RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 GPN1Q9HCN4 374 aaPredicted RBP13.7□□□□□ -0.22
CPSF4-205ENST00000440514 U3KQ87 197 aa13.7□□□□□ -0.22
CPSF4-205ENST00000440514 TMEM213A2RRL7 107 aa13.69□□□□□ -0.22
CPSF4-205ENST00000440514 MPTX1A8MV57 137 aa13.69□□□□□ -0.22
CPSF4-205ENST00000440514 A8MWP6 167 aa13.69□□□□□ -0.22
CPSF4-205ENST00000440514 NPY1RP25929 384 aa13.69□□□□□ -0.22
CPSF4-205ENST00000440514 OPRK1P41145 380 aa13.69□□□□□ -0.22
CPSF4-205ENST00000440514 C2orf83Q53S99 150 aa13.69□□□□□ -0.22
CPSF4-205ENST00000440514 SPSB3Q6PJ21 355 aa13.69□□□□□ -0.22
CPSF4-205ENST00000440514 DUSP18Q8NEJ0 188 aa13.69□□□□□ -0.22
CPSF4-205ENST00000440514 ZNF414Q96IQ9 312 aa13.69□□□□□ -0.22
CPSF4-205ENST00000440514 CIB3Q96Q77 187 aaPredicted RBP13.69□□□□□ -0.22
CPSF4-205ENST00000440514 SEC22CQ9BRL7 303 aa13.69□□□□□ -0.22
CPSF4-205ENST00000440514 SIGLEC8Q9NYZ4 499 aa13.69□□□□□ -0.22
CPSF4-205ENST00000440514 MRPL36Q9P0J6 103 aaKnown RBP13.69□□□□□ -0.22
CPSF4-205ENST00000440514 SELENOKQ9Y6D0 94 aa13.69□□□□□ -0.22
CPSF4-205ENST00000440514 IGHV3OR16-8A0A075B7F1 116 aa13.68□□□□□ -0.22
CPSF4-205ENST00000440514 PRAF2O60831 178 aa13.68□□□□□ -0.22
CPSF4-205ENST00000440514 CTSGP08311 255 aa13.68□□□□□ -0.22
CPSF4-205ENST00000440514 FOLR2P14207 255 aa13.68□□□□□ -0.22
CPSF4-205ENST00000440514 DCTN2Q13561 401 aaKnown RBP13.68□□□□□ -0.22
CPSF4-205ENST00000440514 MLANAQ16655 118 aa13.68□□□□□ -0.22
CPSF4-205ENST00000440514 TMEM190Q8WZ59 177 aa13.68□□□□□ -0.22
CPSF4-205ENST00000440514 PALMDQ9NP74 551 aa13.68□□□□□ -0.22
CPSF4-205ENST00000440514 RPS10-NUDT3A0A1W2PQS6 291 aa13.67□□□□□ -0.22
CPSF4-205ENST00000440514 IZUMO1RA6ND01 250 aa13.67□□□□□ -0.22
CPSF4-205ENST00000440514 GNG7O60262 68 aa13.67□□□□□ -0.22
CPSF4-205ENST00000440514 IFNA10P01566 189 aa13.67□□□□□ -0.22
CPSF4-205ENST00000440514 IAPPP10997 89 aa13.67□□□□□ -0.22
CPSF4-205ENST00000440514 GP9P14770 177 aa13.67□□□□□ -0.22
CPSF4-205ENST00000440514 FCGR2BP31994 310 aaPredicted RBP13.67□□□□□ -0.22
CPSF4-205ENST00000440514 TM4SF20Q53R12 229 aa13.67□□□□□ -0.22
CPSF4-205ENST00000440514 ETFRF1Q6IPR1 90 aa13.67□□□□□ -0.22
CPSF4-205ENST00000440514 RNASEH2CQ8TDP1 164 aaKnown RBP13.67□□□□□ -0.22
CPSF4-205ENST00000440514 DYNLRB2Q8TF09 96 aa13.67□□□□□ -0.22
CPSF4-205ENST00000440514 ZNF431Q8TF32 576 aaPredicted RBP13.67□□□□□ -0.22
CPSF4-205ENST00000440514 MAGT1Q9H0U3 335 aa13.67□□□□□ -0.22
CPSF4-205ENST00000440514 NDUFA4O00483 81 aa13.66□□□□□ -0.22
CPSF4-205ENST00000440514 NUPL2O15504 423 aaKnown RBP13.66□□□□□ -0.22
CPSF4-205ENST00000440514 IL5P05113 134 aa13.66□□□□□ -0.22
CPSF4-205ENST00000440514 NPBWR1P48145 328 aa13.66□□□□□ -0.22
CPSF4-205ENST00000440514 DEFB121Q5J5C9 76 aa13.66□□□□□ -0.22
CPSF4-205ENST00000440514 UFC1Q9Y3C8 167 aa13.66□□□□□ -0.22
CPSF4-205ENST00000440514 CBLN1P23435 193 aa13.65□□□□□ -0.22
CPSF4-205ENST00000440514 CD300EQ496F6 205 aaPredicted RBP13.65□□□□□ -0.22
CPSF4-205ENST00000440514 LCN12Q6JVE5 192 aa13.65□□□□□ -0.22
CPSF4-205ENST00000440514 C20orf24Q9BUV8 137 aa13.65□□□□□ -0.22
CPSF4-205ENST00000440514 CCSO14618 274 aa13.64□□□□□ -0.23
CPSF4-205ENST00000440514 ZNF207O43670 478 aaKnown RBP13.64□□□□□ -0.23
CPSF4-205ENST00000440514 RAB11AP62491 216 aa13.64□□□□□ -0.23
CPSF4-205ENST00000440514 RELQ04864 619 aaPredicted RBP13.64□□□□□ -0.23
CPSF4-205ENST00000440514 BTNL8Q6UX41 500 aa13.64□□□□□ -0.23
CPSF4-205ENST00000440514 UXS1Q8NBZ7 420 aa13.64□□□□□ -0.23
CPSF4-205ENST00000440514 MLXQ9UH92 298 aa13.64□□□□□ -0.23
CPSF4-205ENST00000440514 LSM4Q9Y4Z0 139 aaKnown RBP13.64□□□□□ -0.23
CPSF4-205ENST00000440514 SNRPGP15A8MWD9 76 aa13.63□□□□□ -0.23
CPSF4-205ENST00000440514 WRBO00258 174 aa13.63□□□□□ -0.23
CPSF4-205ENST00000440514 SYNGR2O43760 224 aa13.63□□□□□ -0.23
CPSF4-205ENST00000440514 SLC25A4P12235 298 aa13.63□□□□□ -0.23
CPSF4-205ENST00000440514 RND2P52198 227 aa13.63□□□□□ -0.23
CPSF4-205ENST00000440514 ELLP55199 621 aaPredicted RBP13.63□□□□□ -0.23
CPSF4-205ENST00000440514 DEFB114Q30KQ6 69 aa13.63□□□□□ -0.23
CPSF4-205ENST00000440514 NRARPQ7Z6K4 114 aa13.63□□□□□ -0.23
CPSF4-205ENST00000440514 C12orf45Q8N5I9 185 aaPredicted RBP13.63□□□□□ -0.23
CPSF4-205ENST00000440514 OR4D5Q8NGN0 318 aa13.63□□□□□ -0.23
CPSF4-205ENST00000440514 OR4X1Q8NH49 305 aa13.63□□□□□ -0.23
CPSF4-205ENST00000440514 OR10C1Q96KK4 312 aa13.63□□□□□ -0.23
CPSF4-205ENST00000440514 MARVELD1Q9BSK0 173 aa13.63□□□□□ -0.23
CPSF4-205ENST00000440514 DAZ1Q9NQZ3 744 aaKnown RBP13.63□□□□□ -0.23
CPSF4-205ENST00000440514 SORL1Q92673 2214 aa13.63□□□□□ -0.23
CPSF4-205ENST00000440514 TRAV30A0A087WSZ9 112 aa13.62□□□□□ -0.23
CPSF4-205ENST00000440514 C15orf62A8K5M9 175 aa13.62□□□□□ -0.23
CPSF4-205ENST00000440514 INMT-MINDY4F8WBC2 141 aa13.62□□□□□ -0.23
CPSF4-205ENST00000440514 CLN5O75503 358 aa13.62□□□□□ -0.23
CPSF4-205ENST00000440514 YIF1AO95070 293 aa13.62□□□□□ -0.23
CPSF4-205ENST00000440514 TMEM50AO95807 157 aa13.62□□□□□ -0.23
CPSF4-205ENST00000440514 PTTG1O95997 202 aa13.62□□□□□ -0.23
CPSF4-205ENST00000440514 IAH1Q2TAA2 248 aaPredicted RBP13.62□□□□□ -0.23
CPSF4-205ENST00000440514 PRSS54Q6PEW0 395 aa13.62□□□□□ -0.23
CPSF4-205ENST00000440514 SLC16A13Q7RTY0 426 aa13.62□□□□□ -0.23
CPSF4-205ENST00000440514 OR2K2Q8NGT1 345 aa13.62□□□□□ -0.23
CPSF4-205ENST00000440514 TECRQ9NZ01 308 aaKnown RBP13.62□□□□□ -0.23
CPSF4-205ENST00000440514 PAIP2BQ9ULR5 123 aaKnown RBP13.62□□□□□ -0.23
CPSF4-205ENST00000440514 H3BP45 60 aa13.61□□□□□ -0.23
CPSF4-205ENST00000440514 SCGB1D2O95969 90 aa13.61□□□□□ -0.23
CPSF4-205ENST00000440514 IFNA4P05014 189 aa13.61□□□□□ -0.23
CPSF4-205ENST00000440514 C8orf88P0DMB2 117 aa13.61□□□□□ -0.23
CPSF4-205ENST00000440514 NKX2-1P43699 371 aaPredicted RBP13.61□□□□□ -0.23
CPSF4-205ENST00000440514 POLR2GP62487 172 aaKnown RBP eCLIP13.61□□□□□ -0.23
CPSF4-205ENST00000440514 TIGITQ495A1 244 aa13.61□□□□□ -0.23
CPSF4-205ENST00000440514 TMEM61Q8N0U2 210 aa13.61□□□□□ -0.23
CPSF4-205ENST00000440514 ZBTB8BQ8NAP8 495 aaPredicted RBP13.61□□□□□ -0.23
CPSF4-205ENST00000440514 MARC2Q969Z3 335 aa13.61□□□□□ -0.23
CPSF4-205ENST00000440514 WDR89Q96FK6 387 aaPredicted RBP13.61□□□□□ -0.23
CPSF4-205ENST00000440514 ACY3Q96HD9 319 aa13.61□□□□□ -0.23
CPSF4-205ENST00000440514 MRPL27Q9P0M9 148 aaKnown RBP13.61□□□□□ -0.23
CPSF4-205ENST00000440514 SSSCA1O60232 199 aa13.6□□□□□ -0.23
CPSF4-205ENST00000440514 SCAF4O95104 1147 aaKnown RBP13.6□□□□□ -0.23
CPSF4-205ENST00000440514 ID3Q02535 119 aa13.6□□□□□ -0.23
CPSF4-205ENST00000440514 CD69Q07108 199 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms