RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 ARL17AQ8IVW1 177 aa9.37□□□□□ -0.91
FN1-211ENST00000443816 A0A1B0GW15 77 aa9.37□□□□□ -0.91
FN1-211ENST00000443816 CXorf65A6NEN9 183 aa9.37□□□□□ -0.91
FN1-211ENST00000443816 LYNX1G3V0Z9 82 aa9.37□□□□□ -0.91
FN1-211ENST00000443816 UPK2O00526 184 aa9.37□□□□□ -0.91
FN1-211ENST00000443816 LYNX1P0DP58 116 aa9.37□□□□□ -0.91
FN1-211ENST00000443816 IGFBP2P18065 325 aa9.37□□□□□ -0.91
FN1-211ENST00000443816 C11orf44Q8N8P7 122 aa9.37□□□□□ -0.91
FN1-211ENST00000443816 FAM90A9PA6NNJ1 464 aa9.37□□□□□ -0.91
FN1-211ENST00000443816 DANCRP0C864 163 aa9.37□□□□□ -0.91
FN1-211ENST00000443816 TEX38Q6PEX7 206 aa9.37□□□□□ -0.91
FN1-211ENST00000443816 Q6ZS92 163 aa9.37□□□□□ -0.91
FN1-211ENST00000443816 GGNQ86UU5 652 aa9.37□□□□□ -0.91
FN1-211ENST00000443816 ZCCHC24Q8N2G6 241 aaKnown RBP9.37□□□□□ -0.91
FN1-211ENST00000443816 TRAV41A0A0B4J266 112 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 OR9G9P0C7N8 305 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 SIGLEC15Q6ZMC9 328 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 OR9G4Q8NGQ1 327 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 Q9H3A6 140 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 A0A087X0M5 115 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 IGHV2-26A0A0B4J1V2 119 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 A0A1B0GX30 115 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 UCP1P25874 307 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 CIARTQ8N365 385 aaPredicted RBP9.36□□□□□ -0.91
FN1-211ENST00000443816 GTF3AQ92664 365 aaKnown RBP9.36□□□□□ -0.91
FN1-211ENST00000443816 ATP5LO75964 103 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 PARLQ9H300 379 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 CRIM1Q9NZV1 1036 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 TRGV11A0A075B6L2 103 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 LINC00862A6NCI5 91 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 J3QKU1 62 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 TIMM23O14925 209 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 TRAV21A0A0B4J279 112 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 A0A1B0GUT8 65 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 C17orf82Q86X59 251 aaPredicted RBP9.36□□□□□ -0.91
FN1-211ENST00000443816 PRO1933Q9H354 126 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 TRAV24A0A0B4J272 114 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 C7orf71A4D174 169 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 COTL1Q14019 142 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 MDS2Q8NDY4 140 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 PRADC1Q9BSG0 188 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 OTORQ9NRC9 128 aa9.36□□□□□ -0.91
FN1-211ENST00000443816 ELF5Q9UKW6 265 aaPredicted RBP9.36□□□□□ -0.91
FN1-211ENST00000443816 MBD3L4A6NDZ8 208 aaPredicted RBP9.35□□□□□ -0.91
FN1-211ENST00000443816 MBD3L3A6NE82 208 aaPredicted RBP9.35□□□□□ -0.91
FN1-211ENST00000443816 MBD3L5A6NJ08 208 aaPredicted RBP9.35□□□□□ -0.91
FN1-211ENST00000443816 CNTFRP26992 372 aa9.35□□□□□ -0.91
FN1-211ENST00000443816 TMEM170BQ5T4T1 132 aa9.35□□□□□ -0.91
FN1-211ENST00000443816 MBD3L2Q8NHZ7 208 aaPredicted RBP9.35□□□□□ -0.91
FN1-211ENST00000443816 TMEM190Q8WZ59 177 aa9.35□□□□□ -0.91
FN1-211ENST00000443816 EIF3GO75821 320 aaKnown RBP eCLIP9.35□□□□□ -0.91
FN1-211ENST00000443816 FAM131CQ96AQ9 280 aa9.35□□□□□ -0.91
FN1-211ENST00000443816 PMCHL2Q9BQD1 86 aa9.35□□□□□ -0.91
FN1-211ENST00000443816 CXCL2P19875 107 aa9.35□□□□□ -0.91
FN1-211ENST00000443816 USMG5Q96IX5 58 aa9.35□□□□□ -0.91
FN1-211ENST00000443816 AICDAQ9GZX7 198 aa9.35□□□□□ -0.91
FN1-211ENST00000443816 SLC25A15Q9Y619 301 aa9.35□□□□□ -0.91
FN1-211ENST00000443816 CACNG7P62955 275 aa9.35□□□□□ -0.91
FN1-211ENST00000443816 OR5AN1Q8NGI8 311 aa9.35□□□□□ -0.91
FN1-211ENST00000443816 RPL24P83731 157 aaKnown RBP9.35□□□□□ -0.91
FN1-211ENST00000443816 SPSB3Q6PJ21 355 aa9.35□□□□□ -0.91
FN1-211ENST00000443816 SLC25A20O43772 301 aa9.35□□□□□ -0.91
FN1-211ENST00000443816 RNF125Q96EQ8 232 aa9.35□□□□□ -0.91
FN1-211ENST00000443816 HSPB9Q9BQS6 159 aa9.35□□□□□ -0.91
FN1-211ENST00000443816 FABP5P3A8MUU1 101 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 CSRP3P50461 194 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 FER1L6-AS1Q8NA97 138 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 TNCP24821 2201 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 CD24P25063 80 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 C2orf68Q2NKX9 166 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 OR10J3Q5JRS4 329 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 NCMAPQ5T1S8 102 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 TMEM200BQ69YZ2 307 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 SOX21Q9Y651 276 aaPredicted RBP9.34□□□□□ -0.91
FN1-211ENST00000443816 PCNX3Q9H6A9 2034 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 TRBV6-7A0A0A0MS04 114 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 C1QTNF4Q9BXJ3 329 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 MUC6Q6W4X9 2439 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 NCOA6Q14686 2063 aaPredicted RBP9.34□□□□□ -0.91
FN1-211ENST00000443816 TCTAP57738 103 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 PKIAP61925 76 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 TMEM144Q7Z5S9 345 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 RNF166Q96A37 237 aaPredicted RBP9.34□□□□□ -0.91
FN1-211ENST00000443816 CGAP01215 116 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 CCL1P22362 96 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 GLMPQ8WWB7 406 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 VENTXO95231 258 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 SRSF7Q16629 238 aaKnown RBP eCLIP9.34□□□□□ -0.911e-6■■■■□ 19.5
FN1-211ENST00000443816 C11orf91Q3C1V1 193 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 KLHL30-AS1Q8NEE0 82 aa9.34□□□□□ -0.91
FN1-211ENST00000443816 RBMY1BA6NDE4 496 aaKnown RBP9.33□□□□□ -0.92
FN1-211ENST00000443816 RBMY1EA6NEQ0 496 aaKnown RBP9.33□□□□□ -0.92
FN1-211ENST00000443816 F12P00748 615 aaPredicted RBP9.33□□□□□ -0.92
FN1-211ENST00000443816 RBMY1DP0C7P1 496 aaKnown RBP9.33□□□□□ -0.92
FN1-211ENST00000443816 RBMY1A1P0DJD3 496 aaKnown RBP9.33□□□□□ -0.92
FN1-211ENST00000443816 RBMY1CP0DJD4 496 aa9.33□□□□□ -0.92
FN1-211ENST00000443816 ERVK11-1P61568 191 aa9.33□□□□□ -0.92
FN1-211ENST00000443816 PRB3Q04118 309 aaPredicted RBP9.33□□□□□ -0.92
FN1-211ENST00000443816 OVOL1O14753 267 aa9.33□□□□□ -0.92
FN1-211ENST00000443816 CBLN2Q8IUK8 224 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms