RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 RNASEH2CQ8TDP1 164 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1A-204ENST00000440083 ABHD5Q8WTS1 349 aa11.54□□□□□ -0.56
TNFRSF1A-204ENST00000440083 EAF1Q96JC9 268 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1A-204ENST00000440083 EIF5A2Q9GZV4 153 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1A-204ENST00000440083 CGB1A6NKQ9 187 aa11.53□□□□□ -0.56
TNFRSF1A-204ENST00000440083 TSPAN9O75954 239 aa11.53□□□□□ -0.56
TNFRSF1A-204ENST00000440083 IFNA1P01562 189 aa11.53□□□□□ -0.56
TNFRSF1A-204ENST00000440083 MDKP21741 143 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-204ENST00000440083 BRS3P32247 399 aa11.53□□□□□ -0.56
TNFRSF1A-204ENST00000440083 OPRK1P41145 380 aa11.53□□□□□ -0.56
TNFRSF1A-204ENST00000440083 WT1-ASQ06250 92 aa11.53□□□□□ -0.56
TNFRSF1A-204ENST00000440083 FAM122CQ6P4D5 195 aa11.53□□□□□ -0.56
TNFRSF1A-204ENST00000440083 SLC16A13Q7RTY0 426 aa11.53□□□□□ -0.56
TNFRSF1A-204ENST00000440083 NPBQ8NG41 125 aa11.53□□□□□ -0.56
TNFRSF1A-204ENST00000440083 OR10G4Q8NGN3 311 aa11.53□□□□□ -0.56
TNFRSF1A-204ENST00000440083 OR10G9Q8NGN4 311 aa11.53□□□□□ -0.56
TNFRSF1A-204ENST00000440083 OR10G7Q8NGN6 311 aa11.53□□□□□ -0.56
TNFRSF1A-204ENST00000440083 OR5R1Q8NH85 324 aa11.53□□□□□ -0.56
TNFRSF1A-204ENST00000440083 RCC1LQ96I51 464 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-204ENST00000440083 GGTLC1Q9BX51 225 aa11.53□□□□□ -0.56
TNFRSF1A-204ENST00000440083 ACTR3CQ9C0K3 210 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-204ENST00000440083 VSIRQ9H7M9 311 aa11.53□□□□□ -0.56
TNFRSF1A-204ENST00000440083 TNCP24821 2201 aa11.53□□□□□ -0.56
TNFRSF1A-204ENST00000440083 CTXND1A0A1B0GTU2 59 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 MAP1LC3B2A6NCE7 125 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 F8W036 122 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 CYB5BO43169 146 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 NDUFA3O95167 84 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 CNIH1O95406 144 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 APOC3P02656 99 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 TMEM11P17152 192 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 M6PRP20645 277 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 GPX4P36969 197 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 SRSF3P84103 164 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 CD69Q07108 199 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 MRGPRG-AS1Q2M3A8 158 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 ARSJQ5FYB0 599 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 SPSB3Q6PJ21 355 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 LCN15Q6UWW0 184 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 MBD3L1Q8WWY6 194 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 SRSF12Q8WXF0 261 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 MGST2Q99735 147 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 SRSF8Q9BRL6 282 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 MAP1LC3BQ9GZQ8 125 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 SLC25A22Q9H936 323 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 SLC39A9Q9NUM3 307 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 C1RLQ9NZP8 487 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 ANK2Q01484 3957 aa11.52□□□□□ -0.57
TNFRSF1A-204ENST00000440083 TRAV1-1A0A0B4J248 108 aa11.51□□□□□ -0.57
TNFRSF1A-204ENST00000440083 A0A1B0GW64 132 aa11.51□□□□□ -0.57
TNFRSF1A-204ENST00000440083 IGLC7A0M8Q6 106 aa11.51□□□□□ -0.57
TNFRSF1A-204ENST00000440083 A6NDX4 124 aa11.51□□□□□ -0.57
TNFRSF1A-204ENST00000440083 E7EUB6 86 aa11.51□□□□□ -0.57
TNFRSF1A-204ENST00000440083 CORTO00230 105 aa11.51□□□□□ -0.57
TNFRSF1A-204ENST00000440083 REG1AP05451 166 aa11.51□□□□□ -0.57
TNFRSF1A-204ENST00000440083 FAM106CPP0CH98 169 aa11.51□□□□□ -0.57
TNFRSF1A-204ENST00000440083 CDC34P49427 236 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF1A-204ENST00000440083 DEFA5Q01523 94 aa11.51□□□□□ -0.57
TNFRSF1A-204ENST00000440083 ETFRF1Q6IPR1 90 aa11.51□□□□□ -0.57
TNFRSF1A-204ENST00000440083 TMEM144Q7Z5S9 345 aa11.51□□□□□ -0.57
TNFRSF1A-204ENST00000440083 ZNF114Q8NC26 417 aa11.51□□□□□ -0.57
TNFRSF1A-204ENST00000440083 CACNG8Q8WXS5 425 aa11.51□□□□□ -0.57
TNFRSF1A-204ENST00000440083 P2RX4Q99571 388 aa11.51□□□□□ -0.57
TNFRSF1A-204ENST00000440083 PXMP4Q9Y6I8 212 aa11.51□□□□□ -0.57
TNFRSF1A-204ENST00000440083 RBFOX3A6NFN3 312 aa11.5□□□□□ -0.57
TNFRSF1A-204ENST00000440083 CD5P06127 495 aa11.5□□□□□ -0.57
TNFRSF1A-204ENST00000440083 SFTA3P0C7M3 94 aa11.5□□□□□ -0.57
TNFRSF1A-204ENST00000440083 PPT1P50897 306 aa11.5□□□□□ -0.57
TNFRSF1A-204ENST00000440083 B2MP61769 119 aa11.5□□□□□ -0.57
TNFRSF1A-204ENST00000440083 C5orf64Q2M2E5 130 aa11.5□□□□□ -0.57
TNFRSF1A-204ENST00000440083 MISP3Q96FF7 219 aa11.5□□□□□ -0.57
TNFRSF1A-204ENST00000440083 SMDT1Q9H4I9 107 aa11.5□□□□□ -0.57
TNFRSF1A-204ENST00000440083 A0A1W2PPV4 95 aa11.49□□□□□ -0.57
TNFRSF1A-204ENST00000440083 TMEM89A2RUT3 159 aa11.49□□□□□ -0.57
TNFRSF1A-204ENST00000440083 NCBP2LA6PVI3 153 aaKnown RBP11.49□□□□□ -0.57
TNFRSF1A-204ENST00000440083 FGF8P55075 233 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF1A-204ENST00000440083 EBI3Q14213 229 aa11.49□□□□□ -0.57
TNFRSF1A-204ENST00000440083 ZNF726P1Q15940 193 aa11.49□□□□□ -0.57
TNFRSF1A-204ENST00000440083 HAGHQ16775 308 aa11.49□□□□□ -0.57
TNFRSF1A-204ENST00000440083 MIC13Q5XKP0 118 aa11.49□□□□□ -0.57
TNFRSF1A-204ENST00000440083 ACY3Q96HD9 319 aa11.49□□□□□ -0.57
TNFRSF1A-204ENST00000440083 SEC11CQ9BY50 192 aa11.49□□□□□ -0.57
TNFRSF1A-204ENST00000440083 GNG13Q9P2W3 67 aa11.49□□□□□ -0.57
TNFRSF1A-204ENST00000440083 LSM4Q9Y4Z0 139 aaKnown RBP11.49□□□□□ -0.57
TNFRSF1A-204ENST00000440083 TEX22C9J3V5 150 aa11.48□□□□□ -0.57
TNFRSF1A-204ENST00000440083 CRYBA1P05813 215 aa11.48□□□□□ -0.57
TNFRSF1A-204ENST00000440083 AREGP15514 252 aa11.48□□□□□ -0.57
TNFRSF1A-204ENST00000440083 RPL29P47914 159 aaKnown RBP11.48□□□□□ -0.57
TNFRSF1A-204ENST00000440083 CCL20P78556 96 aa11.48□□□□□ -0.57
TNFRSF1A-204ENST00000440083 GAMTQ14353 236 aa11.48□□□□□ -0.57
TNFRSF1A-204ENST00000440083 FXYD3Q14802 87 aa11.48□□□□□ -0.57
TNFRSF1A-204ENST00000440083 AWAT1Q58HT5 328 aa11.48□□□□□ -0.57
TNFRSF1A-204ENST00000440083 ZNF506Q5JVG8 444 aa11.48□□□□□ -0.57
TNFRSF1A-204ENST00000440083 Q6ZSV7 163 aa11.48□□□□□ -0.57
TNFRSF1A-204ENST00000440083 IQCF2Q8IXL9 164 aa11.48□□□□□ -0.57
TNFRSF1A-204ENST00000440083 SVBPQ8N300 66 aa11.48□□□□□ -0.57
TNFRSF1A-204ENST00000440083 RPP25LQ8N5L8 163 aaKnown RBP11.48□□□□□ -0.57
TNFRSF1A-204ENST00000440083 Q8N6K4 173 aa11.48□□□□□ -0.57
TNFRSF1A-204ENST00000440083 STPG3Q8N7X2 389 aa11.48□□□□□ -0.57
TNFRSF1A-204ENST00000440083 OR1P1Q8NH06 330 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms