RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 SLC35E1Q96K37 410 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 SNHG12Q9BXW3 62 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 GNB4Q9HAV0 340 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 TMEM106BQ9NUM4 274 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 Q9UFV3 132 aa10.98□□□□□ -0.65
HERPUD1-204ENST00000439977 C17orf100A8MU93 164 aa10.97□□□□□ -0.65
HERPUD1-204ENST00000439977 SLC25A17O43808 307 aa10.97□□□□□ -0.65
HERPUD1-204ENST00000439977 OR5G3P0C626 314 aa10.97□□□□□ -0.65
HERPUD1-204ENST00000439977 ERHP84090 104 aaKnown RBP10.97□□□□□ -0.65
HERPUD1-204ENST00000439977 SFXN3Q9BWM7 321 aa10.97□□□□□ -0.65
HERPUD1-204ENST00000439977 NDUFA4L2Q9NRX3 87 aa10.97□□□□□ -0.65
HERPUD1-204ENST00000439977 BET1LQ9NYM9 111 aa10.97□□□□□ -0.65
HERPUD1-204ENST00000439977 NKX6-3A6NJ46 265 aa10.97□□□□□ -0.65
HERPUD1-204ENST00000439977 H3BTX0 84 aa10.97□□□□□ -0.65
HERPUD1-204ENST00000439977 IBA57Q5T440 356 aaKnown RBP10.97□□□□□ -0.65
HERPUD1-204ENST00000439977 RCHY1Q96PM5 261 aa10.97□□□□□ -0.65
HERPUD1-204ENST00000439977 SLC25A2Q9BXI2 301 aa10.97□□□□□ -0.65
HERPUD1-204ENST00000439977 ZNF355PQ9NSJ1 428 aa10.97□□□□□ -0.65
HERPUD1-204ENST00000439977 RPH3ALQ9UNE2 315 aa10.97□□□□□ -0.65
HERPUD1-204ENST00000439977 IGLV2-8P01709 118 aa10.96□□□□□ -0.65
HERPUD1-204ENST00000439977 TPPP2P59282 170 aa10.96□□□□□ -0.65
HERPUD1-204ENST00000439977 TAS2R45P59539 299 aa10.96□□□□□ -0.65
HERPUD1-204ENST00000439977 ZNF833PQ6ZTB9 187 aa10.96□□□□□ -0.65
HERPUD1-204ENST00000439977 OR1L8Q8NGR8 309 aa10.96□□□□□ -0.65
HERPUD1-204ENST00000439977 GAL3ST2Q9H3Q3 398 aa10.96□□□□□ -0.65
HERPUD1-204ENST00000439977 ZNF430Q9H8G1 570 aaPredicted RBP10.96□□□□□ -0.65
HERPUD1-204ENST00000439977 CGB1A6NKQ9 187 aa10.96□□□□□ -0.66
HERPUD1-204ENST00000439977 C16orf97H3BN30 126 aa10.96□□□□□ -0.66
HERPUD1-204ENST00000439977 MOSP00540 346 aa10.96□□□□□ -0.66
HERPUD1-204ENST00000439977 TNFRSF1AP19438 455 aa10.96□□□□□ -0.66
HERPUD1-204ENST00000439977 ORM2P19652 201 aa10.96□□□□□ -0.66
HERPUD1-204ENST00000439977 PMCHP20382 165 aa10.96□□□□□ -0.66
HERPUD1-204ENST00000439977 CEACAM8P31997 349 aaPredicted RBP10.96□□□□□ -0.66
HERPUD1-204ENST00000439977 KRTDAPP60985 99 aa10.96□□□□□ -0.66
HERPUD1-204ENST00000439977 SELENOTP62341 195 aa10.96□□□□□ -0.66
HERPUD1-204ENST00000439977 RANP62826 216 aaKnown RBP10.96□□□□□ -0.66
HERPUD1-204ENST00000439977 GNG5P63218 68 aa10.96□□□□□ -0.66
HERPUD1-204ENST00000439977 TEX36Q5VZQ5 186 aa10.96□□□□□ -0.66
HERPUD1-204ENST00000439977 IGFL3Q6UXB1 125 aa10.96□□□□□ -0.66
HERPUD1-204ENST00000439977 BLNKQ8WV28 456 aa10.96□□□□□ -0.66
HERPUD1-204ENST00000439977 FAM167A-AS1Q96KT0 104 aa10.96□□□□□ -0.66
HERPUD1-204ENST00000439977 NCOR1P1Q9H4R4 102 aa10.96□□□□□ -0.66
HERPUD1-204ENST00000439977 DNAJC4Q9NNZ3 241 aa10.96□□□□□ -0.66
HERPUD1-204ENST00000439977 TANC2Q9HCD6 1990 aa10.96□□□□□ -0.66
HERPUD1-204ENST00000439977 PPIAL4EA0A075B759 164 aa10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 PPIAL4DF5H284 164 aa10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 COX7A2P2O60397 106 aa10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 PPIAL4FP0DN26 164 aa10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 FAM57AQ8TBR7 257 aa10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 C2orf88Q9BSF0 95 aa10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 PPIAL4AQ9Y536 164 aa10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 C1orf194Q5T5A4 169 aa10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 PATE2Q6UY27 113 aa10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 FAM19A2Q8N3H0 131 aa10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 OSR1Q8TAX0 266 aaPredicted RBP10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 TLN1Q9Y490 2541 aaKnown RBP10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 DLL1O00548 723 aa10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 G0S2P27469 103 aa10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 SRIP30626 198 aa10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 CX3CL1P78423 397 aa10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 OR5AN1Q8NGI8 311 aa10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 LINC00574Q9H8X3 128 aa10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 CTSZQ9UBR2 303 aa10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 AMMECR1Q9Y4X0 333 aaPredicted RBP10.95□□□□□ -0.66
HERPUD1-204ENST00000439977 THBDP07204 575 aa10.94□□□□□ -0.66
HERPUD1-204ENST00000439977 OR4C13Q8NGP0 309 aa10.94□□□□□ -0.66
HERPUD1-204ENST00000439977 GSX1Q9H4S2 264 aaPredicted RBP10.94□□□□□ -0.66
HERPUD1-204ENST00000439977 ABCA4P78363 2273 aa10.94□□□□□ -0.66
HERPUD1-204ENST00000439977 LYNX1G3V0Z9 82 aa10.94□□□□□ -0.66
HERPUD1-204ENST00000439977 ZNF253O75346 499 aa10.94□□□□□ -0.66
HERPUD1-204ENST00000439977 CRYABP02511 175 aaKnown RBP10.94□□□□□ -0.66
HERPUD1-204ENST00000439977 LYNX1P0DP58 116 aa10.94□□□□□ -0.66
HERPUD1-204ENST00000439977 TPTE2P1Q5T6R2 138 aa10.94□□□□□ -0.66
HERPUD1-204ENST00000439977 C10orf113Q5VZT2 155 aa10.94□□□□□ -0.66
HERPUD1-204ENST00000439977 LEMD1Q68G75 181 aa10.94□□□□□ -0.66
HERPUD1-204ENST00000439977 TMEM136Q6ZRR5 245 aa10.94□□□□□ -0.66
HERPUD1-204ENST00000439977 BEND2Q8NDZ0 799 aa10.94□□□□□ -0.66
HERPUD1-204ENST00000439977 TMEM178BH3BS89 294 aa10.93□□□□□ -0.66
HERPUD1-204ENST00000439977 ISLRO14498 428 aa10.93□□□□□ -0.66
HERPUD1-204ENST00000439977 NDUFB3O43676 98 aa10.93□□□□□ -0.66
HERPUD1-204ENST00000439977 CNTFRP26992 372 aa10.93□□□□□ -0.66
HERPUD1-204ENST00000439977 PPOXP50336 477 aa10.93□□□□□ -0.66
HERPUD1-204ENST00000439977 BATFQ16520 125 aa10.93□□□□□ -0.66
HERPUD1-204ENST00000439977 SIGLECL1Q8N7X8 197 aa10.93□□□□□ -0.66
HERPUD1-204ENST00000439977 ABHD17AQ96GS6 310 aa10.93□□□□□ -0.66
HERPUD1-204ENST00000439977 PAXXQ9BUH6 204 aa10.93□□□□□ -0.66
HERPUD1-204ENST00000439977 FBXL7Q9UJT9 491 aa10.93□□□□□ -0.66
HERPUD1-204ENST00000439977 PSMB11A5LHX3 300 aa10.93□□□□□ -0.66
HERPUD1-204ENST00000439977 FNDC10F2Z333 226 aa10.93□□□□□ -0.66
HERPUD1-204ENST00000439977 AMTP48728 403 aa10.93□□□□□ -0.66
HERPUD1-204ENST00000439977 LINC00305Q7Z4B0 112 aa10.93□□□□□ -0.66
HERPUD1-204ENST00000439977 IGF2BP2-AS1Q96M15 143 aa10.93□□□□□ -0.66
HERPUD1-204ENST00000439977 GNB1LQ9BYB4 327 aa10.93□□□□□ -0.66
HERPUD1-204ENST00000439977 TBL2Q9Y4P3 447 aaKnown RBP10.93□□□□□ -0.66
HERPUD1-204ENST00000439977 LY96Q9Y6Y9 160 aa10.93□□□□□ -0.66
HERPUD1-204ENST00000439977 A0A1W2PRE2 83 aa10.92□□□□□ -0.66
HERPUD1-204ENST00000439977 PRRG2O14669 202 aa10.92□□□□□ -0.66
HERPUD1-204ENST00000439977 TCAPO15273 167 aa10.92□□□□□ -0.66
HERPUD1-204ENST00000439977 NTF3P20783 257 aa10.92□□□□□ -0.66
HERPUD1-204ENST00000439977 OR1B1Q8NGR6 318 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms