JPC4 375 aa9.23□□□□□ -0.93
CPSF4-208ENST00000452047 TEX13DA0A0J9YY54 714 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-208ENST00000452047 ANKRD20A5PA0PJZ0 165 aa9.23□□□□□ -0.93
CPSF4-208ENST00000452047 CRYM-AS1A6NIL9 109 aa9.23□□□□□ -0.93
CPSF4-208ENST00000452047 DISC1C4P0D8 188 aa9.23□□□□□ -0.93
CPSF4-208ENST00000452047 H3BMQ9 156 aa9.23□□□□□ -0.93
CPSF4-208ENST00000452047 GSTZ1O43708 216 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-208ENST00000452047 APOC4P55056 127 aa9.23□□□□□ -0.93
CPSF4-208ENST00000452047 ZNF600Q6ZNG1 722 aa9.23□□□□□ -0.93
CPSF4-208ENST00000452047 WFDC3Q8IUB2 231 aa9.23□□□□□ -0.93
CPSF4-208ENST00000452047 KIR2DL5AQ8N109 375 aa9.23□□□□□ -0.93
CPSF4-208ENST00000452047 DUSP18Q8NEJ0 188 aa9.23□□□□□ -0.93
CPSF4-208ENST00000452047 OR51S1Q8NGJ8 323 aa9.23□□□□□ -0.93
CPSF4-208ENST00000452047 KIR2DL5BQ8NHK3 375 aa9.23□□□□□ -0.93
CPSF4-208ENST00000452047 RNASE11Q8TAA1 199 aaKnown RBP9.23□□□□□ -0.93
CPSF4-208ENST00000452047 SOSTQ9BQB4 213 aa9.23□□□□□ -0.93
CPSF4-208ENST00000452047 GINS3Q9BRX5 216 aa9.23□□□□□ -0.93
CPSF4-208ENST00000452047 C6orf62Q9GZU0 229 aaPredicted RBP9.23□□□□□ -0.93
CPSF4-208ENST00000452047 VSIRQ9H7M9 311 aa9.23□□□□□ -0.93
CPSF4-208ENST00000452047 TP53TG1Q9Y2A0 90 aa9.23□□□□□ -0.93
CPSF4-208ENST00000452047 PUS1Q9Y606 427 aaKnown RBP eCLIP9.23□□□□□ -0.93
CPSF4-208ENST00000452047 HYDINQ4G0P3 5121 aa9.22□□□□□ -0.93
CPSF4-208ENST00000452047 IGHV3OR16-13A0A075B7E8 117 aa9.22□□□□□ -0.93
CPSF4-208ENST00000452047 IGHV3-74A0A0B4J1X5 117 aa9.22□□□□□ -0.93
CPSF4-208ENST00000452047 A0A1B0GU03 582 aa9.22□□□□□ -0.93
CPSF4-208ENST00000452047 TMEM50AO95807 157 aa9.22□□□□□ -0.93
CPSF4-208ENST00000452047 APOHP02749 345 aaPredicted RBP9.22□□□□□ -0.93
CPSF4-208ENST00000452047 SUB1P53999 127 aaKnown RBP eCLIP9.22□□□□□ -0.93
CPSF4-208ENST00000452047 SPCS3P61009 180 aa9.22□□□□□ -0.93
CPSF4-208ENST00000452047 DHODHQ02127 395 aa9.22□□□□□ -0.93
CPSF4-208ENST00000452047 DEFB135Q30KP9 77 aa9.22□□□□□ -0.93
CPSF4-208ENST00000452047 APRG1Q8IVJ8 170 aa9.22□□□□□ -0.93
CPSF4-208ENST00000452047 SELENOHQ8IZQ5 122 aaKnown RBP9.22□□□□□ -0.93
CPSF4-208ENST00000452047 OR4X1Q8NH49 305 aa9.22□□□□□ -0.93
CPSF4-208ENST00000452047 OR52E5Q8NH55 327 aa9.22□□□□□ -0.93
CPSF4-208ENST00000452047 ST8SIA2Q92186 375 aa9.22□□□□□ -0.93
CPSF4-208ENST00000452047 TMEM230Q96A57 120 aa9.22□□□□□ -0.93
CPSF4-208ENST00000452047 PRRT1Q99946 306 aa9.22□□□□□ -0.93
CPSF4-208ENST00000452047 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.22□□□□□ -0.93
CPSF4-208ENST00000452047 TMEM56-RWDD3S4R434 201 aa9.22□□□□□ -0.93
CPSF4-208ENST00000452047 UBE2CO00762 179 aa9.21□□□□□ -0.94
CPSF4-208ENST00000452047 CLN5O75503 358 aa9.21□□□□□ -0.94
CPSF4-208ENST00000452047 TNFSF8P32971 234 aa9.21□□□□□ -0.94
CPSF4-208ENST00000452047 OPRK1P41145 380 aa9.21□□□□□ -0.94
CPSF4-208ENST00000452047 ZNF124Q15973 351 aa9.21□□□□□ -0.94
CPSF4-208ENST00000452047 MLANAQ16655 118 aa9.21□□□□□ -0.94
CPSF4-208ENST00000452047 TMEM268Q5VZI3 342 aa9.21□□□□□ -0.94
CPSF4-208ENST00000452047 TCF24Q7RTU0 167 aa9.21□□□□□ -0.94
CPSF4-208ENST00000452047 LILRB2Q8N423 598 aa9.21□□□□□ -0.94
CPSF4-208ENST00000452047 GPR146Q96CH1 333 aa9.21□□□□□ -0.94
CPSF4-208ENST00000452047 GALNT14Q96FL9 552 aa9.21□□□□□ -0.94
CPSF4-208ENST00000452047 MAP6D1Q9H9H5 199 aa9.21□□□□□ -0.94
CPSF4-208ENST00000452047 ENY2Q9NPA8 101 aa9.21□□□□□ -0.94
CPSF4-208ENST00000452047 CACNG5Q9UF02 275 aa9.21□□□□□ -0.94
CPSF4-208ENST00000452047 ALMS1Q8TCU4 4167 aa9.2□□□□□ -0.94
CPSF4-208ENST00000452047 IGKV3-7A0A075B6H7 116 aa9.2□□□□□ -0.94
CPSF4-208ENST00000452047 SPRY2O43597 315 aa9.2□□□□□ -0.94
CPSF4-208ENST00000452047 IGKV1-17P01599 117 aa9.2□□□□□ -0.94
CPSF4-208ENST00000452047 CD5P06127 495 aa9.2□□□□□ -0.94
CPSF4-208ENST00000452047 RPL35AP18077 110 aaKnown RBP9.2□□□□□ -0.94
CPSF4-208ENST00000452047 BMI1P35226 326 aa9.2□□□□□ -0.94
CPSF4-208ENST00000452047 HTR2BP41595 481 aa9.2□□□□□ -0.94
CPSF4-208ENST00000452047 TFPI2P48307 235 aa9.2□□□□□ -0.94
CPSF4-208ENST00000452047 EWSR1Q01844 656 aaKnown RBP eCLIP9.2□□□□□ -0.94
CPSF4-208ENST00000452047 TNFRSF9Q07011 255 aa9.2□□□□□ -0.94
CPSF4-208ENST00000452047 GBGT1Q8N5D6 347 aa9.2□□□□□ -0.94
CPSF4-208ENST00000452047 TMEM170AQ8WVE7 144 aa9.2□□□□□ -0.94
CPSF4-208ENST00000452047 RNF183Q96D59 192 aa9.2□□□□□ -0.94
CPSF4-208ENST00000452047 A0A0J9YWU9 116 aa9.19□□□□□ -0.94
CPSF4-208ENST00000452047 DFFBO76075 338 aa9.19□□□□□ -0.94
CPSF4-208ENST00000452047 SUPT4H1P63272 117 aaKnown RBP9.19□□□□□ -0.94
CPSF4-208ENST00000452047 TMEM187Q14656 261 aa9.19□□□□□ -0.94
CPSF4-208ENST00000452047 C2orf83Q53S99 150 aa9.19□□□□□ -0.94
CPSF4-208ENST00000452047 LYG2Q86SG7 212 aa9.19□□□□□ -0.94
CPSF4-208ENST00000452047 STPG3Q8N7X2 389 aa9.19□□□□□ -0.94
CPSF4-208ENST00000452047 MCFD2Q8NI22 146 aa9.19□□□□□ -0.94
CPSF4-208ENST00000452047 IL22RA2Q969J5 263 aa9.19□□□□□ -0.94
CPSF4-208ENST00000452047 MS4A6AQ9H2W1 248 aa9.19□□□□□ -0.94
CPSF4-208ENST00000452047 PRR13Q9NZ81 148 aa9.19□□□□□ -0.94
CPSF4-208ENST00000452047 SCP2D1Q9UJQ7 156 aa9.19□□□□□ -0.94
CPSF4-208ENST00000452047 TRAV2A0A0B4J234 112 aa9.18□□□□□ -0.94
CPSF4-208ENST00000452047 IGHV3-66A0A0C4DH42 116 aa9.18□□□□□ -0.94
CPSF4-208ENST00000452047 FABP12A6NFH5 140 aa9.18□□□□□ -0.94
CPSF4-208ENST00000452047 CRYBB3P26998 211 aa9.18□□□□□ -0.94
CPSF4-208ENST00000452047 CMC4P56277 68 aaPredicted RBP9.18□□□□□ -0.94
CPSF4-208ENST00000452047 PAFAH1B2P68402 229 aa9.18□□□□□ -0.94
CPSF4-208ENST00000452047 NMSQ5H8A3 153 aa9.18□□□□□ -0.94
CPSF4-208ENST00000452047 SLC24A4Q8NFF2 622 aa9.18□□□□□ -0.94
CPSF4-208ENST00000452047 RNASEH2CQ8TDP1 164 aaKnown RBP9.18□□□□□ -0.94
CPSF4-208ENST00000452047 TRIM63Q969Q1 353 aa9.18□□□□□ -0.94
CPSF4-208ENST00000452047 HEYLQ9NQ87 328 aaPredicted RBP9.18□□□□□ -0.94
CPSF4-208ENST00000452047 MCUBQ9NWR8 336 aa9.18□□□□□ -0.94
CPSF4-208ENST00000452047 EPPK1P58107 5090 aaKnown RBP9.17□□□□□ -0.94
CPSF4-208ENST00000452047 A0A1B0GVG6 124 aa9.17□□□□□ -0.94
CPSF4-208ENST00000452047 RPS10-NUDT3A0A1W2PQS6 291 aa9.17□□□□□ -0.94
CPSF4-208ENST00000452047 CEBPZOSA8MTT3 80 aa9.17□□□□□ -0.94
CPSF4-208ENST00000452047 JTBO76095 146 aa9.17□□□□□ -0.94
CPSF4-208ENST00000452047 IGLC1P0CG04 106 aa9.17□□□□□ -0.94
CPSF4-208ENST00000452047 SULT1A3P0DMM9 295 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms