RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 UBE2L3P68036 154 aaKnown RBP13.39□□□□□ -0.27
SEMA3B-207ENST00000441915 BATFQ16520 125 aa13.39□□□□□ -0.27
SEMA3B-207ENST00000441915 TMEM108Q6UXF1 575 aa13.39□□□□□ -0.27
SEMA3B-207ENST00000441915 OR5AN1Q8NGI8 311 aa13.39□□□□□ -0.27
SEMA3B-207ENST00000441915 OR2T6Q8NHC8 308 aa13.39□□□□□ -0.27
SEMA3B-207ENST00000441915 ZNF714Q96N38 554 aa13.39□□□□□ -0.27
SEMA3B-207ENST00000441915 C20orf144Q9BQM9 153 aa13.39□□□□□ -0.27
SEMA3B-207ENST00000441915 IGLV2-8P01709 118 aa13.39□□□□□ -0.27
SEMA3B-207ENST00000441915 CEACAM8P31997 349 aaPredicted RBP13.39□□□□□ -0.27
SEMA3B-207ENST00000441915 SLC35B1P78383 322 aa13.39□□□□□ -0.27
SEMA3B-207ENST00000441915 SERTAD4Q9NUC0 356 aa13.39□□□□□ -0.27
SEMA3B-207ENST00000441915 A0A1W2PN81 502 aa13.38□□□□□ -0.27
SEMA3B-207ENST00000441915 CCL3L1P16619 93 aa13.38□□□□□ -0.27
SEMA3B-207ENST00000441915 TCL1AP56279 114 aa13.38□□□□□ -0.27
SEMA3B-207ENST00000441915 TMEM177Q53S58 311 aa13.38□□□□□ -0.27
SEMA3B-207ENST00000441915 TEX43Q6ZNM6 134 aa13.38□□□□□ -0.27
SEMA3B-207ENST00000441915 SIGLECL1Q8N7X8 197 aa13.38□□□□□ -0.27
SEMA3B-207ENST00000441915 RNASE8Q8TDE3 154 aaKnown RBP13.38□□□□□ -0.27
SEMA3B-207ENST00000441915 IGF2BP2-AS1Q96M15 143 aa13.38□□□□□ -0.27
SEMA3B-207ENST00000441915 GNB4Q9HAV0 340 aa13.38□□□□□ -0.27
SEMA3B-207ENST00000441915 PSMB11A5LHX3 300 aa13.38□□□□□ -0.27
SEMA3B-207ENST00000441915 INS-IGF2F8WCM5 200 aa13.38□□□□□ -0.27
SEMA3B-207ENST00000441915 REG1BP48304 166 aa13.38□□□□□ -0.27
SEMA3B-207ENST00000441915 COL5A1-AS1Q5SY13 56 aa13.38□□□□□ -0.27
SEMA3B-207ENST00000441915 TMEM136Q6ZRR5 245 aa13.38□□□□□ -0.27
SEMA3B-207ENST00000441915 C11orf42Q8N5U0 333 aa13.38□□□□□ -0.27
SEMA3B-207ENST00000441915 OR4C13Q8NGP0 309 aa13.38□□□□□ -0.27
SEMA3B-207ENST00000441915 VSTM2AQ8TAG5 236 aa13.38□□□□□ -0.27
SEMA3B-207ENST00000441915 FAM167A-AS1Q96KT0 104 aa13.38□□□□□ -0.27
SEMA3B-207ENST00000441915 SLC25A2Q9BXI2 301 aa13.38□□□□□ -0.27
SEMA3B-207ENST00000441915 TRAV5A0A0B4J249 113 aa13.37□□□□□ -0.27
SEMA3B-207ENST00000441915 E7EUB6 86 aa13.37□□□□□ -0.27
SEMA3B-207ENST00000441915 TMEM183BQ1AE95 376 aa13.37□□□□□ -0.27
SEMA3B-207ENST00000441915 OR10J3Q5JRS4 329 aa13.37□□□□□ -0.27
SEMA3B-207ENST00000441915 VN1R17PQ8TDU5 208 aa13.37□□□□□ -0.27
SEMA3B-207ENST00000441915 CDKN1AP38936 164 aa13.37□□□□□ -0.27
SEMA3B-207ENST00000441915 MORN5Q5VZ52 161 aa13.37□□□□□ -0.27
SEMA3B-207ENST00000441915 OR10X1Q8NGY0 326 aa13.37□□□□□ -0.27
SEMA3B-207ENST00000441915 CDC42EP3Q9UKI2 254 aa13.37□□□□□ -0.27
SEMA3B-207ENST00000441915 SMIM27A0A1W2PRY6 76 aa13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 C17orf100A8MU93 164 aa13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 COX7A2P2O60397 106 aa13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 HLA-DQA1P01909 254 aa13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 DMXL1Q9Y485 3027 aa13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 MAP1BP46821 2468 aaKnown RBP13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 AMY1AP04745 511 aa13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 GPX1P07203 203 aa13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 TFPI2P48307 235 aa13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 SUB1P53999 127 aaKnown RBP eCLIP13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 KIAA1644Q3SXP7 199 aa13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 TDRG1Q3Y452 100 aa13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 TMEM200BQ69YZ2 307 aa13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 MRPL54Q6P161 138 aaKnown RBP13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 ZCCHC24Q8N2G6 241 aaKnown RBP13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 OR1L4Q8NGR5 311 aa13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 OR4A5Q8NH83 315 aa13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 TMEM167AQ8TBQ9 72 aa13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 FAM57AQ8TBR7 257 aa13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 CEP250Q9BV73 2442 aa13.36□□□□□ -0.27
SEMA3B-207ENST00000441915 PDPNQ86YL7 162 aa13.35□□□□□ -0.27
SEMA3B-207ENST00000441915 FAM103A1Q9BTL3 118 aaKnown RBP13.35□□□□□ -0.27
SEMA3B-207ENST00000441915 VAMP8Q9BV40 100 aa13.35□□□□□ -0.27
SEMA3B-207ENST00000441915 ZNF355PQ9NSJ1 428 aa13.35□□□□□ -0.27
SEMA3B-207ENST00000441915 ZNF586Q9NXT0 402 aa13.35□□□□□ -0.27
SEMA3B-207ENST00000441915 AMMECR1Q9Y4X0 333 aaPredicted RBP13.35□□□□□ -0.27
SEMA3B-207ENST00000441915 WT1-ASQ06250 92 aa13.35□□□□□ -0.27
SEMA3B-207ENST00000441915 C10orf113Q5VZT2 155 aa13.35□□□□□ -0.27
SEMA3B-207ENST00000441915 NHLRC2Q8NBF2 726 aa13.35□□□□□ -0.27
SEMA3B-207ENST00000441915 H1FXQ92522 213 aaKnown RBP13.35□□□□□ -0.27
SEMA3B-207ENST00000441915 PAXXQ9BUH6 204 aa13.35□□□□□ -0.27
SEMA3B-207ENST00000441915 ZNF430Q9H8G1 570 aaPredicted RBP13.35□□□□□ -0.27
SEMA3B-207ENST00000441915 PAM16Q9Y3D7 125 aa13.35□□□□□ -0.27
SEMA3B-207ENST00000441915 PPIAL4EA0A075B759 164 aa13.34□□□□□ -0.27
SEMA3B-207ENST00000441915 PPIAL4DF5H284 164 aa13.34□□□□□ -0.27
SEMA3B-207ENST00000441915 ZNF253O75346 499 aa13.34□□□□□ -0.27
SEMA3B-207ENST00000441915 PPIAL4FP0DN26 164 aa13.34□□□□□ -0.27
SEMA3B-207ENST00000441915 ADIPOQQ15848 244 aa13.34□□□□□ -0.27
SEMA3B-207ENST00000441915 NPIPB3Q92617 1050 aa13.34□□□□□ -0.27
SEMA3B-207ENST00000441915 TMEM186Q96B77 213 aa13.34□□□□□ -0.27
SEMA3B-207ENST00000441915 FNDC4Q9H6D8 234 aaPredicted RBP13.34□□□□□ -0.27
SEMA3B-207ENST00000441915 SAP30LQ9HAJ7 183 aa13.34□□□□□ -0.27
SEMA3B-207ENST00000441915 PPIAL4AQ9Y536 164 aa13.34□□□□□ -0.27
SEMA3B-207ENST00000441915 TCRBV4S1A1TA0A5B7 111 aa13.34□□□□□ -0.27
SEMA3B-207ENST00000441915 PYYP10082 97 aa13.34□□□□□ -0.27
SEMA3B-207ENST00000441915 CDKN1BP46527 198 aa13.34□□□□□ -0.27
SEMA3B-207ENST00000441915 SSBP2P81877 361 aaPredicted RBP13.34□□□□□ -0.27
SEMA3B-207ENST00000441915 RBMXL3Q8N7X1 1067 aaKnown RBP13.34□□□□□ -0.27
SEMA3B-207ENST00000441915 LINC00479Q96M42 142 aa13.34□□□□□ -0.27
SEMA3B-207ENST00000441915 TBL2Q9Y4P3 447 aaKnown RBP13.34□□□□□ -0.27
SEMA3B-207ENST00000441915 MGAQ8IWI9 3026 aa13.34□□□□□ -0.27
SEMA3B-207ENST00000441915 C20orf202A1L168 122 aa13.33□□□□□ -0.27
SEMA3B-207ENST00000441915 IZUMO1RA6ND01 250 aa13.33□□□□□ -0.27
SEMA3B-207ENST00000441915 CA1P00915 261 aaPredicted RBP13.33□□□□□ -0.27
SEMA3B-207ENST00000441915 SRIP30626 198 aa13.33□□□□□ -0.27
SEMA3B-207ENST00000441915 AMTP48728 403 aa13.33□□□□□ -0.27
SEMA3B-207ENST00000441915 LEMD1Q68G75 181 aa13.33□□□□□ -0.27
SEMA3B-207ENST00000441915 FAM71F2Q6NXP2 309 aa13.33□□□□□ -0.27
SEMA3B-207ENST00000441915 WFDC8Q8IUA0 241 aa13.33□□□□□ -0.27
SEMA3B-207ENST00000441915 KCNS1Q96KK3 526 aa13.33□□□□□ -0.27
SEMA3B-207ENST00000441915 ZNF331Q9NQX6 463 aaPredicted RBP13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms