RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 UFC1Q9Y3C8 167 aa8.27□□□□□ -1.09
HDAC6-211ENST00000443563 NOTCH3Q9UM47 2321 aa8.27□□□□□ -1.09
HDAC6-211ENST00000443563 TRAV30A0A087WSZ9 112 aa8.26□□□□□ -1.09
HDAC6-211ENST00000443563 A8MWP6 167 aa8.26□□□□□ -1.09
HDAC6-211ENST00000443563 WRBO00258 174 aa8.26□□□□□ -1.09
HDAC6-211ENST00000443563 SYNGR2O43760 224 aa8.26□□□□□ -1.09
HDAC6-211ENST00000443563 PRAF2O60831 178 aa8.26□□□□□ -1.09
HDAC6-211ENST00000443563 IGLV1-51P01701 117 aa8.26□□□□□ -1.09
HDAC6-211ENST00000443563 CSN3P07498 182 aa8.26□□□□□ -1.09
HDAC6-211ENST00000443563 SLC25A4P12235 298 aa8.26□□□□□ -1.09
HDAC6-211ENST00000443563 NKX2-1P43699 371 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-211ENST00000443563 KRTAP10-11P60412 298 aa8.26□□□□□ -1.09
HDAC6-211ENST00000443563 C12orf45Q8N5I9 185 aaPredicted RBP8.26□□□□□ -1.09
HDAC6-211ENST00000443563 DYNLRB2Q8TF09 96 aa8.26□□□□□ -1.09
HDAC6-211ENST00000443563 ZC4H2Q9NQZ6 224 aa8.26□□□□□ -1.09
HDAC6-211ENST00000443563 C2orf70A6NJV1 201 aa8.25□□□□□ -1.09
HDAC6-211ENST00000443563 F8W735 103 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-211ENST00000443563 IFNA4P05014 189 aa8.25□□□□□ -1.09
HDAC6-211ENST00000443563 CTSGP08311 255 aa8.25□□□□□ -1.09
HDAC6-211ENST00000443563 ID3Q02535 119 aa8.25□□□□□ -1.09
HDAC6-211ENST00000443563 IAH1Q2TAA2 248 aaPredicted RBP8.25□□□□□ -1.09
HDAC6-211ENST00000443563 LCN12Q6JVE5 192 aa8.25□□□□□ -1.09
HDAC6-211ENST00000443563 IL34Q6ZMJ4 242 aa8.25□□□□□ -1.09
HDAC6-211ENST00000443563 NRARPQ7Z6K4 114 aa8.25□□□□□ -1.09
HDAC6-211ENST00000443563 UXS1Q8NBZ7 420 aa8.25□□□□□ -1.09
HDAC6-211ENST00000443563 OR4D5Q8NGN0 318 aa8.25□□□□□ -1.09
HDAC6-211ENST00000443563 OR4X1Q8NH49 305 aa8.25□□□□□ -1.09
HDAC6-211ENST00000443563 MRAPQ8TCY5 172 aa8.25□□□□□ -1.09
HDAC6-211ENST00000443563 SEC22CQ9BRL7 303 aa8.25□□□□□ -1.09
HDAC6-211ENST00000443563 CHRDL1Q9BU40 450 aa8.25□□□□□ -1.09
HDAC6-211ENST00000443563 TECRQ9NZ01 308 aaKnown RBP8.25□□□□□ -1.09
HDAC6-211ENST00000443563 C15orf62A8K5M9 175 aa8.24□□□□□ -1.09
HDAC6-211ENST00000443563 SNRPGP15A8MWD9 76 aa8.24□□□□□ -1.09
HDAC6-211ENST00000443563 INMT-MINDY4F8WBC2 141 aa8.24□□□□□ -1.09
HDAC6-211ENST00000443563 K7EMT4 169 aa8.24□□□□□ -1.09
HDAC6-211ENST00000443563 CLN5O75503 358 aa8.24□□□□□ -1.09
HDAC6-211ENST00000443563 TMEM50AO95807 157 aa8.24□□□□□ -1.09
HDAC6-211ENST00000443563 IGHV3-48P01763 117 aa8.24□□□□□ -1.09
HDAC6-211ENST00000443563 PRB2P02812 416 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-211ENST00000443563 IAPPP10997 89 aa8.24□□□□□ -1.09
HDAC6-211ENST00000443563 FOLR2P14207 255 aa8.24□□□□□ -1.09
HDAC6-211ENST00000443563 CBLN1P23435 193 aa8.24□□□□□ -1.09
HDAC6-211ENST00000443563 GPX4P36969 197 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-211ENST00000443563 ZNF600Q6ZNG1 722 aa8.24□□□□□ -1.09
HDAC6-211ENST00000443563 ZBTB8BQ8NAP8 495 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-211ENST00000443563 TMEM190Q8WZ59 177 aa8.24□□□□□ -1.09
HDAC6-211ENST00000443563 MARVELD1Q9BSK0 173 aa8.24□□□□□ -1.09
HDAC6-211ENST00000443563 MAGT1Q9H0U3 335 aa8.24□□□□□ -1.09
HDAC6-211ENST00000443563 FNDC4Q9H6D8 234 aaPredicted RBP8.24□□□□□ -1.09
HDAC6-211ENST00000443563 DAZ1Q9NQZ3 744 aaKnown RBP8.24□□□□□ -1.09
HDAC6-211ENST00000443563 MRPL27Q9P0M9 148 aaKnown RBP8.24□□□□□ -1.09
HDAC6-211ENST00000443563 PRKDCP78527 4128 aaKnown RBP8.24□□□□□ -1.09
HDAC6-211ENST00000443563 IGHV3-35A0A0C4DH35 117 aa8.23□□□□□ -1.09
HDAC6-211ENST00000443563 TMEM213A2RRL7 107 aa8.23□□□□□ -1.09
HDAC6-211ENST00000443563 C5orf51A6NDU8 294 aa8.23□□□□□ -1.09
HDAC6-211ENST00000443563 MPTX1A8MV57 137 aa8.23□□□□□ -1.09
HDAC6-211ENST00000443563 FAM25EA8MYX2 175 aa8.23□□□□□ -1.09
HDAC6-211ENST00000443563 YIF1AO95070 293 aa8.23□□□□□ -1.09
HDAC6-211ENST00000443563 GP9P14770 177 aa8.23□□□□□ -1.09
HDAC6-211ENST00000443563 ADMP35318 185 aa8.23□□□□□ -1.09
HDAC6-211ENST00000443563 CD69Q07108 199 aa8.23□□□□□ -1.09
HDAC6-211ENST00000443563 GSG1LQ6UXU4 331 aa8.23□□□□□ -1.09
HDAC6-211ENST00000443563 TMEM116Q8NCL8 245 aa8.23□□□□□ -1.09
HDAC6-211ENST00000443563 CACNG8Q8WXS5 425 aa8.23□□□□□ -1.09
HDAC6-211ENST00000443563 OR10C1Q96KK4 312 aa8.23□□□□□ -1.09
HDAC6-211ENST00000443563 RAB40CQ96S21 281 aa8.23□□□□□ -1.09
HDAC6-211ENST00000443563 GINS3Q9BRX5 216 aa8.23□□□□□ -1.09
HDAC6-211ENST00000443563 GSKIPQ9P0R6 139 aa8.23□□□□□ -1.09
HDAC6-211ENST00000443563 PAIP2BQ9ULR5 123 aaKnown RBP8.23□□□□□ -1.09
HDAC6-211ENST00000443563 STRAPQ9Y3F4 350 aaKnown RBP8.23□□□□□ -1.09
HDAC6-211ENST00000443563 WI2-2373I1.2A0A1W2PRP0 233 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 SSSCA1O60232 199 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 SCGB1D2O95969 90 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 PTTG1O95997 202 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 C8orf88P0DMB2 117 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 SPNP16150 400 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 BMI1P35226 326 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 TAS2R30P59541 319 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 POLR2GP62487 172 aaKnown RBP eCLIP8.22□□□□□ -1.09
HDAC6-211ENST00000443563 DEFB114Q30KQ6 69 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 TM4SF20Q53R12 229 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 SPANXN5Q5MJ07 72 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 PRSS54Q6PEW0 395 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 UNQ9165/PRO28630Q6UXU0 137 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 SLC16A13Q7RTY0 426 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 OR1S2Q8NGQ3 325 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 TMEM170AQ8WVE7 144 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 SLC35E1Q96K37 410 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 SMIM8Q96KF7 97 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 C2orf50Q96LR7 162 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 PRR25Q96S07 402 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 C20orf24Q9BUV8 137 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 PSENENQ9NZ42 101 aa8.22□□□□□ -1.09
HDAC6-211ENST00000443563 TRAV14DV4A0A0A6YYC5 116 aa8.21□□□□□ -1.1
HDAC6-211ENST00000443563 TRAV25A0A0B4J276 109 aa8.21□□□□□ -1.1
HDAC6-211ENST00000443563 K7EIL1 84 aa8.21□□□□□ -1.1
HDAC6-211ENST00000443563 CCSO14618 274 aa8.21□□□□□ -1.1
HDAC6-211ENST00000443563 FABP1P07148 127 aa8.21□□□□□ -1.1
HDAC6-211ENST00000443563 OR10J1P30954 320 aa8.21□□□□□ -1.1
HDAC6-211ENST00000443563 RND2P52198 227 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms