RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 C19orf24Q9BVV8 132 aa12.88□□□□□ -0.35
AP000253.1-201ENST00000449339 VPS13CQ709C8 3753 aa12.88□□□□□ -0.35
AP000253.1-201ENST00000449339 FAM208BQ5VWN6 2430 aa12.88□□□□□ -0.35
AP000253.1-201ENST00000449339 C5orf52A6NGY3 159 aa12.88□□□□□ -0.35
AP000253.1-201ENST00000449339 IGHV3-48P01763 117 aa12.88□□□□□ -0.35
AP000253.1-201ENST00000449339 HTR1DP28221 377 aa12.88□□□□□ -0.35
AP000253.1-201ENST00000449339 RPL35P42766 123 aaKnown RBP12.88□□□□□ -0.35
AP000253.1-201ENST00000449339 COMPP49747 757 aaPredicted RBP12.88□□□□□ -0.35
AP000253.1-201ENST00000449339 TPTE2P1Q5T6R2 138 aa12.88□□□□□ -0.35
AP000253.1-201ENST00000449339 C16orf82Q7Z2V1 217 aa12.88□□□□□ -0.35
AP000253.1-201ENST00000449339 CCL19Q99731 98 aa12.88□□□□□ -0.35
AP000253.1-201ENST00000449339 DOK5Q9P104 306 aa12.88□□□□□ -0.35
AP000253.1-201ENST00000449339 SVEP1Q4LDE5 3571 aa12.87□□□□□ -0.35
AP000253.1-201ENST00000449339 TIMM23O14925 209 aa12.87□□□□□ -0.35
AP000253.1-201ENST00000449339 LMO4P61968 165 aa12.87□□□□□ -0.35
AP000253.1-201ENST00000449339 SSBP2P81877 361 aaPredicted RBP12.87□□□□□ -0.35
AP000253.1-201ENST00000449339 NPIPB3Q92617 1050 aa12.87□□□□□ -0.35
AP000253.1-201ENST00000449339 LRRK2Q5S007 2527 aa12.87□□□□□ -0.35
AP000253.1-201ENST00000449339 UBR5O95071 2799 aaPredicted RBP12.87□□□□□ -0.35
AP000253.1-201ENST00000449339 OR5G3P0C626 314 aa12.86□□□□□ -0.35
AP000253.1-201ENST00000449339 APELAP0DMC3 54 aa12.86□□□□□ -0.35
AP000253.1-201ENST00000449339 AREGP15514 252 aa12.86□□□□□ -0.35
AP000253.1-201ENST00000449339 SRSF1Q07955 248 aaKnown RBP eCLIP12.86□□□□□ -0.35
AP000253.1-201ENST00000449339 TMEM37Q8WXS4 190 aa12.86□□□□□ -0.35
AP000253.1-201ENST00000449339 FAM210BQ96KR6 192 aa12.86□□□□□ -0.35
AP000253.1-201ENST00000449339 RNF5Q99942 180 aa12.86□□□□□ -0.35
AP000253.1-201ENST00000449339 FBXL15Q9H469 300 aa12.86□□□□□ -0.35
AP000253.1-201ENST00000449339 TECRQ9NZ01 308 aaKnown RBP12.86□□□□□ -0.35
AP000253.1-201ENST00000449339 DPM3Q9P2X0 92 aa12.86□□□□□ -0.35
AP000253.1-201ENST00000449339 SCO2A0A1W2PP80 73 aa12.86□□□□□ -0.35
AP000253.1-201ENST00000449339 ODF3BA8MYP8 253 aa12.86□□□□□ -0.35
AP000253.1-201ENST00000449339 CD24P25063 80 aa12.86□□□□□ -0.35
AP000253.1-201ENST00000449339 PAX2Q02962 417 aa12.86□□□□□ -0.35
AP000253.1-201ENST00000449339 ZNF114Q8NC26 417 aa12.86□□□□□ -0.35
AP000253.1-201ENST00000449339 H7BYZ3 331 aa12.85□□□□□ -0.35
AP000253.1-201ENST00000449339 FBLN7Q53RD9 439 aa12.85□□□□□ -0.35
AP000253.1-201ENST00000449339 ZNF600Q6ZNG1 722 aa12.85□□□□□ -0.35
AP000253.1-201ENST00000449339 LINC01551Q86U37 167 aa12.85□□□□□ -0.35
AP000253.1-201ENST00000449339 LPAR2Q9HBW0 351 aa12.85□□□□□ -0.35
AP000253.1-201ENST00000449339 TMEM167BQ9NRX6 74 aa12.85□□□□□ -0.35
AP000253.1-201ENST00000449339 MRPL36Q9P0J6 103 aaKnown RBP12.85□□□□□ -0.35
AP000253.1-201ENST00000449339 ABCA2Q9BZC7 2435 aa12.85□□□□□ -0.35
AP000253.1-201ENST00000449339 TRBV24-1A0A075B6N3 115 aa12.85□□□□□ -0.35
AP000253.1-201ENST00000449339 PSMB11A5LHX3 300 aa12.85□□□□□ -0.35
AP000253.1-201ENST00000449339 OR7C2O60412 319 aa12.85□□□□□ -0.35
AP000253.1-201ENST00000449339 HOXB4P17483 251 aaPredicted RBP12.85□□□□□ -0.35
AP000253.1-201ENST00000449339 TAS2R45P59539 299 aa12.85□□□□□ -0.35
AP000253.1-201ENST00000449339 ZNF90Q03938 601 aa12.85□□□□□ -0.35
AP000253.1-201ENST00000449339 PVRIGQ6DKI7 326 aa12.85□□□□□ -0.35
AP000253.1-201ENST00000449339 PQLC2Q6ZP29 291 aa12.85□□□□□ -0.35
AP000253.1-201ENST00000449339 OR5T1Q8NG75 326 aa12.85□□□□□ -0.35
AP000253.1-201ENST00000449339 NRGNQ92686 78 aa12.85□□□□□ -0.35
AP000253.1-201ENST00000449339 MISP3Q96FF7 219 aa12.85□□□□□ -0.35
AP000253.1-201ENST00000449339 IGKV1D-37A0A075B6S9 117 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 TCRBV4S1A1TA0A5B7 111 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 CEACAM3P40198 252 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 MFAP2P55001 183 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 PLGLAQ15195 96 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 ETFRF1Q6IPR1 90 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 C19orf35Q6ZS72 473 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 DYNAPQ8N1N2 210 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 THAP8Q8NA92 274 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 ANAPC16Q96DE5 110 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 ZNF503Q96F45 646 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 SPOCK3Q9BQ16 436 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 SLC25A33Q9BSK2 321 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 SIRPDQ9H106 197 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 MAP1AP78559 2803 aaPredicted RBP12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 TRBV20OR9-2A0A075B6H5 130 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 IGHV2-70DA0A0C4DH43 119 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 TEX22C9J3V5 150 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 FCN1O00602 326 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 UBE2CO00762 179 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 PDLIM4P50479 330 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 KIR3DL3Q8N743 410 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 NECAP1Q8NC96 275 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 OR1P1Q8NH06 330 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 MRPL32Q9BYC8 188 aaKnown RBP12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 DNAJC4Q9NNZ3 241 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 AURKAIP1Q9NWT8 199 aaPredicted RBP12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 ARL2-SNX15V9GYD0 113 aa12.84□□□□□ -0.35
AP000253.1-201ENST00000449339 A1L4Q6 167 aa12.83□□□□□ -0.36
AP000253.1-201ENST00000449339 PFN1P07737 140 aaKnown RBP12.83□□□□□ -0.36
AP000253.1-201ENST00000449339 C8orf88P0DMB2 117 aa12.83□□□□□ -0.36
AP000253.1-201ENST00000449339 GALR1P47211 349 aa12.83□□□□□ -0.36
AP000253.1-201ENST00000449339 FABP9Q0Z7S8 132 aa12.83□□□□□ -0.36
AP000253.1-201ENST00000449339 MMDQ15546 238 aa12.83□□□□□ -0.36
AP000253.1-201ENST00000449339 SSX2Q16385 188 aa12.83□□□□□ -0.36
AP000253.1-201ENST00000449339 FAM209BQ5JX69 171 aa12.83□□□□□ -0.36
AP000253.1-201ENST00000449339 C1orf122Q6ZSJ8 110 aa12.83□□□□□ -0.36
AP000253.1-201ENST00000449339 SRSF12Q8WXF0 261 aaKnown RBP12.83□□□□□ -0.36
AP000253.1-201ENST00000449339 CFHR4Q92496 578 aa12.83□□□□□ -0.36
AP000253.1-201ENST00000449339 OR5B12Q96R08 314 aa12.83□□□□□ -0.36
AP000253.1-201ENST00000449339 PGPEP1LA6NFU8 196 aa12.82□□□□□ -0.36
AP000253.1-201ENST00000449339 TRGC2P03986 189 aa12.82□□□□□ -0.36
AP000253.1-201ENST00000449339 CRYGCP07315 174 aa12.82□□□□□ -0.36
AP000253.1-201ENST00000449339 OR10J4P0C629 311 aa12.82□□□□□ -0.36
AP000253.1-201ENST00000449339 SELENOTP62341 195 aa12.82□□□□□ -0.36
AP000253.1-201ENST00000449339 RUSC1-AS1Q66K80 236 aa12.82□□□□□ -0.36
AP000253.1-201ENST00000449339 UHRF2Q96PU4 802 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms