RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 NPY1RP25929 384 aa18.18■□□□□ 0.5
C9orf3-207ENST00000445181 FCGR2BP31994 310 aaPredicted RBP18.18■□□□□ 0.5
C9orf3-207ENST00000445181 RELQ04864 619 aaPredicted RBP18.18■□□□□ 0.5
C9orf3-207ENST00000445181 C2orf83Q53S99 150 aa18.18■□□□□ 0.5
C9orf3-207ENST00000445181 C11orf87Q6NUJ2 197 aa18.18■□□□□ 0.5
C9orf3-207ENST00000445181 NOXA1Q86UR1 476 aa18.18■□□□□ 0.5
C9orf3-207ENST00000445181 OR52B4Q8NGK2 314 aa18.18■□□□□ 0.5
C9orf3-207ENST00000445181 RPS10-NUDT3A0A1W2PQS6 291 aa18.17■□□□□ 0.5
C9orf3-207ENST00000445181 A8MWP6 167 aa18.17■□□□□ 0.5
C9orf3-207ENST00000445181 NDUFA4O00483 81 aa18.17■□□□□ 0.5
C9orf3-207ENST00000445181 H2AFB2P0C5Z0 115 aa18.17■□□□□ 0.5
C9orf3-207ENST00000445181 EDN2P20800 178 aa18.17■□□□□ 0.5
C9orf3-207ENST00000445181 ADMP35318 185 aa18.17■□□□□ 0.5
C9orf3-207ENST00000445181 TM4SF20Q53R12 229 aa18.17■□□□□ 0.5
C9orf3-207ENST00000445181 LCN12Q6JVE5 192 aa18.17■□□□□ 0.5
C9orf3-207ENST00000445181 ENKURQ8TC29 256 aa18.17■□□□□ 0.5
C9orf3-207ENST00000445181 CACNG8Q8WXS5 425 aa18.17■□□□□ 0.5
C9orf3-207ENST00000445181 C20orf24Q9BUV8 137 aa18.17■□□□□ 0.5
C9orf3-207ENST00000445181 LSM4Q9Y4Z0 139 aaKnown RBP18.17■□□□□ 0.5
C9orf3-207ENST00000445181 U3KQ87 197 aa18.17■□□□□ 0.5
C9orf3-207ENST00000445181 TMEM213A2RRL7 107 aa18.16■□□□□ 0.5
C9orf3-207ENST00000445181 FAM90A26D6RGX4 464 aa18.16■□□□□ 0.5
C9orf3-207ENST00000445181 MED6O75586 246 aa18.16■□□□□ 0.5
C9orf3-207ENST00000445181 CBLN1P23435 193 aa18.16■□□□□ 0.5
C9orf3-207ENST00000445181 ADAMTSL5Q6ZMM2 481 aa18.16■□□□□ 0.5
C9orf3-207ENST00000445181 RNASEH2CQ8TDP1 164 aaKnown RBP18.16■□□□□ 0.5
C9orf3-207ENST00000445181 TMEM190Q8WZ59 177 aa18.16■□□□□ 0.5
C9orf3-207ENST00000445181 YIF1AO95070 293 aa18.15■□□□□ 0.5
C9orf3-207ENST00000445181 MLANAQ16655 118 aa18.15■□□□□ 0.5
C9orf3-207ENST00000445181 MITD1Q8WV92 249 aa18.15■□□□□ 0.5
C9orf3-207ENST00000445181 FNDC4Q9H6D8 234 aaPredicted RBP18.15■□□□□ 0.5
C9orf3-207ENST00000445181 TECRQ9NZ01 308 aaKnown RBP18.15■□□□□ 0.5
C9orf3-207ENST00000445181 COL7A1Q02388 2944 aa18.15■□□□□ 0.5
C9orf3-207ENST00000445181 SCGB2A1O75556 95 aa18.14■□□□□ 0.49
C9orf3-207ENST00000445181 IAPPP10997 89 aa18.14■□□□□ 0.49
C9orf3-207ENST00000445181 ELLP55199 621 aaPredicted RBP18.14■□□□□ 0.49
C9orf3-207ENST00000445181 IFITM3Q01628 133 aa18.14■□□□□ 0.49
C9orf3-207ENST00000445181 CD300EQ496F6 205 aaPredicted RBP18.14■□□□□ 0.49
C9orf3-207ENST00000445181 UXS1Q8NBZ7 420 aa18.14■□□□□ 0.49
C9orf3-207ENST00000445181 OR2K2Q8NGT1 345 aa18.14■□□□□ 0.49
C9orf3-207ENST00000445181 MARC2Q969Z3 335 aa18.14■□□□□ 0.49
C9orf3-207ENST00000445181 MAGT1Q9H0U3 335 aa18.14■□□□□ 0.49
C9orf3-207ENST00000445181 IGHV3OR16-8A0A075B7F1 116 aa18.13■□□□□ 0.49
C9orf3-207ENST00000445181 IFNA4P05014 189 aa18.13■□□□□ 0.49
C9orf3-207ENST00000445181 ETFRF1Q6IPR1 90 aa18.13■□□□□ 0.49
C9orf3-207ENST00000445181 TMEM170AQ8WVE7 144 aa18.13■□□□□ 0.49
C9orf3-207ENST00000445181 SEC22CQ9BRL7 303 aa18.13■□□□□ 0.49
C9orf3-207ENST00000445181 DAZ1Q9NQZ3 744 aaKnown RBP18.13■□□□□ 0.49
C9orf3-207ENST00000445181 IZUMO1RA6ND01 250 aa18.12■□□□□ 0.49
C9orf3-207ENST00000445181 MPTX1A8MV57 137 aa18.12■□□□□ 0.49
C9orf3-207ENST00000445181 SYNGR2O43760 224 aa18.12■□□□□ 0.49
C9orf3-207ENST00000445181 TMEM50AO95807 157 aa18.12■□□□□ 0.49
C9orf3-207ENST00000445181 DEFA1P59665 94 aa18.12■□□□□ 0.49
C9orf3-207ENST00000445181 DEFA3P59666 94 aa18.12■□□□□ 0.49
C9orf3-207ENST00000445181 DEFB114Q30KQ6 69 aa18.12■□□□□ 0.49
C9orf3-207ENST00000445181 OR4X1Q8NH49 305 aa18.12■□□□□ 0.49
C9orf3-207ENST00000445181 ZNF431Q8TF32 576 aaPredicted RBP18.12■□□□□ 0.49
C9orf3-207ENST00000445181 CIB3Q96Q77 187 aaPredicted RBP18.12■□□□□ 0.49
C9orf3-207ENST00000445181 MRPL27Q9P0M9 148 aaKnown RBP18.12■□□□□ 0.49
C9orf3-207ENST00000445181 PAIP2BQ9ULR5 123 aaKnown RBP18.12■□□□□ 0.49
C9orf3-207ENST00000445181 SELENOKQ9Y6D0 94 aa18.12■□□□□ 0.49
C9orf3-207ENST00000445181 WRBO00258 174 aa18.11■□□□□ 0.49
C9orf3-207ENST00000445181 ZNF207O43670 478 aaKnown RBP18.11■□□□□ 0.49
C9orf3-207ENST00000445181 CLN5O75503 358 aa18.11■□□□□ 0.49
C9orf3-207ENST00000445181 SLC25A4P12235 298 aa18.11■□□□□ 0.49
C9orf3-207ENST00000445181 ATP5IP56385 69 aaPredicted RBP18.11■□□□□ 0.49
C9orf3-207ENST00000445181 MRPL36Q9P0J6 103 aaKnown RBP18.11■□□□□ 0.49
C9orf3-207ENST00000445181 RAB11AP62491 216 aa18.1■□□□□ 0.49
C9orf3-207ENST00000445181 RPP30P78346 268 aaKnown RBP18.1■□□□□ 0.49
C9orf3-207ENST00000445181 IAH1Q2TAA2 248 aaPredicted RBP18.1■□□□□ 0.49
C9orf3-207ENST00000445181 BTNL8Q6UX41 500 aa18.1■□□□□ 0.49
C9orf3-207ENST00000445181 MLXQ9UH92 298 aa18.1■□□□□ 0.49
C9orf3-207ENST00000445181 SMAD5-AS1Q9Y6J3 95 aa18.1■□□□□ 0.49
C9orf3-207ENST00000445181 C15orf62A8K5M9 175 aa18.09■□□□□ 0.49
C9orf3-207ENST00000445181 NKX2-1P43699 371 aaPredicted RBP18.09■□□□□ 0.49
C9orf3-207ENST00000445181 RND2P52198 227 aa18.09■□□□□ 0.49
C9orf3-207ENST00000445181 GUCA2BQ16661 112 aa18.09■□□□□ 0.49
C9orf3-207ENST00000445181 PRSS54Q6PEW0 395 aa18.09■□□□□ 0.49
C9orf3-207ENST00000445181 ZNF600Q6ZNG1 722 aa18.09■□□□□ 0.49
C9orf3-207ENST00000445181 GTSCR1Q86UQ5 136 aa18.09■□□□□ 0.49
C9orf3-207ENST00000445181 GSKIPQ9P0R6 139 aa18.09■□□□□ 0.49
C9orf3-207ENST00000445181 TRAV30A0A087WSZ9 112 aa18.08■□□□□ 0.48
C9orf3-207ENST00000445181 FAM25EA8MYX2 175 aa18.08■□□□□ 0.48
C9orf3-207ENST00000445181 K7EMT4 169 aa18.08■□□□□ 0.48
C9orf3-207ENST00000445181 SCGB1D2O95969 90 aa18.08■□□□□ 0.48
C9orf3-207ENST00000445181 NHLRC4P0CG21 123 aaPredicted RBP18.08■□□□□ 0.48
C9orf3-207ENST00000445181 C8orf88P0DMB2 117 aa18.08■□□□□ 0.48
C9orf3-207ENST00000445181 SLC16A13Q7RTY0 426 aa18.08■□□□□ 0.48
C9orf3-207ENST00000445181 NRARPQ7Z6K4 114 aa18.08■□□□□ 0.48
C9orf3-207ENST00000445181 C12orf45Q8N5I9 185 aaPredicted RBP18.08■□□□□ 0.48
C9orf3-207ENST00000445181 OR4D5Q8NGN0 318 aa18.08■□□□□ 0.48
C9orf3-207ENST00000445181 ACY3Q96HD9 319 aa18.08■□□□□ 0.48
C9orf3-207ENST00000445181 OR10C1Q96KK4 312 aa18.08■□□□□ 0.48
C9orf3-207ENST00000445181 DNAH9Q9NYC9 4486 aa18.07■□□□□ 0.48
C9orf3-207ENST00000445181 CCSO14618 274 aa18.07■□□□□ 0.48
C9orf3-207ENST00000445181 RBPMS2Q6ZRY4 209 aaKnown RBP18.07■□□□□ 0.48
C9orf3-207ENST00000445181 ZBTB8BQ8NAP8 495 aaPredicted RBP18.07■□□□□ 0.48
C9orf3-207ENST00000445181 WDR89Q96FK6 387 aaPredicted RBP18.07■□□□□ 0.48
C9orf3-207ENST00000445181 GINS3Q9BRX5 216 aa18.07■□□□□ 0.48
C9orf3-207ENST00000445181 PUS1Q9Y606 427 aaKnown RBP eCLIP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms