RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 MRPS21P82921 87 aaKnown RBP8.46□□□□□ -1.06
SYNE2-206ENST00000441438 ARFRP1Q13795 201 aa8.46□□□□□ -1.06
SYNE2-206ENST00000441438 RTN4IP1Q8WWV3 396 aaPredicted RBP8.46□□□□□ -1.06
SYNE2-206ENST00000441438 ARHGEF17Q96PE2 2063 aaPredicted RBP8.46□□□□□ -1.06
SYNE2-206ENST00000441438 SSBP3Q9BWW4 388 aaPredicted RBP8.46□□□□□ -1.06
SYNE2-206ENST00000441438 MUC21A0A0G2JKD1 596 aa8.45□□□□□ -1.06
SYNE2-206ENST00000441438 OR4C45A6NMZ5 311 aa8.45□□□□□ -1.06
SYNE2-206ENST00000441438 GABARAPH6UMI1 98 aa8.45□□□□□ -1.06
SYNE2-206ENST00000441438 CREBL2O60519 120 aaPredicted RBP8.45□□□□□ -1.06
SYNE2-206ENST00000441438 PPP1CCP36873 323 aaKnown RBP8.45□□□□□ -1.06
SYNE2-206ENST00000441438 PAPPA-AS1Q5QFB9 102 aa8.45□□□□□ -1.06
SYNE2-206ENST00000441438 METTL27Q8N6F8 245 aaPredicted RBP8.45□□□□□ -1.06
SYNE2-206ENST00000441438 NT5CQ8TCD5 201 aa8.45□□□□□ -1.06
SYNE2-206ENST00000441438 BCL2L10Q9HD36 194 aa8.45□□□□□ -1.06
SYNE2-206ENST00000441438 MDC1Q14676 2089 aaKnown RBP8.45□□□□□ -1.06
SYNE2-206ENST00000441438 BCL2P10415 239 aa8.45□□□□□ -1.06
SYNE2-206ENST00000441438 NMUP48645 174 aa8.45□□□□□ -1.06
SYNE2-206ENST00000441438 HES1Q14469 280 aa8.45□□□□□ -1.06
SYNE2-206ENST00000441438 ZNF791Q3KP31 576 aaPredicted RBP8.45□□□□□ -1.06
SYNE2-206ENST00000441438 ZNF793Q6ZN11 406 aa8.45□□□□□ -1.06
SYNE2-206ENST00000441438 LRP11Q86VZ4 500 aa8.45□□□□□ -1.06
SYNE2-206ENST00000441438 OR1J4Q8NGS1 313 aa8.45□□□□□ -1.06
SYNE2-206ENST00000441438 RBM12B-AS1Q9P1G2 102 aa8.45□□□□□ -1.06
SYNE2-206ENST00000441438 HEBP2Q9Y5Z4 205 aa8.45□□□□□ -1.06
SYNE2-206ENST00000441438 HMGN4O00479 90 aa8.45□□□□□ -1.06
SYNE2-206ENST00000441438 SFT2D2O95562 160 aa8.45□□□□□ -1.06
SYNE2-206ENST00000441438 VDAC2P45880 294 aaPredicted RBP8.45□□□□□ -1.06
SYNE2-206ENST00000441438 LOXL1Q08397 574 aaPredicted RBP8.45□□□□□ -1.06
SYNE2-206ENST00000441438 Q75L30 129 aa8.45□□□□□ -1.06
SYNE2-206ENST00000441438 OR4C16Q8NGL9 310 aa8.45□□□□□ -1.06
SYNE2-206ENST00000441438 SLC25A44Q96H78 314 aaPredicted RBP8.45□□□□□ -1.06
SYNE2-206ENST00000441438 TDRD6O60522 2096 aaKnown RBP8.45□□□□□ -1.06
SYNE2-206ENST00000441438 CYB5AP00167 134 aa8.44□□□□□ -1.06
SYNE2-206ENST00000441438 TRGC2P03986 189 aa8.44□□□□□ -1.06
SYNE2-206ENST00000441438 ZNF93P35789 620 aaPredicted RBP8.44□□□□□ -1.06
SYNE2-206ENST00000441438 SUMO2P61956 95 aaKnown RBP8.44□□□□□ -1.06
SYNE2-206ENST00000441438 UBE2NLQ5JXB2 153 aa8.44□□□□□ -1.06
SYNE2-206ENST00000441438 ANKRD29Q8N6D5 301 aa8.44□□□□□ -1.06
SYNE2-206ENST00000441438 FGF14Q92915 247 aa8.44□□□□□ -1.06
SYNE2-206ENST00000441438 TMEM9BQ9NQ34 198 aa8.44□□□□□ -1.06
SYNE2-206ENST00000441438 TAAR2Q9P1P5 351 aa8.44□□□□□ -1.06
SYNE2-206ENST00000441438 PLXNA2O75051 1894 aa8.44□□□□□ -1.06
SYNE2-206ENST00000441438 TRBV20-1A0A075B6N2 111 aa8.44□□□□□ -1.06
SYNE2-206ENST00000441438 MEIS3P1A6NDR6 274 aa8.44□□□□□ -1.06
SYNE2-206ENST00000441438 HAX1O00165 279 aa8.44□□□□□ -1.06
SYNE2-206ENST00000441438 GFRA3O60609 400 aa8.44□□□□□ -1.06
SYNE2-206ENST00000441438 DNM1P46Q6ZS02 220 aa8.44□□□□□ -1.06
SYNE2-206ENST00000441438 SSX8Q7RTT4 187 aa8.44□□□□□ -1.06
SYNE2-206ENST00000441438 PIP4P2Q8N4L2 257 aa8.44□□□□□ -1.06
SYNE2-206ENST00000441438 MUC3AQ02505 3323 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 ATP1B1P05026 303 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 SFTA3P0C7M3 94 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 CTSEP14091 401 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 Q6ZRU5 148 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 ZFP62Q8NB50 900 aaPredicted RBP8.43□□□□□ -1.06
SYNE2-206ENST00000441438 LMX1AQ8TE12 382 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 IGF2BP2-AS1Q96M15 143 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 AK3Q9UIJ7 227 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 TEX50A0A1B0GTY4 177 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 NDUFB6O95139 128 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 MRPL54Q6P161 138 aaKnown RBP8.43□□□□□ -1.06
SYNE2-206ENST00000441438 SHISA6Q6ZSJ9 500 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 CABIN1Q9Y6J0 2220 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 PLAC8L1A1L4L8 177 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 PAX4O43316 350 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 AVPP01185 164 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 OPRK1P41145 380 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 FOXA3P55318 350 aaPredicted RBP8.43□□□□□ -1.06
SYNE2-206ENST00000441438 B3GALT5-AS1P59052 145 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 CEACAM19Q7Z692 300 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 OR4K13Q8NH42 304 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 MUCL1Q96DR8 90 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 DPH3Q96FX2 82 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 TMEM106BQ9NUM4 274 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 ZNF257Q9Y2Q1 563 aa8.43□□□□□ -1.06
SYNE2-206ENST00000441438 TRBV5-7A0A0A0MS05 114 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 A6NDN8 102 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 APOHP02749 345 aaPredicted RBP8.42□□□□□ -1.06
SYNE2-206ENST00000441438 ATOH7Q8N100 152 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 SLC25A38Q96DW6 304 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 FAM19A4Q96LR4 140 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 TMEM204Q9BSN7 226 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 A0A1B0GXF2 115 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 A6NIN4 97 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 KNCNA6PVL3 124 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 PTGDSP41222 190 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 SRSF3P84103 164 aaKnown RBP8.42□□□□□ -1.06
SYNE2-206ENST00000441438 ECSCRQ19T08 205 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 ZNF718Q3SXZ3 478 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 FAM78AQ5JUQ0 283 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 DGAT2L6Q6ZPD8 337 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 C3orf22Q8N5N4 141 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 OR8S1Q8NH09 359 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 OR1L3Q8NH93 324 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 GPHA2Q96T91 129 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 C21orf62Q9NYP8 219 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 DMDP11532 3685 aa8.42□□□□□ -1.06
SYNE2-206ENST00000441438 A0A0A6YYD4 124 aa8.41□□□□□ -1.06
SYNE2-206ENST00000441438 RND2P52198 227 aa8.41□□□□□ -1.06
SYNE2-206ENST00000441438 ZNF85Q03923 595 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms