RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 ATP5IP56385 69 aaPredicted RBP10.7□□□□□ -0.7
GTF3C3-206ENST00000448539 KRTAP10-11P60412 298 aa10.7□□□□□ -0.7
GTF3C3-206ENST00000448539 RELQ04864 619 aaPredicted RBP10.7□□□□□ -0.7
GTF3C3-206ENST00000448539 IAH1Q2TAA2 248 aaPredicted RBP10.7□□□□□ -0.7
GTF3C3-206ENST00000448539 PVRIGQ6DKI7 326 aa10.7□□□□□ -0.7
GTF3C3-206ENST00000448539 ETFRF1Q6IPR1 90 aa10.7□□□□□ -0.7
GTF3C3-206ENST00000448539 C12orf45Q8N5I9 185 aaPredicted RBP10.7□□□□□ -0.7
GTF3C3-206ENST00000448539 AURKAIP1Q9NWT8 199 aaPredicted RBP10.7□□□□□ -0.7
GTF3C3-206ENST00000448539 PAIP2BQ9ULR5 123 aaKnown RBP10.7□□□□□ -0.7
GTF3C3-206ENST00000448539 FAM25EA8MYX2 175 aa10.69□□□□□ -0.7
GTF3C3-206ENST00000448539 SYNGR2O43760 224 aa10.69□□□□□ -0.7
GTF3C3-206ENST00000448539 IFNA4P05014 189 aa10.69□□□□□ -0.7
GTF3C3-206ENST00000448539 IL5P05113 134 aa10.69□□□□□ -0.7
GTF3C3-206ENST00000448539 NKX2-1P43699 371 aaPredicted RBP10.69□□□□□ -0.7
GTF3C3-206ENST00000448539 DCTN2Q13561 401 aaKnown RBP10.69□□□□□ -0.7
GTF3C3-206ENST00000448539 DYNLRB2Q8TF09 96 aa10.69□□□□□ -0.7
GTF3C3-206ENST00000448539 CHRDL1Q9BU40 450 aa10.69□□□□□ -0.7
GTF3C3-206ENST00000448539 MAGT1Q9H0U3 335 aa10.69□□□□□ -0.7
GTF3C3-206ENST00000448539 GSKIPQ9P0R6 139 aa10.69□□□□□ -0.7
GTF3C3-206ENST00000448539 UFC1Q9Y3C8 167 aa10.69□□□□□ -0.7
GTF3C3-206ENST00000448539 C5orf51A6NDU8 294 aa10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 C2orf70A6NJV1 201 aa10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 MPTX1A8MV57 137 aa10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 F8W735 103 aaPredicted RBP10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 INMT-MINDY4F8WBC2 141 aa10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 NDUFA4O00483 81 aa10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 PRAF2O60831 178 aa10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 YIF1AO95070 293 aa10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 SCGB1D2O95969 90 aa10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 CSN3P07498 182 aa10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 CTSGP08311 255 aa10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 SLC25A4P12235 298 aa10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 RAB11AP62491 216 aa10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 DMRTA1Q5VZB9 504 aa10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 C11orf87Q6NUJ2 197 aa10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 IL34Q6ZMJ4 242 aa10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 C20orf24Q9BUV8 137 aa10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 ZNF436Q9C0F3 470 aaPredicted RBP10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 FNDC4Q9H6D8 234 aaPredicted RBP10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 SIGLEC8Q9NYZ4 499 aa10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 ZNF256Q9Y2P7 627 aaPredicted RBP10.68□□□□□ -0.7
GTF3C3-206ENST00000448539 CCSO14618 274 aa10.67□□□□□ -0.7
GTF3C3-206ENST00000448539 CLN5O75503 358 aa10.67□□□□□ -0.7
GTF3C3-206ENST00000448539 FOLR2P14207 255 aa10.67□□□□□ -0.7
GTF3C3-206ENST00000448539 ADMP35318 185 aa10.67□□□□□ -0.7
GTF3C3-206ENST00000448539 ID3Q02535 119 aa10.67□□□□□ -0.7
GTF3C3-206ENST00000448539 MLANAQ16655 118 aa10.67□□□□□ -0.7
GTF3C3-206ENST00000448539 UNQ9165/PRO28630Q6UXU0 137 aa10.67□□□□□ -0.7
GTF3C3-206ENST00000448539 HAPLN4Q86UW8 402 aa10.67□□□□□ -0.7
GTF3C3-206ENST00000448539 ZBTB8BQ8NAP8 495 aaPredicted RBP10.67□□□□□ -0.7
GTF3C3-206ENST00000448539 OR4D5Q8NGN0 318 aa10.67□□□□□ -0.7
GTF3C3-206ENST00000448539 OR4X1Q8NH49 305 aa10.67□□□□□ -0.7
GTF3C3-206ENST00000448539 MRAPQ8TCY5 172 aa10.67□□□□□ -0.7
GTF3C3-206ENST00000448539 OR10C1Q96KK4 312 aa10.67□□□□□ -0.7
GTF3C3-206ENST00000448539 TRAV30A0A087WSZ9 112 aa10.66□□□□□ -0.7
GTF3C3-206ENST00000448539 A8MWP6 167 aa10.66□□□□□ -0.7
GTF3C3-206ENST00000448539 TMEM50AO95807 157 aa10.66□□□□□ -0.7
GTF3C3-206ENST00000448539 IGLV1-51P01701 117 aa10.66□□□□□ -0.7
GTF3C3-206ENST00000448539 SPNP16150 400 aa10.66□□□□□ -0.7
GTF3C3-206ENST00000448539 ELLP55199 621 aaPredicted RBP10.66□□□□□ -0.7
GTF3C3-206ENST00000448539 POLR2GP62487 172 aaKnown RBP eCLIP10.66□□□□□ -0.7
GTF3C3-206ENST00000448539 TM4SF20Q53R12 229 aa10.66□□□□□ -0.7
GTF3C3-206ENST00000448539 SPANXN5Q5MJ07 72 aa10.66□□□□□ -0.7
GTF3C3-206ENST00000448539 LCN12Q6JVE5 192 aa10.66□□□□□ -0.7
GTF3C3-206ENST00000448539 GSG1LQ6UXU4 331 aa10.66□□□□□ -0.7
GTF3C3-206ENST00000448539 TMEM170AQ8WVE7 144 aa10.66□□□□□ -0.7
GTF3C3-206ENST00000448539 TMEM190Q8WZ59 177 aa10.66□□□□□ -0.7
GTF3C3-206ENST00000448539 MARC2Q969Z3 335 aa10.66□□□□□ -0.7
GTF3C3-206ENST00000448539 PRR25Q96S07 402 aa10.66□□□□□ -0.7
GTF3C3-206ENST00000448539 MARVELD1Q9BSK0 173 aa10.66□□□□□ -0.7
GTF3C3-206ENST00000448539 TECRQ9NZ01 308 aaKnown RBP10.66□□□□□ -0.7
GTF3C3-206ENST00000448539 SNRPGP15A8MWD9 76 aa10.65□□□□□ -0.7
GTF3C3-206ENST00000448539 SSSCA1O60232 199 aa10.65□□□□□ -0.7
GTF3C3-206ENST00000448539 CBLN1P23435 193 aa10.65□□□□□ -0.7
GTF3C3-206ENST00000448539 RND2P52198 227 aa10.65□□□□□ -0.7
GTF3C3-206ENST00000448539 CD69Q07108 199 aa10.65□□□□□ -0.7
GTF3C3-206ENST00000448539 DEFB121Q5J5C9 76 aa10.65□□□□□ -0.7
GTF3C3-206ENST00000448539 PRSS54Q6PEW0 395 aa10.65□□□□□ -0.7
GTF3C3-206ENST00000448539 SLC16A13Q7RTY0 426 aa10.65□□□□□ -0.7
GTF3C3-206ENST00000448539 OR2K2Q8NGT1 345 aa10.65□□□□□ -0.7
GTF3C3-206ENST00000448539 SLC35E1Q96K37 410 aa10.65□□□□□ -0.7
GTF3C3-206ENST00000448539 DAZ1Q9NQZ3 744 aaKnown RBP10.65□□□□□ -0.7
GTF3C3-206ENST00000448539 PSENENQ9NZ42 101 aa10.65□□□□□ -0.7
GTF3C3-206ENST00000448539 MRPL27Q9P0M9 148 aaKnown RBP10.65□□□□□ -0.7
GTF3C3-206ENST00000448539 STRAPQ9Y3F4 350 aaKnown RBP10.65□□□□□ -0.7
GTF3C3-206ENST00000448539 IGHV3OR16-8A0A075B7F1 116 aa10.64□□□□□ -0.71
GTF3C3-206ENST00000448539 WI2-2373I1.2A0A1W2PRP0 233 aa10.64□□□□□ -0.71
GTF3C3-206ENST00000448539 TMEM213A2RRL7 107 aa10.64□□□□□ -0.71
GTF3C3-206ENST00000448539 C15orf62A8K5M9 175 aa10.64□□□□□ -0.71
GTF3C3-206ENST00000448539 H3BP45 60 aa10.64□□□□□ -0.71
GTF3C3-206ENST00000448539 PTTG1O95997 202 aa10.64□□□□□ -0.71
GTF3C3-206ENST00000448539 GP9P14770 177 aa10.64□□□□□ -0.71
GTF3C3-206ENST00000448539 GPX4P36969 197 aaPredicted RBP10.64□□□□□ -0.71
GTF3C3-206ENST00000448539 ZNF600Q6ZNG1 722 aa10.64□□□□□ -0.71
GTF3C3-206ENST00000448539 TMEM116Q8NCL8 245 aa10.64□□□□□ -0.71
GTF3C3-206ENST00000448539 OR1S2Q8NGQ3 325 aa10.64□□□□□ -0.71
GTF3C3-206ENST00000448539 CACNG8Q8WXS5 425 aa10.64□□□□□ -0.71
GTF3C3-206ENST00000448539 NPIPB3Q92617 1050 aa10.64□□□□□ -0.71
GTF3C3-206ENST00000448539 ACY3Q96HD9 319 aa10.64□□□□□ -0.71
GTF3C3-206ENST00000448539 C2orf50Q96LR7 162 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms