RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 FAM25EA8MYX2 175 aa9.41□□□□□ -0.9
USP1-203ENST00000442679 WRBO00258 174 aa9.41□□□□□ -0.9
USP1-203ENST00000442679 CCSO14618 274 aa9.41□□□□□ -0.9
USP1-203ENST00000442679 WIPF1O43516 503 aa9.41□□□□□ -0.9
USP1-203ENST00000442679 PRAF2O60831 178 aa9.41□□□□□ -0.9
USP1-203ENST00000442679 CTSGP08311 255 aa9.41□□□□□ -0.9
USP1-203ENST00000442679 NPBWR1P48145 328 aa9.41□□□□□ -0.9
USP1-203ENST00000442679 ATP5IP56385 69 aaPredicted RBP9.41□□□□□ -0.9
USP1-203ENST00000442679 KRTAP10-11P60412 298 aa9.41□□□□□ -0.9
USP1-203ENST00000442679 ID3Q02535 119 aa9.41□□□□□ -0.9
USP1-203ENST00000442679 IL34Q6ZMJ4 242 aa9.41□□□□□ -0.9
USP1-203ENST00000442679 ZBTB8BQ8NAP8 495 aaPredicted RBP9.41□□□□□ -0.9
USP1-203ENST00000442679 RNASEH2CQ8TDP1 164 aaKnown RBP9.41□□□□□ -0.9
USP1-203ENST00000442679 CIB3Q96Q77 187 aaPredicted RBP9.41□□□□□ -0.9
USP1-203ENST00000442679 FNDC4Q9H6D8 234 aaPredicted RBP9.41□□□□□ -0.9
USP1-203ENST00000442679 PEMTQ9UBM1 199 aa9.41□□□□□ -0.9
USP1-203ENST00000442679 ZMAT5Q9UDW3 170 aaKnown RBP9.41□□□□□ -0.9
USP1-203ENST00000442679 RPS10-NUDT3A0A1W2PQS6 291 aa9.4□□□□□ -0.9
USP1-203ENST00000442679 C5orf51A6NDU8 294 aa9.4□□□□□ -0.9
USP1-203ENST00000442679 SNRPGP15A8MWD9 76 aa9.4□□□□□ -0.9
USP1-203ENST00000442679 LGALS9O00182 355 aa9.4□□□□□ -0.9
USP1-203ENST00000442679 NUPL2O15504 423 aaKnown RBP9.4□□□□□ -0.9
USP1-203ENST00000442679 GNG7O60262 68 aa9.4□□□□□ -0.9
USP1-203ENST00000442679 PRB2P02812 416 aaPredicted RBP9.4□□□□□ -0.9
USP1-203ENST00000442679 IFNA4P05014 189 aa9.4□□□□□ -0.9
USP1-203ENST00000442679 CSN3P07498 182 aa9.4□□□□□ -0.9
USP1-203ENST00000442679 ADMP35318 185 aa9.4□□□□□ -0.9
USP1-203ENST00000442679 NKX2-1P43699 371 aaPredicted RBP9.4□□□□□ -0.9
USP1-203ENST00000442679 POLR2GP62487 172 aaKnown RBP eCLIP9.4□□□□□ -0.9
USP1-203ENST00000442679 EGFEM1PQ0D2K5 195 aa9.4□□□□□ -0.9
USP1-203ENST00000442679 REC114Q7Z4M0 266 aa9.4□□□□□ -0.9
USP1-203ENST00000442679 LY86O95711 162 aa9.39□□□□□ -0.91
USP1-203ENST00000442679 TMEM50AO95807 157 aa9.39□□□□□ -0.91
USP1-203ENST00000442679 SCGB1D2O95969 90 aa9.39□□□□□ -0.91
USP1-203ENST00000442679 PTTG1O95997 202 aa9.39□□□□□ -0.91
USP1-203ENST00000442679 RAB11AP62491 216 aa9.39□□□□□ -0.91
USP1-203ENST00000442679 RPP30P78346 268 aaKnown RBP9.39□□□□□ -0.91
USP1-203ENST00000442679 ETFRF1Q6IPR1 90 aa9.39□□□□□ -0.91
USP1-203ENST00000442679 UNQ9165/PRO28630Q6UXU0 137 aa9.39□□□□□ -0.91
USP1-203ENST00000442679 GSG1LQ6UXU4 331 aa9.39□□□□□ -0.91
USP1-203ENST00000442679 OR4X1Q8NH49 305 aa9.39□□□□□ -0.91
USP1-203ENST00000442679 C2orf50Q96LR7 162 aa9.39□□□□□ -0.91
USP1-203ENST00000442679 ZNF436Q9C0F3 470 aaPredicted RBP9.39□□□□□ -0.91
USP1-203ENST00000442679 PALMDQ9NP74 551 aa9.39□□□□□ -0.91
USP1-203ENST00000442679 MRPL36Q9P0J6 103 aaKnown RBP9.39□□□□□ -0.91
USP1-203ENST00000442679 PAIP2BQ9ULR5 123 aaKnown RBP9.39□□□□□ -0.91
USP1-203ENST00000442679 NOTCH3Q9UM47 2321 aa9.39□□□□□ -0.91
USP1-203ENST00000442679 C2orf70A6NJV1 201 aa9.38□□□□□ -0.91
USP1-203ENST00000442679 C15orf62A8K5M9 175 aa9.38□□□□□ -0.91
USP1-203ENST00000442679 NDUFA4O00483 81 aa9.38□□□□□ -0.91
USP1-203ENST00000442679 SSSCA1O60232 199 aa9.38□□□□□ -0.91
USP1-203ENST00000442679 CLN5O75503 358 aa9.38□□□□□ -0.91
USP1-203ENST00000442679 MBPP02686 304 aaPredicted RBP9.38□□□□□ -0.91
USP1-203ENST00000442679 SLC25A4P12235 298 aa9.38□□□□□ -0.91
USP1-203ENST00000442679 RELQ04864 619 aaPredicted RBP9.38□□□□□ -0.91
USP1-203ENST00000442679 SPANXN5Q5MJ07 72 aa9.38□□□□□ -0.91
USP1-203ENST00000442679 PRSS54Q6PEW0 395 aa9.38□□□□□ -0.91
USP1-203ENST00000442679 HAPLN4Q86UW8 402 aa9.38□□□□□ -0.91
USP1-203ENST00000442679 SIGLEC8Q9NYZ4 499 aa9.38□□□□□ -0.91
USP1-203ENST00000442679 UFC1Q9Y3C8 167 aa9.38□□□□□ -0.91
USP1-203ENST00000442679 H3BP45 60 aa9.37□□□□□ -0.91
USP1-203ENST00000442679 YIF1AO95070 293 aa9.37□□□□□ -0.91
USP1-203ENST00000442679 IGLV1-51P01701 117 aa9.37□□□□□ -0.91
USP1-203ENST00000442679 FOLR2P14207 255 aa9.37□□□□□ -0.91
USP1-203ENST00000442679 GPX4P36969 197 aaPredicted RBP9.37□□□□□ -0.91
USP1-203ENST00000442679 CD69Q07108 199 aa9.37□□□□□ -0.91
USP1-203ENST00000442679 DCTN2Q13561 401 aaKnown RBP9.37□□□□□ -0.91
USP1-203ENST00000442679 TM4SF20Q53R12 229 aa9.37□□□□□ -0.91
USP1-203ENST00000442679 ADAMTSL5Q6ZMM2 481 aa9.37□□□□□ -0.91
USP1-203ENST00000442679 TMEM190Q8WZ59 177 aa9.37□□□□□ -0.91
USP1-203ENST00000442679 ACY3Q96HD9 319 aa9.37□□□□□ -0.91
USP1-203ENST00000442679 SMIM8Q96KF7 97 aa9.37□□□□□ -0.91
USP1-203ENST00000442679 RAB40CQ96S21 281 aa9.37□□□□□ -0.91
USP1-203ENST00000442679 C20orf24Q9BUV8 137 aa9.37□□□□□ -0.91
USP1-203ENST00000442679 AURKAIP1Q9NWT8 199 aaPredicted RBP9.37□□□□□ -0.91
USP1-203ENST00000442679 PSENENQ9NZ42 101 aa9.37□□□□□ -0.91
USP1-203ENST00000442679 STRAPQ9Y3F4 350 aaKnown RBP9.37□□□□□ -0.91
USP1-203ENST00000442679 IGHV3OR16-8A0A075B7F1 116 aa9.36□□□□□ -0.91
USP1-203ENST00000442679 TRAV30A0A087WSZ9 112 aa9.36□□□□□ -0.91
USP1-203ENST00000442679 TMEM213A2RRL7 107 aa9.36□□□□□ -0.91
USP1-203ENST00000442679 A8MWP6 167 aa9.36□□□□□ -0.91
USP1-203ENST00000442679 GOSR2O14653 212 aa9.36□□□□□ -0.91
USP1-203ENST00000442679 SSNA1O43805 119 aa9.36□□□□□ -0.91
USP1-203ENST00000442679 SCGB2A1O75556 95 aa9.36□□□□□ -0.91
USP1-203ENST00000442679 SIX6O95475 246 aa9.36□□□□□ -0.91
USP1-203ENST00000442679 EDN2P20800 178 aa9.36□□□□□ -0.91
USP1-203ENST00000442679 CBLN1P23435 193 aa9.36□□□□□ -0.91
USP1-203ENST00000442679 RND2P52198 227 aa9.36□□□□□ -0.91
USP1-203ENST00000442679 ELLP55199 621 aaPredicted RBP9.36□□□□□ -0.91
USP1-203ENST00000442679 PAX9P55771 341 aa9.36□□□□□ -0.91
USP1-203ENST00000442679 SLC16A13Q7RTY0 426 aa9.36□□□□□ -0.91
USP1-203ENST00000442679 TMEM116Q8NCL8 245 aa9.36□□□□□ -0.91
USP1-203ENST00000442679 NPIPB3Q92617 1050 aa9.36□□□□□ -0.91
USP1-203ENST00000442679 WI2-2373I1.2A0A1W2PRP0 233 aa9.35□□□□□ -0.91
USP1-203ENST00000442679 ZNF207O43670 478 aaKnown RBP9.35□□□□□ -0.91
USP1-203ENST00000442679 OR10J1P30954 320 aa9.35□□□□□ -0.91
USP1-203ENST00000442679 TAS2R30P59541 319 aa9.35□□□□□ -0.91
USP1-203ENST00000442679 TIGITQ495A1 244 aa9.35□□□□□ -0.91
USP1-203ENST00000442679 TOMM20LQ6UXN7 152 aa9.35□□□□□ -0.91
USP1-203ENST00000442679 ZNF600Q6ZNG1 722 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms