RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 C2orf50Q96LR7 162 aa10.84□□□□□ -0.67
SSBP3-208ENST00000444533 RAB40CQ96S21 281 aa10.84□□□□□ -0.67
SSBP3-208ENST00000444533 STRAPQ9Y3F4 350 aaKnown RBP10.84□□□□□ -0.67
SSBP3-208ENST00000444533 TRAV30A0A087WSZ9 112 aa10.83□□□□□ -0.68
SSBP3-208ENST00000444533 SSSCA1O60232 199 aa10.83□□□□□ -0.68
SSBP3-208ENST00000444533 OR2C1O95371 312 aa10.83□□□□□ -0.68
SSBP3-208ENST00000444533 CYCSP99999 105 aaKnown RBP10.83□□□□□ -0.68
SSBP3-208ENST00000444533 OXLD1Q5BKU9 147 aa10.83□□□□□ -0.68
SSBP3-208ENST00000444533 SPANXN5Q5MJ07 72 aa10.83□□□□□ -0.68
SSBP3-208ENST00000444533 GPHB5Q86YW7 130 aa10.83□□□□□ -0.68
SSBP3-208ENST00000444533 OR9G4Q8NGQ1 327 aa10.83□□□□□ -0.68
SSBP3-208ENST00000444533 OR10C1Q96KK4 312 aa10.83□□□□□ -0.68
SSBP3-208ENST00000444533 ZC4H2Q9NQZ6 224 aa10.83□□□□□ -0.68
SSBP3-208ENST00000444533 PSENENQ9NZ42 101 aa10.83□□□□□ -0.68
SSBP3-208ENST00000444533 GOSR2O14653 212 aa10.82□□□□□ -0.68
SSBP3-208ENST00000444533 RLN2P04090 185 aa10.82□□□□□ -0.68
SSBP3-208ENST00000444533 FCGR2BP31994 310 aaPredicted RBP10.82□□□□□ -0.68
SSBP3-208ENST00000444533 POLR2GP62487 172 aaKnown RBP eCLIP10.82□□□□□ -0.68
SSBP3-208ENST00000444533 PVRIGQ6DKI7 326 aa10.82□□□□□ -0.68
SSBP3-208ENST00000444533 SLC35E1Q96K37 410 aa10.82□□□□□ -0.68
SSBP3-208ENST00000444533 UFC1Q9Y3C8 167 aa10.82□□□□□ -0.68
SSBP3-208ENST00000444533 G3V4G9 280 aa10.81□□□□□ -0.68
SSBP3-208ENST00000444533 LGALS9O00182 355 aa10.81□□□□□ -0.68
SSBP3-208ENST00000444533 YIF1AO95070 293 aa10.81□□□□□ -0.68
SSBP3-208ENST00000444533 SCAF4O95104 1147 aaKnown RBP10.81□□□□□ -0.68
SSBP3-208ENST00000444533 IGHV3-48P01763 117 aa10.81□□□□□ -0.68
SSBP3-208ENST00000444533 TAS2R30P59541 319 aa10.81□□□□□ -0.68
SSBP3-208ENST00000444533 S100A10P60903 97 aa10.81□□□□□ -0.68
SSBP3-208ENST00000444533 SAMD5Q5TGI4 173 aa10.81□□□□□ -0.68
SSBP3-208ENST00000444533 OR4X1Q8NH49 305 aa10.81□□□□□ -0.68
SSBP3-208ENST00000444533 CACNG8Q8WXS5 425 aa10.81□□□□□ -0.68
SSBP3-208ENST00000444533 LSM5Q9Y4Y9 91 aaKnown RBP10.81□□□□□ -0.68
SSBP3-208ENST00000444533 NDUFA4O00483 81 aa10.8□□□□□ -0.68
SSBP3-208ENST00000444533 FABP1P07148 127 aa10.8□□□□□ -0.68
SSBP3-208ENST00000444533 SPNP16150 400 aa10.8□□□□□ -0.68
SSBP3-208ENST00000444533 GPX4P36969 197 aaPredicted RBP10.8□□□□□ -0.68
SSBP3-208ENST00000444533 BCAP31P51572 246 aa10.8□□□□□ -0.68
SSBP3-208ENST00000444533 SLC16A13Q7RTY0 426 aa10.8□□□□□ -0.68
SSBP3-208ENST00000444533 REC114Q7Z4M0 266 aa10.8□□□□□ -0.68
SSBP3-208ENST00000444533 DYNLRB2Q8TF09 96 aa10.8□□□□□ -0.68
SSBP3-208ENST00000444533 SMIM8Q96KF7 97 aa10.8□□□□□ -0.68
SSBP3-208ENST00000444533 MGAM2Q2M2H8 2515 aa10.79□□□□□ -0.68
SSBP3-208ENST00000444533 IGHV3-35A0A0C4DH35 117 aa10.79□□□□□ -0.68
SSBP3-208ENST00000444533 H3BP45 60 aa10.79□□□□□ -0.68
SSBP3-208ENST00000444533 TSC22D2O75157 780 aa10.79□□□□□ -0.68
SSBP3-208ENST00000444533 CLN5O75503 358 aa10.79□□□□□ -0.68
SSBP3-208ENST00000444533 MBPP02686 304 aaPredicted RBP10.79□□□□□ -0.68
SSBP3-208ENST00000444533 PET100P0DJ07 73 aa10.79□□□□□ -0.68
SSBP3-208ENST00000444533 BMI1P35226 326 aa10.79□□□□□ -0.68
SSBP3-208ENST00000444533 RND2P52198 227 aa10.79□□□□□ -0.68
SSBP3-208ENST00000444533 CD69Q07108 199 aa10.79□□□□□ -0.68
SSBP3-208ENST00000444533 MARC2Q969Z3 335 aa10.79□□□□□ -0.68
SSBP3-208ENST00000444533 ACY3Q96HD9 319 aa10.79□□□□□ -0.68
SSBP3-208ENST00000444533 GINS3Q9BRX5 216 aa10.79□□□□□ -0.68
SSBP3-208ENST00000444533 C20orf24Q9BUV8 137 aa10.79□□□□□ -0.68
SSBP3-208ENST00000444533 NMES1Q9C002 83 aa10.79□□□□□ -0.68
SSBP3-208ENST00000444533 MGAT4CQ9UBM8 478 aa10.79□□□□□ -0.68
SSBP3-208ENST00000444533 TRRAPQ9Y4A5 3859 aa10.79□□□□□ -0.68
SSBP3-208ENST00000444533 C7orf66A4D0T2 115 aa10.78□□□□□ -0.68
SSBP3-208ENST00000444533 C15orf62A8K5M9 175 aa10.78□□□□□ -0.68
SSBP3-208ENST00000444533 TMEM50AO95807 157 aa10.78□□□□□ -0.68
SSBP3-208ENST00000444533 CTSGP08311 255 aa10.78□□□□□ -0.68
SSBP3-208ENST00000444533 OR10J1P30954 320 aa10.78□□□□□ -0.68
SSBP3-208ENST00000444533 ELLP55199 621 aaPredicted RBP10.78□□□□□ -0.68
SSBP3-208ENST00000444533 ZNF600Q6ZNG1 722 aa10.78□□□□□ -0.68
SSBP3-208ENST00000444533 TMEM116Q8NCL8 245 aa10.78□□□□□ -0.68
SSBP3-208ENST00000444533 OR10P1Q8NGE3 313 aa10.78□□□□□ -0.68
SSBP3-208ENST00000444533 OR1S2Q8NGQ3 325 aa10.78□□□□□ -0.68
SSBP3-208ENST00000444533 NARS2Q96I59 477 aaKnown RBP10.78□□□□□ -0.68
SSBP3-208ENST00000444533 ZNF436Q9C0F3 470 aaPredicted RBP10.78□□□□□ -0.68
SSBP3-208ENST00000444533 MED28Q9H204 178 aa10.78□□□□□ -0.68
SSBP3-208ENST00000444533 FNDC4Q9H6D8 234 aaPredicted RBP10.78□□□□□ -0.68
SSBP3-208ENST00000444533 DAZ1Q9NQZ3 744 aaKnown RBP10.78□□□□□ -0.68
SSBP3-208ENST00000444533 SIGLEC8Q9NYZ4 499 aa10.78□□□□□ -0.68
SSBP3-208ENST00000444533 RCL1Q9Y2P8 373 aaKnown RBP10.78□□□□□ -0.68
SSBP3-208ENST00000444533 ALG5Q9Y673 324 aa10.78□□□□□ -0.68
SSBP3-208ENST00000444533 VWFP04275 2813 aa10.78□□□□□ -0.68
SSBP3-208ENST00000444533 ZFP92A6NM28 416 aa10.77□□□□□ -0.69
SSBP3-208ENST00000444533 K7EPK0 472 aa10.77□□□□□ -0.69
SSBP3-208ENST00000444533 CAV2P51636 162 aa10.77□□□□□ -0.69
SSBP3-208ENST00000444533 OR8G2PQ6IF36 304 aa10.77□□□□□ -0.69
SSBP3-208ENST00000444533 PRSS54Q6PEW0 395 aa10.77□□□□□ -0.69
SSBP3-208ENST00000444533 Q8WTZ3 238 aa10.77□□□□□ -0.69
SSBP3-208ENST00000444533 NPIPB3Q92617 1050 aa10.77□□□□□ -0.69
SSBP3-208ENST00000444533 CHRDL1Q9BU40 450 aa10.77□□□□□ -0.69
SSBP3-208ENST00000444533 SMCO3A2RU48 225 aa10.76□□□□□ -0.69
SSBP3-208ENST00000444533 C2orf70A6NJV1 201 aa10.76□□□□□ -0.69
SSBP3-208ENST00000444533 A8MWP6 167 aa10.76□□□□□ -0.69
SSBP3-208ENST00000444533 F8W735 103 aaPredicted RBP10.76□□□□□ -0.69
SSBP3-208ENST00000444533 WIPF1O43516 503 aa10.76□□□□□ -0.69
SSBP3-208ENST00000444533 SIX6O95475 246 aa10.76□□□□□ -0.69
SSBP3-208ENST00000444533 AKR1C1Q04828 323 aa10.76□□□□□ -0.69
SSBP3-208ENST00000444533 RAB32Q13637 225 aa10.76□□□□□ -0.69
SSBP3-208ENST00000444533 MLANAQ16655 118 aa10.76□□□□□ -0.69
SSBP3-208ENST00000444533 BEAN1Q3B7T3 259 aa10.76□□□□□ -0.69
SSBP3-208ENST00000444533 LCN12Q6JVE5 192 aa10.76□□□□□ -0.69
SSBP3-208ENST00000444533 C11orf87Q6NUJ2 197 aa10.76□□□□□ -0.69
SSBP3-208ENST00000444533 STX12Q86Y82 276 aa10.76□□□□□ -0.69
SSBP3-208ENST00000444533 TMEM170AQ8WVE7 144 aa10.76□□□□□ -0.69
SSBP3-208ENST00000444533 TMEM190Q8WZ59 177 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms