RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 ZNF114Q8NC26 417 aa6.46□□□□□ -1.38
RFX3-209ENST00000451859 OR4C16Q8NGL9 310 aa6.46□□□□□ -1.38
RFX3-209ENST00000451859 DYNC2LI1Q8TCX1 351 aa6.46□□□□□ -1.38
RFX3-209ENST00000451859 RAB2BQ8WUD1 216 aa6.46□□□□□ -1.38
RFX3-209ENST00000451859 SMIM4Q8WVI0 70 aa6.46□□□□□ -1.38
RFX3-209ENST00000451859 RNF2Q99496 336 aa6.46□□□□□ -1.38
RFX3-209ENST00000451859 ENY2Q9NPA8 101 aa6.46□□□□□ -1.38
RFX3-209ENST00000451859 PRR13Q9NZ81 148 aa6.46□□□□□ -1.38
RFX3-209ENST00000451859 DNAH1Q9P2D7 4330 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 IGHV7-4-1A0A0J9YVY3 117 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 C15orf62A8K5M9 175 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 K7EMT4 169 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 TSPAN4O14817 238 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 ATG12O94817 140 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 P0C879 139 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 AKAIN1P0CW23 69 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 RNASE2P10153 161 aaKnown RBP6.45□□□□□ -1.38
RFX3-209ENST00000451859 UCP1P25874 307 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 MRPS10P82664 201 aaKnown RBP6.45□□□□□ -1.38
RFX3-209ENST00000451859 MEF2DQ14814 521 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 DEFB135Q30KP9 77 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 ODF3L2Q3SX64 289 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 TMEM268Q5VZI3 342 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 APRG1Q8IVJ8 170 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 TMEM116Q8NCL8 245 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 DUSP18Q8NEJ0 188 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 OR51S1Q8NGJ8 323 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 LHFPL5Q8TAF8 219 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 ZNF414Q96IQ9 312 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 RTBDNQ9BSG5 229 aaPredicted RBP6.45□□□□□ -1.38
RFX3-209ENST00000451859 RHPN1-AS1Q9BWJ2 59 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 NXF2Q9GZY0 626 aaKnown RBP6.45□□□□□ -1.38
RFX3-209ENST00000451859 NAA60Q9H7X0 242 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 MCUBQ9NWR8 336 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 CCDC59Q9P031 241 aaKnown RBP6.45□□□□□ -1.38
RFX3-209ENST00000451859 SMPXQ9UHP9 88 aa6.45□□□□□ -1.38
RFX3-209ENST00000451859 TRAV14DV4A0A0A6YYC5 116 aa6.44□□□□□ -1.38
RFX3-209ENST00000451859 LCE6AA0A183 80 aa6.44□□□□□ -1.38
RFX3-209ENST00000451859 OR4C46A6NHA9 309 aa6.44□□□□□ -1.38
RFX3-209ENST00000451859 CHEK1O14757 476 aa6.44□□□□□ -1.38
RFX3-209ENST00000451859 OPRK1P41145 380 aa6.44□□□□□ -1.38
RFX3-209ENST00000451859 NPBWR1P48145 328 aa6.44□□□□□ -1.38
RFX3-209ENST00000451859 SUB1P53999 127 aaKnown RBP eCLIP6.44□□□□□ -1.38
RFX3-209ENST00000451859 APOC4P55056 127 aa6.44□□□□□ -1.38
RFX3-209ENST00000451859 TMBIM6P55061 237 aa6.44□□□□□ -1.38
RFX3-209ENST00000451859 RPL11P62913 178 aaKnown RBP6.44□□□□□ -1.38
RFX3-209ENST00000451859 SSBP1Q04837 148 aaKnown RBP6.44□□□□□ -1.38
RFX3-209ENST00000451859 PMS2P11Q13670 270 aa6.44□□□□□ -1.38
RFX3-209ENST00000451859 MLANAQ16655 118 aa6.44□□□□□ -1.38
RFX3-209ENST00000451859 TOMM20LQ6UXN7 152 aa6.44□□□□□ -1.38
RFX3-209ENST00000451859 Q6ZRM9 215 aa6.44□□□□□ -1.38
RFX3-209ENST00000451859 ST8SIA2Q92186 375 aa6.44□□□□□ -1.38
RFX3-209ENST00000451859 ATP6V0BQ99437 205 aa6.44□□□□□ -1.38
RFX3-209ENST00000451859 TXN2Q99757 166 aa6.44□□□□□ -1.38
RFX3-209ENST00000451859 TMEM222Q9H0R3 208 aa6.44□□□□□ -1.38
RFX3-209ENST00000451859 MRPL36Q9P0J6 103 aaKnown RBP6.44□□□□□ -1.38
RFX3-209ENST00000451859 CACNG5Q9UF02 275 aa6.44□□□□□ -1.38
RFX3-209ENST00000451859 A0A1B0GU03 582 aa6.43□□□□□ -1.38
RFX3-209ENST00000451859 CCDC160A6NGH7 325 aa6.43□□□□□ -1.38
RFX3-209ENST00000451859 CRYM-AS1A6NIL9 109 aa6.43□□□□□ -1.38
RFX3-209ENST00000451859 CEBPZOSA8MTT3 80 aa6.43□□□□□ -1.38
RFX3-209ENST00000451859 H3BMQ9 156 aa6.43□□□□□ -1.38
RFX3-209ENST00000451859 APOHP02749 345 aaPredicted RBP6.43□□□□□ -1.38
RFX3-209ENST00000451859 FCGR2BP31994 310 aaPredicted RBP6.43□□□□□ -1.38
RFX3-209ENST00000451859 KRTAP5-3Q6L8H2 238 aa6.43□□□□□ -1.38
RFX3-209ENST00000451859 ZNF600Q6ZNG1 722 aa6.43□□□□□ -1.38
RFX3-209ENST00000451859 TCF24Q7RTU0 167 aa6.43□□□□□ -1.38
RFX3-209ENST00000451859 SELENOHQ8IZQ5 122 aaKnown RBP6.43□□□□□ -1.38
RFX3-209ENST00000451859 MCFD2Q8NI22 146 aa6.43□□□□□ -1.38
RFX3-209ENST00000451859 GLYATL2Q8WU03 294 aa6.43□□□□□ -1.38
RFX3-209ENST00000451859 RBPMSQ93062 196 aaKnown RBP6.43□□□□□ -1.38
RFX3-209ENST00000451859 PRRT1Q99946 306 aa6.43□□□□□ -1.38
RFX3-209ENST00000451859 OVOL2Q9BRP0 275 aa6.43□□□□□ -1.38
RFX3-209ENST00000451859 GINS3Q9BRX5 216 aa6.43□□□□□ -1.38
RFX3-209ENST00000451859 SLIRPQ9GZT3 109 aaKnown RBP6.43□□□□□ -1.38
RFX3-209ENST00000451859 FNDC4Q9H6D8 234 aaPredicted RBP6.43□□□□□ -1.38
RFX3-209ENST00000451859 HEYLQ9NQ87 328 aaPredicted RBP6.43□□□□□ -1.38
RFX3-209ENST00000451859 PUS1Q9Y606 427 aaKnown RBP eCLIP6.43□□□□□ -1.38
RFX3-209ENST00000451859 A0A0J9YWU9 116 aa6.42□□□□□ -1.38
RFX3-209ENST00000451859 ANKRD20A5PA0PJZ0 165 aa6.42□□□□□ -1.38
RFX3-209ENST00000451859 FABP12A6NFH5 140 aa6.42□□□□□ -1.38
RFX3-209ENST00000451859 CORTO00230 105 aa6.42□□□□□ -1.38
RFX3-209ENST00000451859 CTDSPLO15194 276 aa6.42□□□□□ -1.38
RFX3-209ENST00000451859 SPRY2O43597 315 aa6.42□□□□□ -1.38
RFX3-209ENST00000451859 B3GALNT1O75752 331 aa6.42□□□□□ -1.38
RFX3-209ENST00000451859 CDS2O95674 445 aa6.42□□□□□ -1.38
RFX3-209ENST00000451859 TMEM50AO95807 157 aa6.42□□□□□ -1.38
RFX3-209ENST00000451859 AKR1C4P17516 323 aa6.42□□□□□ -1.38
RFX3-209ENST00000451859 TNFSF8P32971 234 aa6.42□□□□□ -1.38
RFX3-209ENST00000451859 RPL5P46777 297 aaKnown RBP6.42□□□□□ -1.38
RFX3-209ENST00000451859 SPCS3P61009 180 aa6.42□□□□□ -1.38
RFX3-209ENST00000451859 DHODHQ02127 395 aa6.42□□□□□ -1.38
RFX3-209ENST00000451859 SURF2Q15527 256 aaPredicted RBP6.42□□□□□ -1.38
RFX3-209ENST00000451859 TIGITQ495A1 244 aa6.42□□□□□ -1.38
RFX3-209ENST00000451859 LEMD1Q68G75 181 aa6.42□□□□□ -1.38
RFX3-209ENST00000451859 FAM219AQ8IW50 185 aa6.42□□□□□ -1.38
RFX3-209ENST00000451859 STPG3Q8N7X2 389 aa6.42□□□□□ -1.38
RFX3-209ENST00000451859 IL17DQ8TAD2 202 aa6.42□□□□□ -1.38
RFX3-209ENST00000451859 TMEM230Q96A57 120 aa6.42□□□□□ -1.38
RFX3-209ENST00000451859 GPR146Q96CH1 333 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms