RNA–Protein interactions for RNA: ENST00000451070.1

LINC01238-204, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 4

Gene LINC01238, Length 599 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-204ENST00000451070 NHLH2Q02577 135 aa7.38□□□□□ -1.23
LINC01238-204ENST00000451070 IDNKQ5T6J7 187 aa7.38□□□□□ -1.23
LINC01238-204ENST00000451070 OR10W1Q8NGF6 305 aa7.38□□□□□ -1.23
LINC01238-204ENST00000451070 OR52B4Q8NGK2 314 aa7.38□□□□□ -1.23
LINC01238-204ENST00000451070 CXorf58Q96LI9 332 aa7.38□□□□□ -1.23
LINC01238-204ENST00000451070 GGTLC1Q9BX51 225 aa7.38□□□□□ -1.23
LINC01238-204ENST00000451070 TMEM140Q9NV12 185 aa7.38□□□□□ -1.23
LINC01238-204ENST00000451070 KCNIP3Q9Y2W7 256 aa7.38□□□□□ -1.23
LINC01238-204ENST00000451070 TRAV25A0A0B4J276 109 aa7.37□□□□□ -1.23
LINC01238-204ENST00000451070 A0A1W2PPQ1 181 aa7.37□□□□□ -1.23
LINC01238-204ENST00000451070 MEIS3P1A6NDR6 274 aa7.37□□□□□ -1.23
LINC01238-204ENST00000451070 ELLP55199 621 aaPredicted RBP7.37□□□□□ -1.23
LINC01238-204ENST00000451070 CATR1Q13166 79 aa7.37□□□□□ -1.23
LINC01238-204ENST00000451070 ZNF585BQ52M93 769 aa7.37□□□□□ -1.23
LINC01238-204ENST00000451070 SPANXN2Q5MJ10 180 aa7.37□□□□□ -1.23
LINC01238-204ENST00000451070 TMEM17Q86X19 198 aa7.37□□□□□ -1.23
LINC01238-204ENST00000451070 OR5AP2Q8NGF4 316 aa7.37□□□□□ -1.23
LINC01238-204ENST00000451070 OR51H1Q8NH63 302 aa7.37□□□□□ -1.23
LINC01238-204ENST00000451070 SRSF8Q9BRL6 282 aaKnown RBP7.37□□□□□ -1.23
LINC01238-204ENST00000451070 QTRT1Q9BXR0 403 aaKnown RBP7.37□□□□□ -1.23
LINC01238-204ENST00000451070 COMMD5Q9GZQ3 224 aa7.37□□□□□ -1.23
LINC01238-204ENST00000451070 TMPRSS5Q9H3S3 457 aa7.37□□□□□ -1.23
LINC01238-204ENST00000451070 PLEKHA2Q9HB19 425 aa7.37□□□□□ -1.23
LINC01238-204ENST00000451070 TREM1Q9NP99 234 aa7.37□□□□□ -1.23
LINC01238-204ENST00000451070 MRPL27Q9P0M9 148 aaKnown RBP7.37□□□□□ -1.23
LINC01238-204ENST00000451070 LOC102724200A0A096LPH7 203 aaPredicted RBP7.36□□□□□ -1.23
LINC01238-204ENST00000451070 C5orf52A6NGY3 159 aa7.36□□□□□ -1.23
LINC01238-204ENST00000451070 TGOLN2O43493 480 aa7.36□□□□□ -1.23
LINC01238-204ENST00000451070 TMEM127O75204 238 aa7.36□□□□□ -1.23
LINC01238-204ENST00000451070 RPA2P15927 270 aa7.36□□□□□ -1.23
LINC01238-204ENST00000451070 GNRHRP30968 328 aa7.36□□□□□ -1.23
LINC01238-204ENST00000451070 CDKN1BP46527 198 aa7.36□□□□□ -1.23
LINC01238-204ENST00000451070 MFAP2P55001 183 aa7.36□□□□□ -1.23
LINC01238-204ENST00000451070 RAB5BP61020 215 aa7.36□□□□□ -1.23
LINC01238-204ENST00000451070 WT1-ASQ06250 92 aa7.36□□□□□ -1.23
LINC01238-204ENST00000451070 ANKRD55Q3KP44 614 aa7.36□□□□□ -1.23
LINC01238-204ENST00000451070 RNASE10Q5GAN6 216 aaKnown RBP7.36□□□□□ -1.23
LINC01238-204ENST00000451070 PLET1Q6UQ28 207 aa7.36□□□□□ -1.23
LINC01238-204ENST00000451070 SMIM15Q7Z3B0 74 aa7.36□□□□□ -1.23
LINC01238-204ENST00000451070 NRARPQ7Z6K4 114 aa7.36□□□□□ -1.23
LINC01238-204ENST00000451070 CCDC190Q86UF4 302 aa7.36□□□□□ -1.23
LINC01238-204ENST00000451070 ARRDC1Q8N5I2 433 aa7.36□□□□□ -1.23
LINC01238-204ENST00000451070 OR1L6Q8NGR2 347 aa7.36□□□□□ -1.23
LINC01238-204ENST00000451070 VN1R17PQ8TDU5 208 aa7.36□□□□□ -1.23
LINC01238-204ENST00000451070 TMEM190Q8WZ59 177 aa7.36□□□□□ -1.23
LINC01238-204ENST00000451070 NARS2Q96I59 477 aaKnown RBP7.36□□□□□ -1.23
LINC01238-204ENST00000451070 TBC1D24Q9ULP9 559 aa7.36□□□□□ -1.23
LINC01238-204ENST00000451070 TEX50A0A1B0GTY4 177 aa7.35□□□□□ -1.23
LINC01238-204ENST00000451070 OR2T8A6NH00 312 aa7.35□□□□□ -1.23
LINC01238-204ENST00000451070 F8W735 103 aaPredicted RBP7.35□□□□□ -1.23
LINC01238-204ENST00000451070 XRCC3O43542 346 aa7.35□□□□□ -1.23
LINC01238-204ENST00000451070 SERPINE2P07093 398 aa7.35□□□□□ -1.23
LINC01238-204ENST00000451070 OR13C7P0DN81 318 aa7.35□□□□□ -1.23
LINC01238-204ENST00000451070 TGFBR1P36897 503 aa7.35□□□□□ -1.23
LINC01238-204ENST00000451070 RFX2P48378 723 aa7.35□□□□□ -1.23
LINC01238-204ENST00000451070 EWSR1Q01844 656 aaKnown RBP eCLIP7.35□□□□□ -1.23
LINC01238-204ENST00000451070 AADACL3Q5VUY0 350 aa7.35□□□□□ -1.23
LINC01238-204ENST00000451070 DHRS11Q6UWP2 260 aa7.35□□□□□ -1.23
LINC01238-204ENST00000451070 RBPMS2Q6ZRY4 209 aaKnown RBP7.35□□□□□ -1.23
LINC01238-204ENST00000451070 CD300LFQ8TDQ1 290 aa7.35□□□□□ -1.23
LINC01238-204ENST00000451070 ZNF431Q8TF32 576 aaPredicted RBP7.35□□□□□ -1.23
LINC01238-204ENST00000451070 ZNF414Q96IQ9 312 aa7.35□□□□□ -1.23
LINC01238-204ENST00000451070 CHRDL1Q9BU40 450 aa7.35□□□□□ -1.23
LINC01238-204ENST00000451070 NKX6-2Q9C056 277 aaPredicted RBP7.35□□□□□ -1.23
LINC01238-204ENST00000451070 C5orf66Q9H5L9 145 aa7.35□□□□□ -1.23
LINC01238-204ENST00000451070 NDUFA4L2Q9NRX3 87 aa7.35□□□□□ -1.23
LINC01238-204ENST00000451070 EHFQ9NZC4 300 aa7.35□□□□□ -1.23
LINC01238-204ENST00000451070 COMMD9Q9P000 198 aa7.35□□□□□ -1.23
LINC01238-204ENST00000451070 THYN1Q9P016 225 aa7.35□□□□□ -1.23
LINC01238-204ENST00000451070 ANAPC10Q9UM13 185 aa7.35□□□□□ -1.23
LINC01238-204ENST00000451070 UFC1Q9Y3C8 167 aa7.35□□□□□ -1.23
LINC01238-204ENST00000451070 IGHV3-21A0A0B4J1V1 117 aa7.34□□□□□ -1.23
LINC01238-204ENST00000451070 PGLYRP1O75594 196 aaPredicted RBP7.34□□□□□ -1.23
LINC01238-204ENST00000451070 RLN1P04808 185 aa7.34□□□□□ -1.23
LINC01238-204ENST00000451070 ANXA7P20073 488 aaKnown RBP7.34□□□□□ -1.23
LINC01238-204ENST00000451070 F2RP25116 425 aa7.34□□□□□ -1.23
LINC01238-204ENST00000451070 ADMP35318 185 aa7.34□□□□□ -1.23
LINC01238-204ENST00000451070 RAB2AP61019 212 aa7.34□□□□□ -1.23
LINC01238-204ENST00000451070 HERV-K104P61576 105 aa7.34□□□□□ -1.23
LINC01238-204ENST00000451070 RRAS2P62070 204 aaPredicted RBP7.34□□□□□ -1.23
LINC01238-204ENST00000451070 ODF3L2Q3SX64 289 aa7.34□□□□□ -1.23
LINC01238-204ENST00000451070 MRPL52Q86TS9 123 aaKnown RBP7.34□□□□□ -1.23
LINC01238-204ENST00000451070 WFDC3Q8IUB2 231 aa7.34□□□□□ -1.23
LINC01238-204ENST00000451070 OR2C3Q8N628 320 aa7.34□□□□□ -1.23
LINC01238-204ENST00000451070 OR1L8Q8NGR8 309 aa7.34□□□□□ -1.23
LINC01238-204ENST00000451070 STOML3Q8TAV4 291 aa7.34□□□□□ -1.23
LINC01238-204ENST00000451070 FCAMRQ8WWV6 532 aa7.34□□□□□ -1.23
LINC01238-204ENST00000451070 LINC00476Q8WZB0 136 aa7.34□□□□□ -1.23
LINC01238-204ENST00000451070 MOB3AQ96BX8 217 aa7.34□□□□□ -1.23
LINC01238-204ENST00000451070 RRNAD1Q96FB5 475 aaKnown RBP7.34□□□□□ -1.23
LINC01238-204ENST00000451070 BSCL2Q96G97 398 aaPredicted RBP7.34□□□□□ -1.23
LINC01238-204ENST00000451070 SPAG8Q99932 426 aaPredicted RBP7.34□□□□□ -1.23
LINC01238-204ENST00000451070 SRRQ9GZT4 340 aa7.34□□□□□ -1.23
LINC01238-204ENST00000451070 FXYD6Q9H0Q3 95 aa7.34□□□□□ -1.23
LINC01238-204ENST00000451070 DAZ1Q9NQZ3 744 aaKnown RBP7.34□□□□□ -1.23
LINC01238-204ENST00000451070 NSG2Q9Y328 171 aa7.34□□□□□ -1.23
LINC01238-204ENST00000451070 GOLT1BQ9Y3E0 138 aa7.34□□□□□ -1.23
LINC01238-204ENST00000451070 F11RQ9Y624 299 aaKnown RBP7.34□□□□□ -1.23
LINC01238-204ENST00000451070 IGHV3OR16-8A0A075B7F1 116 aa7.33□□□□□ -1.24
LINC01238-204ENST00000451070 A0A0J9YWU9 116 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms