RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 ST8SIA2Q92186 375 aa9.13□□□□□ -0.95
MSH5-209ENST00000450148 RBPMSQ93062 196 aaKnown RBP9.13□□□□□ -0.95
MSH5-209ENST00000450148 GPR146Q96CH1 333 aa9.13□□□□□ -0.95
MSH5-209ENST00000450148 RRNAD1Q96FB5 475 aaKnown RBP9.13□□□□□ -0.95
MSH5-209ENST00000450148 RABL2AQ9UBK7 228 aaPredicted RBP9.13□□□□□ -0.95
MSH5-209ENST00000450148 RABL2BQ9UNT1 228 aa9.13□□□□□ -0.95
MSH5-209ENST00000450148 C14orf166Q9Y224 244 aaKnown RBP9.13□□□□□ -0.95
MSH5-209ENST00000450148 TP53TG1Q9Y2A0 90 aa9.13□□□□□ -0.95
MSH5-209ENST00000450148 PUS1Q9Y606 427 aaKnown RBP eCLIP9.13□□□□□ -0.95
MSH5-209ENST00000450148 TMEM56-RWDD3S4R434 201 aa9.13□□□□□ -0.95
MSH5-209ENST00000450148 AGRNO00468 2067 aa9.12□□□□□ -0.95
MSH5-209ENST00000450148 DNAH1Q9P2D7 4330 aa9.12□□□□□ -0.95
MSH5-209ENST00000450148 KIR2DL5BA0A0G2JN68 375 aa9.12□□□□□ -0.95
MSH5-209ENST00000450148 KIR2DL5BA0A0G2JPC4 375 aa9.12□□□□□ -0.95
MSH5-209ENST00000450148 CORTO00230 105 aa9.12□□□□□ -0.95
MSH5-209ENST00000450148 CLN5O75503 358 aa9.12□□□□□ -0.95
MSH5-209ENST00000450148 TNFSF8P32971 234 aa9.12□□□□□ -0.95
MSH5-209ENST00000450148 RPL5P46777 297 aaKnown RBP9.12□□□□□ -0.95
MSH5-209ENST00000450148 HOXA1P49639 335 aaPredicted RBP9.12□□□□□ -0.95
MSH5-209ENST00000450148 SPCS3P61009 180 aa9.12□□□□□ -0.95
MSH5-209ENST00000450148 EWSR1Q01844 656 aaKnown RBP eCLIP9.12□□□□□ -0.95
MSH5-209ENST00000450148 DHODHQ02127 395 aa9.12□□□□□ -0.95
MSH5-209ENST00000450148 APRG1Q8IVJ8 170 aa9.12□□□□□ -0.95
MSH5-209ENST00000450148 KIR2DL5AQ8N109 375 aa9.12□□□□□ -0.95
MSH5-209ENST00000450148 OR4X1Q8NH49 305 aa9.12□□□□□ -0.95
MSH5-209ENST00000450148 KIR2DL5BQ8NHK3 375 aa9.12□□□□□ -0.95
MSH5-209ENST00000450148 TMEM170AQ8WVE7 144 aa9.12□□□□□ -0.95
MSH5-209ENST00000450148 GALNT14Q96FL9 552 aa9.12□□□□□ -0.95
MSH5-209ENST00000450148 PRRT1Q99946 306 aa9.12□□□□□ -0.95
MSH5-209ENST00000450148 PDCD10Q9BUL8 212 aa9.12□□□□□ -0.95
MSH5-209ENST00000450148 C6orf62Q9GZU0 229 aaPredicted RBP9.12□□□□□ -0.95
MSH5-209ENST00000450148 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.12□□□□□ -0.95
MSH5-209ENST00000450148 UBE2CO00762 179 aa9.11□□□□□ -0.95
MSH5-209ENST00000450148 SPRY2O43597 315 aa9.11□□□□□ -0.95
MSH5-209ENST00000450148 IGKV1-17P01599 117 aa9.11□□□□□ -0.95
MSH5-209ENST00000450148 RPL35AP18077 110 aaKnown RBP9.11□□□□□ -0.95
MSH5-209ENST00000450148 SUB1P53999 127 aaKnown RBP eCLIP9.11□□□□□ -0.95
MSH5-209ENST00000450148 APOC4P55056 127 aa9.11□□□□□ -0.95
MSH5-209ENST00000450148 TMEM187Q14656 261 aa9.11□□□□□ -0.95
MSH5-209ENST00000450148 DEFB135Q30KP9 77 aa9.11□□□□□ -0.95
MSH5-209ENST00000450148 TMEM268Q5VZI3 342 aa9.11□□□□□ -0.95
MSH5-209ENST00000450148 TCF24Q7RTU0 167 aa9.11□□□□□ -0.95
MSH5-209ENST00000450148 RNF183Q96D59 192 aa9.11□□□□□ -0.95
MSH5-209ENST00000450148 GINS3Q9BRX5 216 aa9.11□□□□□ -0.95
MSH5-209ENST00000450148 MAP6D1Q9H9H5 199 aa9.11□□□□□ -0.95
MSH5-209ENST00000450148 CACNG5Q9UF02 275 aa9.11□□□□□ -0.95
MSH5-209ENST00000450148 IGKV3-7A0A075B6H7 116 aa9.1□□□□□ -0.95
MSH5-209ENST00000450148 A0A0J9YWU9 116 aa9.1□□□□□ -0.95
MSH5-209ENST00000450148 DFFBO76075 338 aa9.1□□□□□ -0.95
MSH5-209ENST00000450148 BMI1P35226 326 aa9.1□□□□□ -0.95
MSH5-209ENST00000450148 OPRK1P41145 380 aa9.1□□□□□ -0.95
MSH5-209ENST00000450148 TFPI2P48307 235 aa9.1□□□□□ -0.95
MSH5-209ENST00000450148 SUPT4H1P63272 117 aaKnown RBP9.1□□□□□ -0.95
MSH5-209ENST00000450148 TNFRSF9Q07011 255 aa9.1□□□□□ -0.95
MSH5-209ENST00000450148 C2orf83Q53S99 150 aa9.1□□□□□ -0.95
MSH5-209ENST00000450148 GBGT1Q8N5D6 347 aa9.1□□□□□ -0.95
MSH5-209ENST00000450148 RNASE11Q8TAA1 199 aaKnown RBP9.1□□□□□ -0.95
MSH5-209ENST00000450148 ENY2Q9NPA8 101 aa9.1□□□□□ -0.95
MSH5-209ENST00000450148 PRR13Q9NZ81 148 aa9.1□□□□□ -0.95
MSH5-209ENST00000450148 RSL24D1Q9UHA3 163 aaKnown RBP9.1□□□□□ -0.95
MSH5-209ENST00000450148 IGHV3-66A0A0C4DH42 116 aa9.09□□□□□ -0.95
MSH5-209ENST00000450148 CRYBB3P26998 211 aa9.09□□□□□ -0.95
MSH5-209ENST00000450148 HTR2BP41595 481 aa9.09□□□□□ -0.95
MSH5-209ENST00000450148 LYG2Q86SG7 212 aa9.09□□□□□ -0.95
MSH5-209ENST00000450148 FAM24BQ8N5W8 94 aa9.09□□□□□ -0.95
MSH5-209ENST00000450148 STPG3Q8N7X2 389 aa9.09□□□□□ -0.95
MSH5-209ENST00000450148 MCFD2Q8NI22 146 aa9.09□□□□□ -0.95
MSH5-209ENST00000450148 IL22RA2Q969J5 263 aa9.09□□□□□ -0.95
MSH5-209ENST00000450148 TRIM63Q969Q1 353 aa9.09□□□□□ -0.95
MSH5-209ENST00000450148 MS4A6AQ9H2W1 248 aa9.09□□□□□ -0.95
MSH5-209ENST00000450148 U3KQE9 123 aa9.09□□□□□ -0.95
MSH5-209ENST00000450148 HYDINQ4G0P3 5121 aa9.08□□□□□ -0.96
MSH5-209ENST00000450148 TRAV2A0A0B4J234 112 aa9.08□□□□□ -0.96
MSH5-209ENST00000450148 FABP12A6NFH5 140 aa9.08□□□□□ -0.96
MSH5-209ENST00000450148 NXPH3O95157 252 aa9.08□□□□□ -0.96
MSH5-209ENST00000450148 CD5P06127 495 aa9.08□□□□□ -0.96
MSH5-209ENST00000450148 IGLC1P0CG04 106 aa9.08□□□□□ -0.96
MSH5-209ENST00000450148 CMC4P56277 68 aaPredicted RBP9.08□□□□□ -0.96
MSH5-209ENST00000450148 KLF9Q13886 244 aaPredicted RBP9.08□□□□□ -0.96
MSH5-209ENST00000450148 TIGITQ495A1 244 aa9.08□□□□□ -0.96
MSH5-209ENST00000450148 NMSQ5H8A3 153 aa9.08□□□□□ -0.96
MSH5-209ENST00000450148 PRSS54Q6PEW0 395 aa9.08□□□□□ -0.96
MSH5-209ENST00000450148 SLC24A4Q8NFF2 622 aa9.08□□□□□ -0.96
MSH5-209ENST00000450148 HEYLQ9NQ87 328 aaPredicted RBP9.08□□□□□ -0.96
MSH5-209ENST00000450148 SCP2D1Q9UJQ7 156 aa9.08□□□□□ -0.96
MSH5-209ENST00000450148 V9GYH0 126 aa9.08□□□□□ -0.96
MSH5-209ENST00000450148 A0A0B4J2A0 478 aa9.07□□□□□ -0.96
MSH5-209ENST00000450148 SULT1A3P0DMM9 295 aa9.07□□□□□ -0.96
MSH5-209ENST00000450148 SULT1A4P0DMN0 295 aa9.07□□□□□ -0.96
MSH5-209ENST00000450148 ATF4P18848 351 aaPredicted RBP9.07□□□□□ -0.96
MSH5-209ENST00000450148 NPPCP23582 126 aa9.07□□□□□ -0.96
MSH5-209ENST00000450148 ZNF79Q15937 498 aa9.07□□□□□ -0.96
MSH5-209ENST00000450148 LYZL2Q7Z4W2 148 aa9.07□□□□□ -0.96
MSH5-209ENST00000450148 RNASEH2CQ8TDP1 164 aaKnown RBP9.07□□□□□ -0.96
MSH5-209ENST00000450148 CSTL1Q9H114 145 aa9.07□□□□□ -0.96
MSH5-209ENST00000450148 SHPKQ9UHJ6 478 aa9.07□□□□□ -0.96
MSH5-209ENST00000450148 KCNIP3Q9Y2W7 256 aa9.07□□□□□ -0.96
MSH5-209ENST00000450148 ALMS1Q8TCU4 4167 aa9.06□□□□□ -0.96
MSH5-209ENST00000450148 TRAV30A0A087WSZ9 112 aa9.06□□□□□ -0.96
MSH5-209ENST00000450148 RPS10-NUDT3A0A1W2PQS6 291 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms