RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 NANOS1Q8WY41 292 aaKnown RBP11.38□□□□□ -0.59
VPS52-212ENST00000445902 IFI27L2Q9H2X8 130 aa11.38□□□□□ -0.59
VPS52-212ENST00000445902 OR51B2Q9Y5P1 312 aa11.38□□□□□ -0.59
VPS52-212ENST00000445902 IGHV3OR15-7A0A075B7D8 119 aa11.38□□□□□ -0.59
VPS52-212ENST00000445902 TMEM11P17152 192 aa11.38□□□□□ -0.59
VPS52-212ENST00000445902 SLC25A2Q9BXI2 301 aa11.38□□□□□ -0.59
VPS52-212ENST00000445902 SCRT2Q9NQ03 307 aa11.38□□□□□ -0.59
VPS52-212ENST00000445902 DCHS1Q96JQ0 3298 aa11.38□□□□□ -0.59
VPS52-212ENST00000445902 C7orf71A4D174 169 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 FABP6P51161 128 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 SSBP2P81877 361 aaPredicted RBP11.37□□□□□ -0.59
VPS52-212ENST00000445902 CLEC2AQ6UVW9 174 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 PGLYRP4Q96LB8 373 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 SPOCK3Q9BQ16 436 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 TTTY12Q9BZ98 90 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 TMEM191AQ9H0A3 160 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 IDI2-AS1Q9NZ38 188 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 ABCA1O95477 2261 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 J3QR06 171 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 AGFG2O95081 481 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 OR4S2Q8NH73 311 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 CHRDL1Q9BU40 450 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 IQCF6A8MYZ5 107 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 PEX7O00628 323 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 OR2J3O76001 311 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 MRPL49Q13405 166 aaKnown RBP11.37□□□□□ -0.59
VPS52-212ENST00000445902 ZNRF1Q8ND25 227 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 OR10W1Q8NGF6 305 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 LRRC29Q8WV35 223 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 TMEM14BQ9NUH8 114 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 B4GALT7Q9UBV7 327 aa11.37□□□□□ -0.59
VPS52-212ENST00000445902 FAM231BA6NCW3 169 aa11.36□□□□□ -0.59
VPS52-212ENST00000445902 CD5LO43866 347 aa11.36□□□□□ -0.59
VPS52-212ENST00000445902 CD46P15529 392 aa11.36□□□□□ -0.59
VPS52-212ENST00000445902 RASL11AQ6T310 242 aa11.36□□□□□ -0.59
VPS52-212ENST00000445902 TMEM251Q8N6I4 163 aa11.36□□□□□ -0.59
VPS52-212ENST00000445902 FAM167A-AS1Q96KT0 104 aa11.36□□□□□ -0.59
VPS52-212ENST00000445902 FAM173AQ9BQD7 235 aa11.36□□□□□ -0.59
VPS52-212ENST00000445902 ZNF835Q9Y2P0 537 aa11.36□□□□□ -0.59
VPS52-212ENST00000445902 GAGE10A6NGK3 116 aa11.36□□□□□ -0.59
VPS52-212ENST00000445902 TIMM8AO60220 97 aaPredicted RBP11.36□□□□□ -0.59
VPS52-212ENST00000445902 GPR183P32249 361 aa11.36□□□□□ -0.59
VPS52-212ENST00000445902 SMIM21Q3B7S5 101 aa11.36□□□□□ -0.59
VPS52-212ENST00000445902 FAM71F2Q6NXP2 309 aa11.36□□□□□ -0.59
VPS52-212ENST00000445902 PEF1Q9UBV8 284 aaKnown RBP11.36□□□□□ -0.59
VPS52-212ENST00000445902 CFAP47Q6ZTR5 3102 aa11.35□□□□□ -0.59
VPS52-212ENST00000445902 CRXO43186 299 aaPredicted RBP11.35□□□□□ -0.59
VPS52-212ENST00000445902 TNFSF15O95150 251 aa11.35□□□□□ -0.59
VPS52-212ENST00000445902 GOSR1O95249 250 aa11.35□□□□□ -0.59
VPS52-212ENST00000445902 IGLC1P0CG04 106 aa11.35□□□□□ -0.59
VPS52-212ENST00000445902 SAA2P0DJI9 122 aaPredicted RBP11.35□□□□□ -0.59
VPS52-212ENST00000445902 PRDX2P32119 198 aa11.35□□□□□ -0.59
VPS52-212ENST00000445902 LINC00322Q6ZN03 302 aaPredicted RBP11.35□□□□□ -0.59
VPS52-212ENST00000445902 ZNF329Q86UD4 541 aa11.35□□□□□ -0.59
VPS52-212ENST00000445902 FAM90A1Q86YD7 464 aa11.35□□□□□ -0.59
VPS52-212ENST00000445902 TEX45Q8NA69 505 aa11.35□□□□□ -0.59
VPS52-212ENST00000445902 CT55Q8WUE5 264 aa11.35□□□□□ -0.59
VPS52-212ENST00000445902 BLNKQ8WV28 456 aa11.35□□□□□ -0.59
VPS52-212ENST00000445902 FOXA2Q9Y261 457 aaPredicted RBP11.35□□□□□ -0.59
VPS52-212ENST00000445902 DSCAMO60469 2012 aa11.35□□□□□ -0.59
VPS52-212ENST00000445902 ZNF318Q5VUA4 2279 aa11.35□□□□□ -0.59
VPS52-212ENST00000445902 PRB4P10163 310 aaPredicted RBP11.35□□□□□ -0.59
VPS52-212ENST00000445902 LOXL3P58215 753 aa11.35□□□□□ -0.59
VPS52-212ENST00000445902 RPS20P60866 119 aaKnown RBP11.35□□□□□ -0.59
VPS52-212ENST00000445902 HBBP68871 147 aa11.35□□□□□ -0.59
VPS52-212ENST00000445902 OR1B1Q8NGR6 318 aa11.35□□□□□ -0.59
VPS52-212ENST00000445902 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.34□□□□□ -0.59
VPS52-212ENST00000445902 ARF6P62330 175 aa11.34□□□□□ -0.59
VPS52-212ENST00000445902 DDB2Q92466 427 aa11.34□□□□□ -0.59
VPS52-212ENST00000445902 SMIM12Q96EX1 92 aa11.34□□□□□ -0.59
VPS52-212ENST00000445902 DEFB127Q9H1M4 99 aa11.34□□□□□ -0.59
VPS52-212ENST00000445902 ZNRD1Q9P1U0 126 aa11.34□□□□□ -0.59
VPS52-212ENST00000445902 A0A1B0GXF2 115 aa11.34□□□□□ -0.59
VPS52-212ENST00000445902 H3BTX0 84 aa11.34□□□□□ -0.59
VPS52-212ENST00000445902 CFIP05156 583 aa11.34□□□□□ -0.59
VPS52-212ENST00000445902 HIST1H1EP10412 219 aaKnown RBP11.34□□□□□ -0.59
VPS52-212ENST00000445902 HIST1H1AQ02539 215 aaPredicted RBP11.34□□□□□ -0.59
VPS52-212ENST00000445902 FER1L6-AS1Q8NA97 138 aa11.34□□□□□ -0.59
VPS52-212ENST00000445902 PAXXQ9BUH6 204 aa11.34□□□□□ -0.59
VPS52-212ENST00000445902 MAP1LC3CQ9BXW4 147 aa11.34□□□□□ -0.59
VPS52-212ENST00000445902 HILPDAQ9Y5L2 63 aa11.34□□□□□ -0.59
VPS52-212ENST00000445902 FAM231DQ6ZW35 169 aa11.34□□□□□ -0.59
VPS52-212ENST00000445902 TMEM116Q8NCL8 245 aa11.34□□□□□ -0.59
VPS52-212ENST00000445902 PRR7Q8TB68 274 aa11.34□□□□□ -0.59
VPS52-212ENST00000445902 CXXC4Q9H2H0 198 aa11.34□□□□□ -0.59
VPS52-212ENST00000445902 JPT1Q9UK76 154 aa11.34□□□□□ -0.59
VPS52-212ENST00000445902 LOC400499M0QZD8 3231 aa11.33□□□□□ -0.6
VPS52-212ENST00000445902 KLK10O43240 276 aa11.33□□□□□ -0.6
VPS52-212ENST00000445902 HTR1DP28221 377 aa11.33□□□□□ -0.6
VPS52-212ENST00000445902 GTSF1Q8WW33 167 aa11.33□□□□□ -0.6
VPS52-212ENST00000445902 JMJD8Q96S16 334 aa11.33□□□□□ -0.6
VPS52-212ENST00000445902 IGKV1D-17A0A075B6S4 117 aa11.33□□□□□ -0.6
VPS52-212ENST00000445902 COX7A2P2O60397 106 aa11.33□□□□□ -0.6
VPS52-212ENST00000445902 IGKV1-16P04430 117 aa11.33□□□□□ -0.6
VPS52-212ENST00000445902 CT45A1Q5HYN5 189 aa11.33□□□□□ -0.6
VPS52-212ENST00000445902 C2orf91Q6ZV80 131 aa11.33□□□□□ -0.6
VPS52-212ENST00000445902 CT45A3Q8NHU0 189 aa11.33□□□□□ -0.6
VPS52-212ENST00000445902 DSCAML1Q8TD84 2053 aa11.33□□□□□ -0.6
VPS52-212ENST00000445902 IGFBP4P22692 258 aa11.32□□□□□ -0.6
VPS52-212ENST00000445902 ABHD17BQ5VST6 288 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms