RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 NUPR1O60356 82 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 MPV17P39210 176 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 UBTD1Q9HAC8 227 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 OTORQ9NRC9 128 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 IGKV3D-11A0A0A0MRZ8 115 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 GAGE12HA6NDE8 117 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 KLF17Q5JT82 389 aaPredicted RBP6.6□□□□□ -1.35
SMG1-202ENST00000446231 DOCK1Q14185 1865 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 A8MWV9 139 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 EFNB3Q15768 340 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 WDR83OSQ9Y284 106 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 MGST3O14880 152 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 PTGDSP41222 190 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 IFI27L1Q96BM0 104 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 EML6Q6ZMW3 1958 aa6.6□□□□□ -1.35
SMG1-202ENST00000446231 INO80CQ6PI98 192 aaPredicted RBP6.59□□□□□ -1.35
SMG1-202ENST00000446231 C12orf77C9JDV5 145 aa6.59□□□□□ -1.35
SMG1-202ENST00000446231 TMEM144Q7Z5S9 345 aa6.59□□□□□ -1.35
SMG1-202ENST00000446231 SCGB3A1Q96QR1 104 aa6.59□□□□□ -1.35
SMG1-202ENST00000446231 NABP2Q9BQ15 211 aa6.59□□□□□ -1.35
SMG1-202ENST00000446231 SCRT1Q9BWW7 348 aa6.59□□□□□ -1.35
SMG1-202ENST00000446231 C5orf63A6NC05 138 aa6.59□□□□□ -1.35
SMG1-202ENST00000446231 RNF166Q96A37 237 aaPredicted RBP6.59□□□□□ -1.35
SMG1-202ENST00000446231 C18orf15Q96N68 181 aa6.59□□□□□ -1.35
SMG1-202ENST00000446231 CDCP2Q5VXM1 449 aa6.59□□□□□ -1.35
SMG1-202ENST00000446231 EPDR1Q9UM22 224 aa6.59□□□□□ -1.35
SMG1-202ENST00000446231 PAPPAQ13219 1627 aa6.59□□□□□ -1.35
SMG1-202ENST00000446231 REG1BP48304 166 aa6.59□□□□□ -1.35
SMG1-202ENST00000446231 FLVCR1-AS1Q8TAF5 88 aa6.59□□□□□ -1.35
SMG1-202ENST00000446231 ZNF581Q9P0T4 197 aa6.59□□□□□ -1.35
SMG1-202ENST00000446231 ZIC3O60481 467 aa6.59□□□□□ -1.35
SMG1-202ENST00000446231 PPDPFLQ8WWR9 84 aa6.59□□□□□ -1.35
SMG1-202ENST00000446231 OR9G9P0C7N8 305 aa6.59□□□□□ -1.35
SMG1-202ENST00000446231 LGALS3P17931 250 aaKnown RBP6.59□□□□□ -1.35
SMG1-202ENST00000446231 IL18BPO95998 194 aa6.59□□□□□ -1.35
SMG1-202ENST00000446231 RBPJQ06330 500 aa6.59□□□□□ -1.35
SMG1-202ENST00000446231 ZNF716A6NP11 495 aa6.59□□□□□ -1.36
SMG1-202ENST00000446231 FMC1Q96HJ9 113 aa6.59□□□□□ -1.36
SMG1-202ENST00000446231 COL11A1P12107 1806 aaPredicted RBP6.59□□□□□ -1.36
SMG1-202ENST00000446231 TRAV5A0A0B4J249 113 aa6.59□□□□□ -1.36
SMG1-202ENST00000446231 EMP1P54849 157 aa6.59□□□□□ -1.36
SMG1-202ENST00000446231 DCTN5Q9BTE1 182 aa6.59□□□□□ -1.36
SMG1-202ENST00000446231 SPINK14Q6IE38 97 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 MGST2Q99735 147 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 SLC25A2Q9BXI2 301 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 NGBQ9NPG2 151 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 TSPAN13O95857 204 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 IGHV3-48P01763 117 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 AREGP15514 252 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 GATA2P23769 480 aaPredicted RBP6.58□□□□□ -1.36
SMG1-202ENST00000446231 GGTLC1Q9BX51 225 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 SPANXN1Q5VSR9 72 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 DEFB125Q8N687 156 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 PHF7Q9BWX1 381 aaPredicted RBP6.58□□□□□ -1.36
SMG1-202ENST00000446231 TRGV5A0A0B4J1U4 118 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 FAM90A9PA6NNJ1 464 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 ZNF826PQ6ZT77 177 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 MRAP2Q96G30 205 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 TIAF1O95411 115 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 PILRBQ9UKJ0 227 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 GLI3P10071 1580 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 PRSS47A8MTI9 375 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 VEGFBP49765 207 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 Q6ZS49 121 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 LINC00305Q7Z4B0 112 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 RND1Q92730 232 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 HCFC1P51610 2035 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 TRAV8-1A0A0A6YYK1 113 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 ZNF441Q8N8Z8 693 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 KLF13Q9Y2Y9 288 aaPredicted RBP6.58□□□□□ -1.36
SMG1-202ENST00000446231 LYZL6O75951 148 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 COX8AP10176 69 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 IFNL4K9M1U5 179 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 SFTA2Q6UW10 78 aa6.58□□□□□ -1.36
SMG1-202ENST00000446231 MCRIP2Q9BUT9 160 aaKnown RBP6.58□□□□□ -1.36
SMG1-202ENST00000446231 ZNF138P52744 262 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 DLX4Q92988 240 aaPredicted RBP6.57□□□□□ -1.36
SMG1-202ENST00000446231 FER1L6-AS2Q96M78 137 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 F2Z2F3 143 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 IGLL1P15814 213 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 SH2D7A6NKC9 451 aaPredicted RBP6.57□□□□□ -1.36
SMG1-202ENST00000446231 TNFRSF1AP19438 455 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 ZNF497Q6ZNH5 498 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 RPRMLQ8N4K4 120 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 ZNF726P1Q15940 193 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 TMPRSS2O15393 492 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 APELAP0DMC3 54 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 SMPXQ9UHP9 88 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 TRAV2A0A0B4J234 112 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 NBEAP1P0C6P0 100 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 KLF5Q13887 457 aaPredicted RBP6.57□□□□□ -1.36
SMG1-202ENST00000446231 CFHR5Q9BXR6 569 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 PNRC2Q9NPJ4 139 aaKnown RBP6.57□□□□□ -1.36
SMG1-202ENST00000446231 MEOX1P50221 254 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 NPFFR1Q9GZQ6 430 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 NTF4P34130 210 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 SPANXA1Q9NS26 97 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 IGF2RP11717 2491 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 NDUFB3O43676 98 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 GOSR1O95249 250 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms