RNA–Protein interactions for RNA: ENST00000446930.1

RGPD6-204, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-204ENST00000446930 TRIM16LQ309B1 348 aa12.97□□□□□ -0.33
RGPD6-204ENST00000446930 SPINK9Q5DT21 86 aa12.97□□□□□ -0.33
RGPD6-204ENST00000446930 LILRB2Q8N423 598 aa12.97□□□□□ -0.33
RGPD6-204ENST00000446930 OR4X1Q8NH49 305 aa12.97□□□□□ -0.33
RGPD6-204ENST00000446930 OR52E5Q8NH55 327 aa12.97□□□□□ -0.33
RGPD6-204ENST00000446930 RRNAD1Q96FB5 475 aaKnown RBP12.97□□□□□ -0.33
RGPD6-204ENST00000446930 NAA50Q9GZZ1 169 aaKnown RBP12.97□□□□□ -0.33
RGPD6-204ENST00000446930 TMEM222Q9H0R3 208 aa12.97□□□□□ -0.33
RGPD6-204ENST00000446930 IGHV3OR16-13A0A075B7E8 117 aa12.96□□□□□ -0.33
RGPD6-204ENST00000446930 IGHV3-74A0A0B4J1X5 117 aa12.96□□□□□ -0.33
RGPD6-204ENST00000446930 SCGB2A1O75556 95 aa12.96□□□□□ -0.33
RGPD6-204ENST00000446930 RAB3DO95716 219 aa12.96□□□□□ -0.33
RGPD6-204ENST00000446930 LY6G6CO95867 125 aa12.96□□□□□ -0.33
RGPD6-204ENST00000446930 APOHP02749 345 aaPredicted RBP12.96□□□□□ -0.33
RGPD6-204ENST00000446930 CRYBB3P26998 211 aa12.96□□□□□ -0.33
RGPD6-204ENST00000446930 ETV6P41212 452 aa12.96□□□□□ -0.33
RGPD6-204ENST00000446930 HOXA1P49639 335 aaPredicted RBP12.96□□□□□ -0.33
RGPD6-204ENST00000446930 PPP5CP53041 499 aa12.96□□□□□ -0.33
RGPD6-204ENST00000446930 GPR107Q5VW38 600 aa12.96□□□□□ -0.33
RGPD6-204ENST00000446930 STEAP1BQ6NZ63 245 aa12.96□□□□□ -0.33
RGPD6-204ENST00000446930 GBGT1Q8N5D6 347 aa12.96□□□□□ -0.33
RGPD6-204ENST00000446930 RARRES2Q99969 163 aa12.96□□□□□ -0.33
RGPD6-204ENST00000446930 FNDC4Q9H6D8 234 aaPredicted RBP12.96□□□□□ -0.33
RGPD6-204ENST00000446930 NDUFA13Q9P0J0 144 aa12.96□□□□□ -0.33
RGPD6-204ENST00000446930 IGKV3-7A0A075B6H7 116 aa12.95□□□□□ -0.34
RGPD6-204ENST00000446930 A0A0G2JRQ6 117 aa12.95□□□□□ -0.34
RGPD6-204ENST00000446930 A0A1W2PS18 150 aa12.95□□□□□ -0.34
RGPD6-204ENST00000446930 NPPCP23582 126 aa12.95□□□□□ -0.34
RGPD6-204ENST00000446930 SPCS3P61009 180 aa12.95□□□□□ -0.34
RGPD6-204ENST00000446930 MEF2DQ14814 521 aa12.95□□□□□ -0.34
RGPD6-204ENST00000446930 SP6Q3SY56 376 aa12.95□□□□□ -0.34
RGPD6-204ENST00000446930 RNASE12Q5GAN4 147 aaKnown RBP12.95□□□□□ -0.34
RGPD6-204ENST00000446930 MARCH1Q8TCQ1 289 aa12.95□□□□□ -0.34
RGPD6-204ENST00000446930 PHLDA1Q8WV24 401 aaPredicted RBP12.95□□□□□ -0.34
RGPD6-204ENST00000446930 GRAMD2BQ96HH9 432 aa12.95□□□□□ -0.34
RGPD6-204ENST00000446930 MFFQ9GZY8 342 aa12.95□□□□□ -0.34
RGPD6-204ENST00000446930 ENY2Q9NPA8 101 aa12.95□□□□□ -0.34
RGPD6-204ENST00000446930 TRAV30A0A087WSZ9 112 aa12.94□□□□□ -0.34
RGPD6-204ENST00000446930 DNASE2O00115 360 aaPredicted RBP12.94□□□□□ -0.34
RGPD6-204ENST00000446930 IGKV1-17P01599 117 aa12.94□□□□□ -0.34
RGPD6-204ENST00000446930 OPRK1P41145 380 aa12.94□□□□□ -0.34
RGPD6-204ENST00000446930 Q6ZRM9 215 aa12.94□□□□□ -0.34
RGPD6-204ENST00000446930 GLYATL2Q8WU03 294 aa12.94□□□□□ -0.34
RGPD6-204ENST00000446930 SMIM4Q8WVI0 70 aa12.94□□□□□ -0.34
RGPD6-204ENST00000446930 RBPMSQ93062 196 aaKnown RBP12.94□□□□□ -0.34
RGPD6-204ENST00000446930 METTL26Q96S19 204 aa12.94□□□□□ -0.34
RGPD6-204ENST00000446930 MIXL1Q9H2W2 232 aa12.94□□□□□ -0.34
RGPD6-204ENST00000446930 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.94□□□□□ -0.34
RGPD6-204ENST00000446930 MRPL36Q9P0J6 103 aaKnown RBP12.94□□□□□ -0.34
RGPD6-204ENST00000446930 CACFD1Q9UGQ2 172 aa12.94□□□□□ -0.34
RGPD6-204ENST00000446930 CA1P00915 261 aaPredicted RBP12.93□□□□□ -0.34
RGPD6-204ENST00000446930 HTR2BP41595 481 aa12.93□□□□□ -0.34
RGPD6-204ENST00000446930 SCGB2B2Q4G0G5 96 aa12.93□□□□□ -0.34
RGPD6-204ENST00000446930 TMEM41BQ5BJD5 291 aa12.93□□□□□ -0.34
RGPD6-204ENST00000446930 OR11H2Q8NH07 326 aa12.93□□□□□ -0.34
RGPD6-204ENST00000446930 RTBDNQ9BSG5 229 aaPredicted RBP12.93□□□□□ -0.34
RGPD6-204ENST00000446930 RABL2AQ9UBK7 228 aaPredicted RBP12.93□□□□□ -0.34
RGPD6-204ENST00000446930 RABL2BQ9UNT1 228 aa12.93□□□□□ -0.34
RGPD6-204ENST00000446930 RPS10-NUDT3A0A1W2PQS6 291 aa12.92□□□□□ -0.34
RGPD6-204ENST00000446930 K7EQG2 157 aa12.92□□□□□ -0.34
RGPD6-204ENST00000446930 OR5AC1P0C628 307 aa12.92□□□□□ -0.34
RGPD6-204ENST00000446930 ALDH3B2P48448 385 aa12.92□□□□□ -0.34
RGPD6-204ENST00000446930 DEFB131AP59861 70 aa12.92□□□□□ -0.34
RGPD6-204ENST00000446930 DHODHQ02127 395 aa12.92□□□□□ -0.34
RGPD6-204ENST00000446930 C2orf83Q53S99 150 aa12.92□□□□□ -0.34
RGPD6-204ENST00000446930 LGALS9CQ6DKI2 356 aa12.92□□□□□ -0.34
RGPD6-204ENST00000446930 RNASE11Q8TAA1 199 aaKnown RBP12.92□□□□□ -0.34
RGPD6-204ENST00000446930 RNASEH2CQ8TDP1 164 aaKnown RBP12.92□□□□□ -0.34
RGPD6-204ENST00000446930 NAA60Q9H7X0 242 aa12.92□□□□□ -0.34
RGPD6-204ENST00000446930 C14orf166Q9Y224 244 aaKnown RBP12.92□□□□□ -0.34
RGPD6-204ENST00000446930 U3KQE9 123 aa12.92□□□□□ -0.34
RGPD6-204ENST00000446930 TEX13DA0A0J9YY54 714 aaPredicted RBP12.91□□□□□ -0.34
RGPD6-204ENST00000446930 CTDSPLO15194 276 aa12.91□□□□□ -0.34
RGPD6-204ENST00000446930 SLC25A4P12235 298 aa12.91□□□□□ -0.34
RGPD6-204ENST00000446930 P2RY1P47900 373 aa12.91□□□□□ -0.34
RGPD6-204ENST00000446930 RPL11P62913 178 aaKnown RBP12.91□□□□□ -0.34
RGPD6-204ENST00000446930 TMEM187Q14656 261 aa12.91□□□□□ -0.34
RGPD6-204ENST00000446930 FAM24BQ8N5W8 94 aa12.91□□□□□ -0.34
RGPD6-204ENST00000446930 LHFPL5Q8TAF8 219 aa12.91□□□□□ -0.34
RGPD6-204ENST00000446930 C11orf45Q8TAV5 145 aa12.91□□□□□ -0.34
RGPD6-204ENST00000446930 DCANP1Q8TF63 244 aa12.91□□□□□ -0.34
RGPD6-204ENST00000446930 NARS2Q96I59 477 aaKnown RBP12.91□□□□□ -0.34
RGPD6-204ENST00000446930 TMEM56-RWDD3S4R434 201 aa12.91□□□□□ -0.34
RGPD6-204ENST00000446930 AGRNO00468 2067 aa12.9□□□□□ -0.34
RGPD6-204ENST00000446930 IGHV3-66A0A0C4DH42 116 aa12.9□□□□□ -0.34
RGPD6-204ENST00000446930 A6NHS1 94 aa12.9□□□□□ -0.34
RGPD6-204ENST00000446930 CRYM-AS1A6NIL9 109 aa12.9□□□□□ -0.34
RGPD6-204ENST00000446930 RGS5O15539 181 aa12.9□□□□□ -0.34
RGPD6-204ENST00000446930 IGLC1P0CG04 106 aa12.9□□□□□ -0.34
RGPD6-204ENST00000446930 TCTAP57738 103 aa12.9□□□□□ -0.34
RGPD6-204ENST00000446930 YPEL3P61236 119 aaPredicted RBP12.9□□□□□ -0.34
RGPD6-204ENST00000446930 MLANAQ16655 118 aa12.9□□□□□ -0.34
RGPD6-204ENST00000446930 LEMD1Q68G75 181 aa12.9□□□□□ -0.34
RGPD6-204ENST00000446930 TRPT1Q86TN4 253 aaKnown RBP12.9□□□□□ -0.34
RGPD6-204ENST00000446930 PRRT1Q99946 306 aa12.9□□□□□ -0.34
RGPD6-204ENST00000446930 HRH4Q9H3N8 390 aa12.9□□□□□ -0.34
RGPD6-204ENST00000446930 RABAC1Q9UI14 185 aa12.9□□□□□ -0.34
RGPD6-204ENST00000446930 GPR132Q9UNW8 380 aa12.9□□□□□ -0.34
RGPD6-204ENST00000446930 KMT2AQ03164 3969 aa12.89□□□□□ -0.35
RGPD6-204ENST00000446930 DISC1C4P0D8 188 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms