RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 TMEM231Q9H6L2 316 aa11.95□□□□□ -0.5
SGCE-208ENST00000450385 TENM2Q9NT68 2774 aa11.94□□□□□ -0.5
SGCE-208ENST00000450385 TRAV2A0A0B4J234 112 aa11.94□□□□□ -0.5
SGCE-208ENST00000450385 TMEM50AO95807 157 aa11.94□□□□□ -0.5
SGCE-208ENST00000450385 OR5AC1P0C628 307 aa11.94□□□□□ -0.5
SGCE-208ENST00000450385 RNASE2P10153 161 aaKnown RBP11.94□□□□□ -0.5
SGCE-208ENST00000450385 TNFSF8P32971 234 aa11.94□□□□□ -0.5
SGCE-208ENST00000450385 FAUP35544 74 aaKnown RBP11.94□□□□□ -0.5
SGCE-208ENST00000450385 ETV6P41212 452 aa11.94□□□□□ -0.5
SGCE-208ENST00000450385 HOXA1P49639 335 aaPredicted RBP11.94□□□□□ -0.5
SGCE-208ENST00000450385 ATP5IP56385 69 aaPredicted RBP11.94□□□□□ -0.5
SGCE-208ENST00000450385 AP3S2P59780 193 aa11.94□□□□□ -0.5
SGCE-208ENST00000450385 SELENOHQ8IZQ5 122 aaKnown RBP11.94□□□□□ -0.5
SGCE-208ENST00000450385 OR51S1Q8NGJ8 323 aa11.94□□□□□ -0.5
SGCE-208ENST00000450385 OR4X1Q8NH49 305 aa11.94□□□□□ -0.5
SGCE-208ENST00000450385 WFDC10AQ9H1F0 79 aa11.94□□□□□ -0.5
SGCE-208ENST00000450385 A0A1W2PS18 150 aa11.93□□□□□ -0.5
SGCE-208ENST00000450385 CLN5O75503 358 aa11.93□□□□□ -0.5
SGCE-208ENST00000450385 ANXA3P12429 323 aa11.93□□□□□ -0.5
SGCE-208ENST00000450385 SRPXP78539 464 aa11.93□□□□□ -0.5
SGCE-208ENST00000450385 IZUMO4Q1ZYL8 232 aa11.93□□□□□ -0.5
SGCE-208ENST00000450385 FAM90A2PQ658T7 463 aa11.93□□□□□ -0.5
SGCE-208ENST00000450385 MCFD2Q8NI22 146 aa11.93□□□□□ -0.5
SGCE-208ENST00000450385 RNASEH2CQ8TDP1 164 aaKnown RBP11.93□□□□□ -0.5
SGCE-208ENST00000450385 VSIRQ9H7M9 311 aa11.93□□□□□ -0.5
SGCE-208ENST00000450385 RYR3Q15413 4870 aa11.93□□□□□ -0.5
SGCE-208ENST00000450385 DFFBO76075 338 aa11.92□□□□□ -0.5
SGCE-208ENST00000450385 SLC25A4P12235 298 aa11.92□□□□□ -0.5
SGCE-208ENST00000450385 ATF4P18848 351 aaPredicted RBP11.92□□□□□ -0.5
SGCE-208ENST00000450385 C2orf83Q53S99 150 aa11.92□□□□□ -0.5
SGCE-208ENST00000450385 ETFRF1Q6IPR1 90 aa11.92□□□□□ -0.5
SGCE-208ENST00000450385 TOMM20LQ6UXN7 152 aa11.92□□□□□ -0.5
SGCE-208ENST00000450385 Q6ZRM9 215 aa11.92□□□□□ -0.5
SGCE-208ENST00000450385 RNF2Q99496 336 aa11.92□□□□□ -0.5
SGCE-208ENST00000450385 ZNF701M0R085 212 aaPredicted RBP11.91□□□□□ -0.5
SGCE-208ENST00000450385 SULT1A3P0DMM9 295 aa11.91□□□□□ -0.5
SGCE-208ENST00000450385 SULT1A4P0DMN0 295 aa11.91□□□□□ -0.5
SGCE-208ENST00000450385 NPPCP23582 126 aa11.91□□□□□ -0.5
SGCE-208ENST00000450385 OPRK1P41145 380 aa11.91□□□□□ -0.5
SGCE-208ENST00000450385 TMEM268Q5VZI3 342 aa11.91□□□□□ -0.5
SGCE-208ENST00000450385 FAAP20Q6NZ36 180 aa11.91□□□□□ -0.5
SGCE-208ENST00000450385 STPG3Q8N7X2 389 aa11.91□□□□□ -0.5
SGCE-208ENST00000450385 NARS2Q96I59 477 aaKnown RBP11.91□□□□□ -0.5
SGCE-208ENST00000450385 ZNF414Q96IQ9 312 aa11.91□□□□□ -0.5
SGCE-208ENST00000450385 OVOL2Q9BRP0 275 aa11.91□□□□□ -0.5
SGCE-208ENST00000450385 HEYLQ9NQ87 328 aaPredicted RBP11.91□□□□□ -0.5
SGCE-208ENST00000450385 U3KQ87 197 aa11.91□□□□□ -0.5
SGCE-208ENST00000450385 STARD9Q9P2P6 4700 aa11.9□□□□□ -0.5
SGCE-208ENST00000450385 A0A0B4J2A0 478 aa11.9□□□□□ -0.5
SGCE-208ENST00000450385 A0A0G2JRQ6 117 aa11.9□□□□□ -0.5
SGCE-208ENST00000450385 DUXBA0A1W2PPF3 345 aa11.9□□□□□ -0.5
SGCE-208ENST00000450385 ZNF207O43670 478 aaKnown RBP11.9□□□□□ -0.5
SGCE-208ENST00000450385 S100A5P33763 92 aa11.9□□□□□ -0.5
SGCE-208ENST00000450385 CCR6P51684 374 aa11.9□□□□□ -0.5
SGCE-208ENST00000450385 TMEM187Q14656 261 aa11.9□□□□□ -0.5
SGCE-208ENST00000450385 ODF3L2Q3SX64 289 aa11.9□□□□□ -0.5
SGCE-208ENST00000450385 SPINK9Q5DT21 86 aa11.9□□□□□ -0.5
SGCE-208ENST00000450385 NMSQ5H8A3 153 aa11.9□□□□□ -0.5
SGCE-208ENST00000450385 LHFPL5Q8TAF8 219 aa11.9□□□□□ -0.5
SGCE-208ENST00000450385 GPR146Q96CH1 333 aa11.9□□□□□ -0.5
SGCE-208ENST00000450385 SLC25A21Q9BQT8 299 aaPredicted RBP11.9□□□□□ -0.5
SGCE-208ENST00000450385 CACNG5Q9UF02 275 aa11.9□□□□□ -0.5
SGCE-208ENST00000450385 SHPKQ9UHJ6 478 aa11.9□□□□□ -0.5
SGCE-208ENST00000450385 PUS1Q9Y606 427 aaKnown RBP eCLIP11.9□□□□□ -0.5
SGCE-208ENST00000450385 LCE6AA0A183 80 aa11.89□□□□□ -0.51
SGCE-208ENST00000450385 SPRY2O43597 315 aa11.89□□□□□ -0.51
SGCE-208ENST00000450385 CRYBB3P26998 211 aa11.89□□□□□ -0.51
SGCE-208ENST00000450385 LGI3Q8N145 548 aa11.89□□□□□ -0.51
SGCE-208ENST00000450385 OR1S2Q8NGQ3 325 aa11.89□□□□□ -0.51
SGCE-208ENST00000450385 METTL26Q96S19 204 aa11.89□□□□□ -0.51
SGCE-208ENST00000450385 ZFAND3Q9H8U3 227 aa11.89□□□□□ -0.51
SGCE-208ENST00000450385 MCUBQ9NWR8 336 aa11.89□□□□□ -0.51
SGCE-208ENST00000450385 DYNC2H1Q8NCM8 4307 aaKnown RBP11.88□□□□□ -0.51
SGCE-208ENST00000450385 IGHV3OR16-8A0A075B7F1 116 aa11.88□□□□□ -0.51
SGCE-208ENST00000450385 A0A1B0GU03 582 aa11.88□□□□□ -0.51
SGCE-208ENST00000450385 CEBPZOSA8MTT3 80 aa11.88□□□□□ -0.51
SGCE-208ENST00000450385 IGHV3-48P01763 117 aa11.88□□□□□ -0.51
SGCE-208ENST00000450385 EIF2B2P49770 351 aaKnown RBP11.88□□□□□ -0.51
SGCE-208ENST00000450385 YPEL3P61236 119 aaPredicted RBP11.88□□□□□ -0.51
SGCE-208ENST00000450385 TNFRSF9Q07011 255 aa11.88□□□□□ -0.51
SGCE-208ENST00000450385 SMCO1Q147U7 214 aa11.88□□□□□ -0.51
SGCE-208ENST00000450385 TMEM128Q5BJH2 165 aa11.88□□□□□ -0.51
SGCE-208ENST00000450385 ZFAND6Q6FIF0 208 aa11.88□□□□□ -0.51
SGCE-208ENST00000450385 TMEM230Q96A57 120 aa11.88□□□□□ -0.51
SGCE-208ENST00000450385 RNF183Q96D59 192 aa11.88□□□□□ -0.51
SGCE-208ENST00000450385 FNDC4Q9H6D8 234 aaPredicted RBP11.88□□□□□ -0.51
SGCE-208ENST00000450385 MAP6D1Q9H9H5 199 aa11.88□□□□□ -0.51
SGCE-208ENST00000450385 RETNQ9HD89 108 aa11.88□□□□□ -0.51
SGCE-208ENST00000450385 SELENOKQ9Y6D0 94 aa11.88□□□□□ -0.51
SGCE-208ENST00000450385 DNASE2O00115 360 aaPredicted RBP11.87□□□□□ -0.51
SGCE-208ENST00000450385 SLC25A6P12236 298 aa11.87□□□□□ -0.51
SGCE-208ENST00000450385 AP2S1P53680 142 aaPredicted RBP11.87□□□□□ -0.51
SGCE-208ENST00000450385 TCF24Q7RTU0 167 aa11.87□□□□□ -0.51
SGCE-208ENST00000450385 TOMM5Q8N4H5 51 aa11.87□□□□□ -0.51
SGCE-208ENST00000450385 TMEM217Q8N7C4 229 aa11.87□□□□□ -0.51
SGCE-208ENST00000450385 SLC24A4Q8NFF2 622 aa11.87□□□□□ -0.51
SGCE-208ENST00000450385 Q8WTZ3 238 aa11.87□□□□□ -0.51
SGCE-208ENST00000450385 GATAD1Q8WUU5 269 aa11.87□□□□□ -0.51
SGCE-208ENST00000450385 GRAMD2BQ96HH9 432 aa11.87□□□□□ -0.51
SGCE-208ENST00000450385 CSTL1Q9H114 145 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms