RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 CLN5O75503 358 aa8.5□□□□□ -1.05
UBE2D4-204ENST00000440899 SCGB2A1O75556 95 aa8.5□□□□□ -1.05
UBE2D4-204ENST00000440899 B3GALNT1O75752 331 aa8.5□□□□□ -1.05
UBE2D4-204ENST00000440899 ETV6P41212 452 aa8.5□□□□□ -1.05
UBE2D4-204ENST00000440899 RPL5P46777 297 aaKnown RBP8.5□□□□□ -1.05
UBE2D4-204ENST00000440899 HOXA1P49639 335 aaPredicted RBP8.5□□□□□ -1.05
UBE2D4-204ENST00000440899 TRIM16LQ309B1 348 aa8.5□□□□□ -1.05
UBE2D4-204ENST00000440899 RNASE12Q5GAN4 147 aaKnown RBP8.5□□□□□ -1.05
UBE2D4-204ENST00000440899 LEMD1Q68G75 181 aa8.5□□□□□ -1.05
UBE2D4-204ENST00000440899 STHQ8IWL8 128 aa8.5□□□□□ -1.05
UBE2D4-204ENST00000440899 RPP25LQ8N5L8 163 aaKnown RBP8.5□□□□□ -1.05
UBE2D4-204ENST00000440899 CCDC71LQ8N9Z2 235 aa8.5□□□□□ -1.05
UBE2D4-204ENST00000440899 OR4X1Q8NH49 305 aa8.5□□□□□ -1.05
UBE2D4-204ENST00000440899 TERB2Q8NHR7 220 aa8.5□□□□□ -1.05
UBE2D4-204ENST00000440899 AP3S1Q92572 193 aa8.5□□□□□ -1.05
UBE2D4-204ENST00000440899 KRTAP17-1Q9BYP8 105 aa8.5□□□□□ -1.05
UBE2D4-204ENST00000440899 FBXL17Q9UF56 701 aa8.5□□□□□ -1.05
UBE2D4-204ENST00000440899 RABAC1Q9UI14 185 aa8.5□□□□□ -1.05
UBE2D4-204ENST00000440899 UCP1P25874 307 aa8.49□□□□□ -1.05
UBE2D4-204ENST00000440899 CRYBB3P26998 211 aa8.49□□□□□ -1.05
UBE2D4-204ENST00000440899 OPRK1P41145 380 aa8.49□□□□□ -1.05
UBE2D4-204ENST00000440899 SP6Q3SY56 376 aa8.49□□□□□ -1.05
UBE2D4-204ENST00000440899 TMEM41BQ5BJD5 291 aa8.49□□□□□ -1.05
UBE2D4-204ENST00000440899 TMEM229BQ8NBD8 167 aa8.49□□□□□ -1.05
UBE2D4-204ENST00000440899 C15orf40Q8WUR7 153 aa8.49□□□□□ -1.05
UBE2D4-204ENST00000440899 TMEM230Q96A57 120 aa8.49□□□□□ -1.05
UBE2D4-204ENST00000440899 GRAMD2BQ96HH9 432 aa8.49□□□□□ -1.05
UBE2D4-204ENST00000440899 NARS2Q96I59 477 aaKnown RBP8.49□□□□□ -1.05
UBE2D4-204ENST00000440899 METTL26Q96S19 204 aa8.49□□□□□ -1.05
UBE2D4-204ENST00000440899 FNDC4Q9H6D8 234 aaPredicted RBP8.49□□□□□ -1.05
UBE2D4-204ENST00000440899 TRAV30A0A087WSZ9 112 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 K7EQG2 157 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 DEFB4AO15263 64 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 DEDDO75618 318 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 RAB3DO95716 219 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 CD74P04233 296 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 ZNF182P17025 639 aaPredicted RBP8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 HTR2BP41595 481 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 P2RY1P47900 373 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 PPP5CP53041 499 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 TCTAP57738 103 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 SPCS3P61009 180 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 MLANAQ16655 118 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 BSXQ3C1V8 233 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 AARDQ4LEZ3 155 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 FAM219AQ8IW50 185 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 FAM24BQ8N5W8 94 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 STXBP6Q8NFX7 210 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 OR4D10Q8NGI6 311 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 OR13C8Q8NGS7 320 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 RNASE11Q8TAA1 199 aaKnown RBP8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 C2CD4CQ8TF44 421 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 ABHD1Q96SE0 405 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 MRPL36Q9P0J6 103 aaKnown RBP8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 EXTL2Q9UBQ6 330 aa8.48□□□□□ -1.05
UBE2D4-204ENST00000440899 A0A0G2JRQ6 117 aa8.47□□□□□ -1.05
UBE2D4-204ENST00000440899 RPS10-NUDT3A0A1W2PQS6 291 aa8.47□□□□□ -1.05
UBE2D4-204ENST00000440899 CDS2O95674 445 aa8.47□□□□□ -1.05
UBE2D4-204ENST00000440899 IGKV1-17P01599 117 aa8.47□□□□□ -1.05
UBE2D4-204ENST00000440899 SPP1P10451 314 aa8.47□□□□□ -1.05
UBE2D4-204ENST00000440899 EIF2B2P49770 351 aaKnown RBP8.47□□□□□ -1.05
UBE2D4-204ENST00000440899 TAS2R19P59542 299 aa8.47□□□□□ -1.05
UBE2D4-204ENST00000440899 CTF1Q16619 201 aa8.47□□□□□ -1.05
UBE2D4-204ENST00000440899 SCGB2B2Q4G0G5 96 aa8.47□□□□□ -1.05
UBE2D4-204ENST00000440899 STEAP1BQ6NZ63 245 aa8.47□□□□□ -1.05
UBE2D4-204ENST00000440899 MORN3Q6PF18 240 aaPredicted RBP8.47□□□□□ -1.05
UBE2D4-204ENST00000440899 Q6ZRM9 215 aa8.47□□□□□ -1.05
UBE2D4-204ENST00000440899 TRPT1Q86TN4 253 aaKnown RBP8.47□□□□□ -1.05
UBE2D4-204ENST00000440899 Q8NAQ8 132 aa8.47□□□□□ -1.05
UBE2D4-204ENST00000440899 OR52E5Q8NH55 327 aa8.47□□□□□ -1.05
UBE2D4-204ENST00000440899 MARCH1Q8TCQ1 289 aa8.47□□□□□ -1.05
UBE2D4-204ENST00000440899 TMEM222Q9H0R3 208 aa8.47□□□□□ -1.05
UBE2D4-204ENST00000440899 HRH4Q9H3N8 390 aa8.47□□□□□ -1.05
UBE2D4-204ENST00000440899 HEYLQ9NQ87 328 aaPredicted RBP8.47□□□□□ -1.05
UBE2D4-204ENST00000440899 C11orf94C9JXX5 98 aa8.46□□□□□ -1.06
UBE2D4-204ENST00000440899 GABARAPH6UMI1 98 aa8.46□□□□□ -1.06
UBE2D4-204ENST00000440899 GABARAPO95166 117 aa8.46□□□□□ -1.06
UBE2D4-204ENST00000440899 GIG44P09565 113 aaPredicted RBP8.46□□□□□ -1.06
UBE2D4-204ENST00000440899 ZNF688P0C7X2 276 aa8.46□□□□□ -1.06
UBE2D4-204ENST00000440899 SSBP1Q04837 148 aaKnown RBP8.46□□□□□ -1.06
UBE2D4-204ENST00000440899 TIGITQ495A1 244 aa8.46□□□□□ -1.06
UBE2D4-204ENST00000440899 DCANP1Q8TF63 244 aa8.46□□□□□ -1.06
UBE2D4-204ENST00000440899 Q8WTZ3 238 aa8.46□□□□□ -1.06
UBE2D4-204ENST00000440899 GLYATL2Q8WU03 294 aa8.46□□□□□ -1.06
UBE2D4-204ENST00000440899 RBPMSQ93062 196 aaKnown RBP8.46□□□□□ -1.06
UBE2D4-204ENST00000440899 NAA50Q9GZZ1 169 aaKnown RBP8.46□□□□□ -1.06
UBE2D4-204ENST00000440899 C14orf166Q9Y224 244 aaKnown RBP8.46□□□□□ -1.06
UBE2D4-204ENST00000440899 DNAH6Q9C0G6 4158 aa8.46□□□□□ -1.06
UBE2D4-204ENST00000440899 HECTD4Q9Y4D8 3996 aa8.46□□□□□ -1.06
UBE2D4-204ENST00000440899 TEX13DA0A0J9YY54 714 aaPredicted RBP8.45□□□□□ -1.06
UBE2D4-204ENST00000440899 HELTA6NFD8 242 aa8.45□□□□□ -1.06
UBE2D4-204ENST00000440899 OR5AC1P0C628 307 aa8.45□□□□□ -1.06
UBE2D4-204ENST00000440899 RBMY1A1P0DJD3 496 aaKnown RBP8.45□□□□□ -1.06
UBE2D4-204ENST00000440899 RBMY1CP0DJD4 496 aa8.45□□□□□ -1.06
UBE2D4-204ENST00000440899 SLC25A4P12235 298 aa8.45□□□□□ -1.06
UBE2D4-204ENST00000440899 MIFP14174 115 aa8.45□□□□□ -1.06
UBE2D4-204ENST00000440899 AP2S1P53680 142 aaPredicted RBP8.45□□□□□ -1.06
UBE2D4-204ENST00000440899 YPEL3P61236 119 aaPredicted RBP8.45□□□□□ -1.06
UBE2D4-204ENST00000440899 MRPS10P82664 201 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms