RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 SPCS3P61009 180 aa13.15□□□□□ -0.3
DDX56-207ENST00000448192 TMEM268Q5VZI3 342 aa13.15□□□□□ -0.3
DDX56-207ENST00000448192 TOMM20LQ6UXN7 152 aa13.15□□□□□ -0.3
DDX56-207ENST00000448192 MCFD2Q8NI22 146 aa13.15□□□□□ -0.3
DDX56-207ENST00000448192 IL17DQ8TAD2 202 aa13.15□□□□□ -0.3
DDX56-207ENST00000448192 OVOL2Q9BRP0 275 aa13.15□□□□□ -0.3
DDX56-207ENST00000448192 MCUBQ9NWR8 336 aa13.15□□□□□ -0.3
DDX56-207ENST00000448192 TMEM50AO95807 157 aa13.14□□□□□ -0.31
DDX56-207ENST00000448192 OPRK1P41145 380 aa13.14□□□□□ -0.31
DDX56-207ENST00000448192 PVRIGQ6DKI7 326 aa13.14□□□□□ -0.31
DDX56-207ENST00000448192 ZNF600Q6ZNG1 722 aa13.14□□□□□ -0.31
DDX56-207ENST00000448192 HEYLQ9NQ87 328 aaPredicted RBP13.14□□□□□ -0.31
DDX56-207ENST00000448192 CACNG5Q9UF02 275 aa13.14□□□□□ -0.31
DDX56-207ENST00000448192 SCP2D1Q9UJQ7 156 aa13.14□□□□□ -0.31
DDX56-207ENST00000448192 PUS1Q9Y606 427 aaKnown RBP eCLIP13.14□□□□□ -0.31
DDX56-207ENST00000448192 LCE6AA0A183 80 aa13.13□□□□□ -0.31
DDX56-207ENST00000448192 RPL35AP18077 110 aaKnown RBP13.13□□□□□ -0.31
DDX56-207ENST00000448192 MLANAQ16655 118 aa13.13□□□□□ -0.31
DDX56-207ENST00000448192 TCF24Q7RTU0 167 aa13.13□□□□□ -0.31
DDX56-207ENST00000448192 APRG1Q8IVJ8 170 aa13.13□□□□□ -0.31
DDX56-207ENST00000448192 GBGT1Q8N5D6 347 aa13.13□□□□□ -0.31
DDX56-207ENST00000448192 GPR146Q96CH1 333 aa13.13□□□□□ -0.31
DDX56-207ENST00000448192 FNDC4Q9H6D8 234 aaPredicted RBP13.13□□□□□ -0.31
DDX56-207ENST00000448192 MRPL36Q9P0J6 103 aaKnown RBP13.13□□□□□ -0.31
DDX56-207ENST00000448192 KCNIP3Q9Y2W7 256 aa13.13□□□□□ -0.31
DDX56-207ENST00000448192 DNAH1Q9P2D7 4330 aa13.12□□□□□ -0.31
DDX56-207ENST00000448192 IGHV3-66A0A0C4DH42 116 aa13.12□□□□□ -0.31
DDX56-207ENST00000448192 A0A1B0GU03 582 aa13.12□□□□□ -0.31
DDX56-207ENST00000448192 CEBPZOSA8MTT3 80 aa13.12□□□□□ -0.31
DDX56-207ENST00000448192 APOHP02749 345 aaPredicted RBP13.12□□□□□ -0.31
DDX56-207ENST00000448192 BMI1P35226 326 aa13.12□□□□□ -0.31
DDX56-207ENST00000448192 HTR2BP41595 481 aa13.12□□□□□ -0.31
DDX56-207ENST00000448192 DEFB135Q30KP9 77 aa13.12□□□□□ -0.31
DDX56-207ENST00000448192 BSXQ3C1V8 233 aa13.12□□□□□ -0.31
DDX56-207ENST00000448192 AARDQ4LEZ3 155 aa13.12□□□□□ -0.31
DDX56-207ENST00000448192 OR52E5Q8NH55 327 aa13.12□□□□□ -0.31
DDX56-207ENST00000448192 ST8SIA2Q92186 375 aa13.12□□□□□ -0.31
DDX56-207ENST00000448192 SCGB3A2Q96PL1 93 aa13.12□□□□□ -0.31
DDX56-207ENST00000448192 SOSTQ9BQB4 213 aa13.12□□□□□ -0.31
DDX56-207ENST00000448192 ZFAND3Q9H8U3 227 aa13.12□□□□□ -0.31
DDX56-207ENST00000448192 PRR13Q9NZ81 148 aa13.12□□□□□ -0.31
DDX56-207ENST00000448192 TMEM56-RWDD3S4R434 201 aa13.12□□□□□ -0.31
DDX56-207ENST00000448192 CCDC160A6NGH7 325 aa13.11□□□□□ -0.31
DDX56-207ENST00000448192 CLN5O75503 358 aa13.11□□□□□ -0.31
DDX56-207ENST00000448192 NXPH3O95157 252 aa13.11□□□□□ -0.31
DDX56-207ENST00000448192 AKR1C4P17516 323 aa13.11□□□□□ -0.31
DDX56-207ENST00000448192 PAFAH1B2P68402 229 aa13.11□□□□□ -0.31
DDX56-207ENST00000448192 ZNF124Q15973 351 aa13.11□□□□□ -0.31
DDX56-207ENST00000448192 FAM90A2PQ658T7 463 aa13.11□□□□□ -0.31
DDX56-207ENST00000448192 Q6ZWC4 215 aa13.11□□□□□ -0.31
DDX56-207ENST00000448192 WFDC3Q8IUB2 231 aa13.11□□□□□ -0.31
DDX56-207ENST00000448192 STPG3Q8N7X2 389 aa13.11□□□□□ -0.31
DDX56-207ENST00000448192 OR4X1Q8NH49 305 aa13.11□□□□□ -0.31
DDX56-207ENST00000448192 TMEM230Q96A57 120 aa13.11□□□□□ -0.31
DDX56-207ENST00000448192 GALNT14Q96FL9 552 aa13.11□□□□□ -0.31
DDX56-207ENST00000448192 UBE2CO00762 179 aa13.1□□□□□ -0.31
DDX56-207ENST00000448192 SPRY2O43597 315 aa13.1□□□□□ -0.31
DDX56-207ENST00000448192 SCGB2A1O75556 95 aa13.1□□□□□ -0.31
DDX56-207ENST00000448192 CMC4P56277 68 aaPredicted RBP13.1□□□□□ -0.31
DDX56-207ENST00000448192 RPL11P62913 178 aaKnown RBP13.1□□□□□ -0.31
DDX56-207ENST00000448192 TMEM187Q14656 261 aa13.1□□□□□ -0.31
DDX56-207ENST00000448192 KIR2DL5BA0A0G2JN68 375 aa13.09□□□□□ -0.31
DDX56-207ENST00000448192 KIR2DL5BA0A0G2JPC4 375 aa13.09□□□□□ -0.31
DDX56-207ENST00000448192 RPS10-NUDT3A0A1W2PQS6 291 aa13.09□□□□□ -0.31
DDX56-207ENST00000448192 DFFBO76075 338 aa13.09□□□□□ -0.31
DDX56-207ENST00000448192 CD5P06127 495 aa13.09□□□□□ -0.31
DDX56-207ENST00000448192 SULT1A3P0DMM9 295 aa13.09□□□□□ -0.31
DDX56-207ENST00000448192 SULT1A4P0DMN0 295 aa13.09□□□□□ -0.31
DDX56-207ENST00000448192 NPPCP23582 126 aa13.09□□□□□ -0.31
DDX56-207ENST00000448192 PYDC2Q56P42 97 aa13.09□□□□□ -0.31
DDX56-207ENST00000448192 KIR2DL5AQ8N109 375 aa13.09□□□□□ -0.31
DDX56-207ENST00000448192 LILRB2Q8N423 598 aa13.09□□□□□ -0.31
DDX56-207ENST00000448192 KIR2DL5BQ8NHK3 375 aa13.09□□□□□ -0.31
DDX56-207ENST00000448192 IL22RA2Q969J5 263 aa13.09□□□□□ -0.31
DDX56-207ENST00000448192 VSIRQ9H7M9 311 aa13.09□□□□□ -0.31
DDX56-207ENST00000448192 MAP6D1Q9H9H5 199 aa13.09□□□□□ -0.31
DDX56-207ENST00000448192 TP53TG1Q9Y2A0 90 aa13.09□□□□□ -0.31
DDX56-207ENST00000448192 PLECQ15149 4684 aaKnown RBP13.09□□□□□ -0.31
DDX56-207ENST00000448192 DNASE2O00115 360 aaPredicted RBP13.08□□□□□ -0.32
DDX56-207ENST00000448192 TIGITQ495A1 244 aa13.08□□□□□ -0.32
DDX56-207ENST00000448192 C2orf83Q53S99 150 aa13.08□□□□□ -0.32
DDX56-207ENST00000448192 SLC24A4Q8NFF2 622 aa13.08□□□□□ -0.32
DDX56-207ENST00000448192 METTL26Q96S19 204 aa13.08□□□□□ -0.32
DDX56-207ENST00000448192 MS4A6AQ9H2W1 248 aa13.08□□□□□ -0.32
DDX56-207ENST00000448192 TMEM231Q9H6L2 316 aa13.08□□□□□ -0.32
DDX56-207ENST00000448192 TRAV30A0A087WSZ9 112 aa13.07□□□□□ -0.32
DDX56-207ENST00000448192 A0A0J9YWU9 116 aa13.07□□□□□ -0.32
DDX56-207ENST00000448192 ANXA3P12429 323 aa13.07□□□□□ -0.32
DDX56-207ENST00000448192 FAUP35544 74 aaKnown RBP13.07□□□□□ -0.32
DDX56-207ENST00000448192 SUPT4H1P63272 117 aaKnown RBP13.07□□□□□ -0.32
DDX56-207ENST00000448192 LYZL2Q7Z4W2 148 aa13.07□□□□□ -0.32
DDX56-207ENST00000448192 RNASEH2CQ8TDP1 164 aaKnown RBP13.07□□□□□ -0.32
DDX56-207ENST00000448192 HYDINQ4G0P3 5121 aa13.06□□□□□ -0.32
DDX56-207ENST00000448192 A0A1W2PS18 150 aa13.06□□□□□ -0.32
DDX56-207ENST00000448192 IGKV1-17P01599 117 aa13.06□□□□□ -0.32
DDX56-207ENST00000448192 S100A5P33763 92 aa13.06□□□□□ -0.32
DDX56-207ENST00000448192 RND2P52198 227 aa13.06□□□□□ -0.32
DDX56-207ENST00000448192 KLF9Q13886 244 aaPredicted RBP13.06□□□□□ -0.32
DDX56-207ENST00000448192 PRSS54Q6PEW0 395 aa13.06□□□□□ -0.32
DDX56-207ENST00000448192 TMED4Q7Z7H5 227 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms