RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 GLYATL2Q8WU03 294 aa12.03□□□□□ -0.48
SNRPD3-204ENST00000439775 RBPMSQ93062 196 aaKnown RBP12.03□□□□□ -0.48
SNRPD3-204ENST00000439775 RNF183Q96D59 192 aa12.03□□□□□ -0.48
SNRPD3-204ENST00000439775 VSIRQ9H7M9 311 aa12.03□□□□□ -0.48
SNRPD3-204ENST00000439775 NAA60Q9H7X0 242 aa12.03□□□□□ -0.48
SNRPD3-204ENST00000439775 MAP6D1Q9H9H5 199 aa12.03□□□□□ -0.48
SNRPD3-204ENST00000439775 PUS1Q9Y606 427 aaKnown RBP eCLIP12.03□□□□□ -0.48
SNRPD3-204ENST00000439775 TEX13DA0A0J9YY54 714 aaPredicted RBP12.02□□□□□ -0.49
SNRPD3-204ENST00000439775 TMEM50AO95807 157 aa12.02□□□□□ -0.49
SNRPD3-204ENST00000439775 ATF4P18848 351 aaPredicted RBP12.02□□□□□ -0.49
SNRPD3-204ENST00000439775 TMBIM6P55061 237 aa12.02□□□□□ -0.49
SNRPD3-204ENST00000439775 PAFAH1B2P68402 229 aa12.02□□□□□ -0.49
SNRPD3-204ENST00000439775 DHODHQ02127 395 aa12.02□□□□□ -0.49
SNRPD3-204ENST00000439775 IL18Q14116 193 aa12.02□□□□□ -0.49
SNRPD3-204ENST00000439775 Q6ZRM9 215 aa12.02□□□□□ -0.49
SNRPD3-204ENST00000439775 LYG2Q86SG7 212 aa12.02□□□□□ -0.49
SNRPD3-204ENST00000439775 CLVS1Q8IUQ0 354 aaPredicted RBP12.02□□□□□ -0.49
SNRPD3-204ENST00000439775 APRG1Q8IVJ8 170 aa12.02□□□□□ -0.49
SNRPD3-204ENST00000439775 OR4C16Q8NGL9 310 aa12.02□□□□□ -0.49
SNRPD3-204ENST00000439775 DIRAS2Q96HU8 199 aa12.02□□□□□ -0.49
SNRPD3-204ENST00000439775 PRRT1Q99946 306 aa12.02□□□□□ -0.49
SNRPD3-204ENST00000439775 FNDC4Q9H6D8 234 aaPredicted RBP12.02□□□□□ -0.49
SNRPD3-204ENST00000439775 IGHV3OR16-13A0A075B7E8 117 aa12.01□□□□□ -0.49
SNRPD3-204ENST00000439775 IGHV3-74A0A0B4J1X5 117 aa12.01□□□□□ -0.49
SNRPD3-204ENST00000439775 TRAV2A0A0B4J234 112 aa12.01□□□□□ -0.49
SNRPD3-204ENST00000439775 A0A0J9YWU9 116 aa12.01□□□□□ -0.49
SNRPD3-204ENST00000439775 A0A1B0GU03 582 aa12.01□□□□□ -0.49
SNRPD3-204ENST00000439775 CRYM-AS1A6NIL9 109 aa12.01□□□□□ -0.49
SNRPD3-204ENST00000439775 CLN5O75503 358 aa12.01□□□□□ -0.49
SNRPD3-204ENST00000439775 SCGB2A1O75556 95 aa12.01□□□□□ -0.49
SNRPD3-204ENST00000439775 RPL35AP18077 110 aaKnown RBP12.01□□□□□ -0.49
SNRPD3-204ENST00000439775 OPRK1P41145 380 aa12.01□□□□□ -0.49
SNRPD3-204ENST00000439775 TFPI2P48307 235 aa12.01□□□□□ -0.49
SNRPD3-204ENST00000439775 TCF24Q7RTU0 167 aa12.01□□□□□ -0.49
SNRPD3-204ENST00000439775 OR4X1Q8NH49 305 aa12.01□□□□□ -0.49
SNRPD3-204ENST00000439775 LHFPL5Q8TAF8 219 aa12.01□□□□□ -0.49
SNRPD3-204ENST00000439775 ST8SIA2Q92186 375 aa12.01□□□□□ -0.49
SNRPD3-204ENST00000439775 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.01□□□□□ -0.49
SNRPD3-204ENST00000439775 GPR132Q9UNW8 380 aa12.01□□□□□ -0.49
SNRPD3-204ENST00000439775 IGKV3-7A0A075B6H7 116 aa12□□□□□ -0.49
SNRPD3-204ENST00000439775 ANKRD20A5PA0PJZ0 165 aa12□□□□□ -0.49
SNRPD3-204ENST00000439775 GSTZ1O43708 216 aaPredicted RBP12□□□□□ -0.49
SNRPD3-204ENST00000439775 HTR2BP41595 481 aa12□□□□□ -0.49
SNRPD3-204ENST00000439775 SELENOHQ8IZQ5 122 aaKnown RBP12□□□□□ -0.49
SNRPD3-204ENST00000439775 TMEM231Q9H6L2 316 aa12□□□□□ -0.49
SNRPD3-204ENST00000439775 MRPL36Q9P0J6 103 aaKnown RBP12□□□□□ -0.49
SNRPD3-204ENST00000439775 APOHP02749 345 aaPredicted RBP11.99□□□□□ -0.49
SNRPD3-204ENST00000439775 ZNF124Q15973 351 aa11.99□□□□□ -0.49
SNRPD3-204ENST00000439775 TMEM268Q5VZI3 342 aa11.99□□□□□ -0.49
SNRPD3-204ENST00000439775 GBGT1Q8N5D6 347 aa11.99□□□□□ -0.49
SNRPD3-204ENST00000439775 OR51S1Q8NGJ8 323 aa11.99□□□□□ -0.49
SNRPD3-204ENST00000439775 CSTL1Q9H114 145 aa11.99□□□□□ -0.49
SNRPD3-204ENST00000439775 MS4A6AQ9H2W1 248 aa11.99□□□□□ -0.49
SNRPD3-204ENST00000439775 CACNG5Q9UF02 275 aa11.99□□□□□ -0.49
SNRPD3-204ENST00000439775 CACFD1Q9UGQ2 172 aa11.99□□□□□ -0.49
SNRPD3-204ENST00000439775 RSL24D1Q9UHA3 163 aaKnown RBP11.99□□□□□ -0.49
SNRPD3-204ENST00000439775 TMEM56-RWDD3S4R434 201 aa11.99□□□□□ -0.49
SNRPD3-204ENST00000439775 TRAV30A0A087WSZ9 112 aa11.98□□□□□ -0.49
SNRPD3-204ENST00000439775 RPS10-NUDT3A0A1W2PQS6 291 aa11.98□□□□□ -0.49
SNRPD3-204ENST00000439775 A0A1W2PS18 150 aa11.98□□□□□ -0.49
SNRPD3-204ENST00000439775 NUPR2A6NF83 97 aa11.98□□□□□ -0.49
SNRPD3-204ENST00000439775 MPTX1A8MV57 137 aa11.98□□□□□ -0.49
SNRPD3-204ENST00000439775 DFFBO76075 338 aa11.98□□□□□ -0.49
SNRPD3-204ENST00000439775 IGKV1-17P01599 117 aa11.98□□□□□ -0.49
SNRPD3-204ENST00000439775 CRYBB3P26998 211 aa11.98□□□□□ -0.49
SNRPD3-204ENST00000439775 EWSR1Q01844 656 aaKnown RBP eCLIP11.98□□□□□ -0.49
SNRPD3-204ENST00000439775 C2orf83Q53S99 150 aa11.98□□□□□ -0.49
SNRPD3-204ENST00000439775 LILRB2Q8N423 598 aa11.98□□□□□ -0.49
SNRPD3-204ENST00000439775 TMEM217Q8N7C4 229 aa11.98□□□□□ -0.49
SNRPD3-204ENST00000439775 GATAD1Q8WUU5 269 aa11.98□□□□□ -0.49
SNRPD3-204ENST00000439775 IL22RA2Q969J5 263 aa11.98□□□□□ -0.49
SNRPD3-204ENST00000439775 METTL26Q96S19 204 aa11.98□□□□□ -0.49
SNRPD3-204ENST00000439775 SLIRPQ9GZT3 109 aaKnown RBP11.98□□□□□ -0.49
SNRPD3-204ENST00000439775 IGHV3-66A0A0C4DH42 116 aa11.97□□□□□ -0.49
SNRPD3-204ENST00000439775 CXorf65A6NEN9 183 aa11.97□□□□□ -0.49
SNRPD3-204ENST00000439775 NOL3O60936 208 aaKnown RBP11.97□□□□□ -0.49
SNRPD3-204ENST00000439775 NPPCP23582 126 aa11.97□□□□□ -0.49
SNRPD3-204ENST00000439775 MLANAQ16655 118 aa11.97□□□□□ -0.49
SNRPD3-204ENST00000439775 SLC24A4Q8NFF2 622 aa11.97□□□□□ -0.49
SNRPD3-204ENST00000439775 RNASEH2CQ8TDP1 164 aaKnown RBP11.97□□□□□ -0.49
SNRPD3-204ENST00000439775 GPR146Q96CH1 333 aa11.97□□□□□ -0.49
SNRPD3-204ENST00000439775 HEYLQ9NQ87 328 aaPredicted RBP11.97□□□□□ -0.49
SNRPD3-204ENST00000439775 SCP2D1Q9UJQ7 156 aa11.97□□□□□ -0.49
SNRPD3-204ENST00000439775 H3BMQ9 156 aa11.96□□□□□ -0.49
SNRPD3-204ENST00000439775 DNASE2O00115 360 aaPredicted RBP11.96□□□□□ -0.49
SNRPD3-204ENST00000439775 SLC25A4P12235 298 aa11.96□□□□□ -0.49
SNRPD3-204ENST00000439775 PMS2P11Q13670 270 aa11.96□□□□□ -0.49
SNRPD3-204ENST00000439775 TMEM187Q14656 261 aa11.96□□□□□ -0.49
SNRPD3-204ENST00000439775 NMSQ5H8A3 153 aa11.96□□□□□ -0.49
SNRPD3-204ENST00000439775 OR1S2Q8NGQ3 325 aa11.96□□□□□ -0.49
SNRPD3-204ENST00000439775 TMEM230Q96A57 120 aa11.96□□□□□ -0.49
SNRPD3-204ENST00000439775 SCGB3A2Q96PL1 93 aa11.96□□□□□ -0.49
SNRPD3-204ENST00000439775 SOSTQ9BQB4 213 aa11.96□□□□□ -0.49
SNRPD3-204ENST00000439775 ALMS1Q8TCU4 4167 aa11.96□□□□□ -0.5
SNRPD3-204ENST00000439775 CEBPZOSA8MTT3 80 aa11.95□□□□□ -0.5
SNRPD3-204ENST00000439775 IGLC1P0CG04 106 aa11.95□□□□□ -0.5
SNRPD3-204ENST00000439775 SULT1A3P0DMM9 295 aa11.95□□□□□ -0.5
SNRPD3-204ENST00000439775 SULT1A4P0DMN0 295 aa11.95□□□□□ -0.5
SNRPD3-204ENST00000439775 RPL11P62913 178 aaKnown RBP11.95□□□□□ -0.5
SNRPD3-204ENST00000439775 PRSS54Q6PEW0 395 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms