RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 PIMREGQ9BSJ6 248 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 TMEM167BQ9NRX6 74 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 TMEM242Q9NWH2 141 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 MLXQ9UH92 298 aa9.38□□□□□ -0.91
SMAD3-202ENST00000439724 NPPCP23582 126 aa9.37□□□□□ -0.91
SMAD3-202ENST00000439724 ZNF674Q2M3X9 581 aa9.37□□□□□ -0.91
SMAD3-202ENST00000439724 CST9LP1Q5W188 147 aa9.37□□□□□ -0.91
SMAD3-202ENST00000439724 OR1L4Q8NGR5 311 aa9.37□□□□□ -0.91
SMAD3-202ENST00000439724 FAM168AQ92567 244 aa9.37□□□□□ -0.91
SMAD3-202ENST00000439724 MALSU1Q96EH3 234 aa9.37□□□□□ -0.91
SMAD3-202ENST00000439724 BBC3Q96PG8 261 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-202ENST00000439724 PFDN5Q99471 154 aa9.37□□□□□ -0.91
SMAD3-202ENST00000439724 LPAR2Q9HBW0 351 aa9.37□□□□□ -0.91
SMAD3-202ENST00000439724 PRELID1Q9Y255 219 aa9.37□□□□□ -0.91
SMAD3-202ENST00000439724 VWC2LB2RUY7 222 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 CNIH1O95406 144 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 PRB1P04280 392 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 C8orf88P0DMB2 117 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 BPIFB3P59826 476 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 RPL23P62829 140 aaKnown RBP9.36□□□□□ -0.91
SMAD3-202ENST00000439724 HES1Q14469 280 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 FBLN7Q53RD9 439 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 FAM24BQ8N5W8 94 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 OR1L6Q8NGR2 347 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 C10orf105Q8TEF2 133 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 TMEM37Q8WXS4 190 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 SLC25A33Q9BSK2 321 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 CTDSP1Q9GZU7 261 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 DNAJC4Q9NNZ3 241 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 DOK5Q9P104 306 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 YTHDF2Q9Y5A9 579 aaKnown RBP9.36□□□□□ -0.91
SMAD3-202ENST00000439724 DMRT1Q9Y5R6 373 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 IGHV3-48P01763 117 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 APELAP0DMC3 54 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 CTRB1P17538 263 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 RAB5AP20339 215 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 FXYD3Q14802 87 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 CTRB2Q6GPI1 263 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 C19orf35Q6ZS72 473 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 ZNF843Q8N446 348 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 C11orf52Q96A22 123 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 ZNF503Q96F45 646 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 AJUBAQ96IF1 538 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 TNFRSF19Q9NS68 423 aa9.36□□□□□ -0.91
SMAD3-202ENST00000439724 CACNA1BQ00975 2339 aa9.35□□□□□ -0.91
SMAD3-202ENST00000439724 CLDN34H7C241 214 aa9.35□□□□□ -0.91
SMAD3-202ENST00000439724 I3L2K1 104 aa9.35□□□□□ -0.91
SMAD3-202ENST00000439724 COX7A2P2O60397 106 aa9.35□□□□□ -0.91
SMAD3-202ENST00000439724 CD24P25063 80 aa9.35□□□□□ -0.91
SMAD3-202ENST00000439724 ZNF90Q03938 601 aa9.35□□□□□ -0.91
SMAD3-202ENST00000439724 PAX8Q06710 450 aa9.35□□□□□ -0.91
SMAD3-202ENST00000439724 ELOBQ15370 118 aa9.35□□□□□ -0.91
SMAD3-202ENST00000439724 ADIRFQ15847 76 aa9.35□□□□□ -0.91
SMAD3-202ENST00000439724 C10orf113Q5VZT2 155 aa9.35□□□□□ -0.91
SMAD3-202ENST00000439724 ZNF562Q6V9R5 426 aa9.35□□□□□ -0.91
SMAD3-202ENST00000439724 OR51G1Q8NGK1 321 aa9.35□□□□□ -0.91
SMAD3-202ENST00000439724 OR4X1Q8NH49 305 aa9.35□□□□□ -0.91
SMAD3-202ENST00000439724 FAM167A-AS1Q96KT0 104 aa9.35□□□□□ -0.91
SMAD3-202ENST00000439724 WNT10AQ9GZT5 417 aa9.35□□□□□ -0.91
SMAD3-202ENST00000439724 DOPEY1Q5JWR5 2465 aa9.34□□□□□ -0.91
SMAD3-202ENST00000439724 ELOA3CA0A087WX78 387 aaPredicted RBP9.34□□□□□ -0.91
SMAD3-202ENST00000439724 IGHV4-61A0A0C4DH41 118 aa9.34□□□□□ -0.91
SMAD3-202ENST00000439724 C1orf196B1AJZ1 125 aa9.34□□□□□ -0.91
SMAD3-202ENST00000439724 OR7C2O60412 319 aa9.34□□□□□ -0.91
SMAD3-202ENST00000439724 NDUFB4O95168 129 aa9.34□□□□□ -0.91
SMAD3-202ENST00000439724 TMEM11P17152 192 aa9.34□□□□□ -0.91
SMAD3-202ENST00000439724 BRS3P32247 399 aa9.34□□□□□ -0.91
SMAD3-202ENST00000439724 SAA4P35542 130 aa9.34□□□□□ -0.91
SMAD3-202ENST00000439724 ATP5J2P56134 94 aa9.34□□□□□ -0.91
SMAD3-202ENST00000439724 PLP1P60201 277 aa9.34□□□□□ -0.91
SMAD3-202ENST00000439724 RAB5BP61020 215 aa9.34□□□□□ -0.91
SMAD3-202ENST00000439724 KIAA0141Q14154 515 aaPredicted RBP9.34□□□□□ -0.91
SMAD3-202ENST00000439724 RUSC1-AS1Q66K80 236 aa9.34□□□□□ -0.91
SMAD3-202ENST00000439724 CLEC2AQ6UVW9 174 aa9.34□□□□□ -0.91
SMAD3-202ENST00000439724 PATE2Q6UY27 113 aa9.34□□□□□ -0.91
SMAD3-202ENST00000439724 UHRF2Q96PU4 802 aa9.34□□□□□ -0.91
SMAD3-202ENST00000439724 SLC25A2Q9BXI2 301 aa9.34□□□□□ -0.91
SMAD3-202ENST00000439724 RELNP78509 3460 aa9.33□□□□□ -0.92
SMAD3-202ENST00000439724 SCO2A0A1W2PP80 73 aa9.33□□□□□ -0.92
SMAD3-202ENST00000439724 NPIPB5A8MRT5 1133 aa9.33□□□□□ -0.92
SMAD3-202ENST00000439724 NPFFO15130 113 aa9.33□□□□□ -0.92
SMAD3-202ENST00000439724 FAM106CPP0CH98 169 aa9.33□□□□□ -0.92
SMAD3-202ENST00000439724 CX3CL1P78423 397 aa9.33□□□□□ -0.92
SMAD3-202ENST00000439724 MORN5Q5VZ52 161 aa9.33□□□□□ -0.92
SMAD3-202ENST00000439724 Q8WTZ3 238 aa9.33□□□□□ -0.92
SMAD3-202ENST00000439724 ARPC1AQ92747 370 aa9.33□□□□□ -0.92
SMAD3-202ENST00000439724 ZNF355PQ9NSJ1 428 aa9.33□□□□□ -0.92
SMAD3-202ENST00000439724 C1RLQ9NZP8 487 aa9.33□□□□□ -0.92
SMAD3-202ENST00000439724 IGSF10Q6WRI0 2623 aa9.32□□□□□ -0.92
SMAD3-202ENST00000439724 USP24Q9UPU5 2620 aa9.32□□□□□ -0.92
SMAD3-202ENST00000439724 SMG1Q96Q15 3661 aaKnown RBP9.32□□□□□ -0.92
SMAD3-202ENST00000439724 A0A1W2PRE2 83 aa9.32□□□□□ -0.92
SMAD3-202ENST00000439724 NCBP2LA6PVI3 153 aaKnown RBP9.32□□□□□ -0.92
SMAD3-202ENST00000439724 K7EIM0 57 aa9.32□□□□□ -0.92
SMAD3-202ENST00000439724 IGLC1P0CG04 106 aa9.32□□□□□ -0.92
SMAD3-202ENST00000439724 PAX1P15863 534 aa9.32□□□□□ -0.92
SMAD3-202ENST00000439724 ZNF343Q6P1L6 599 aa9.32□□□□□ -0.92
SMAD3-202ENST00000439724 C16orf82Q7Z2V1 217 aa9.32□□□□□ -0.92
SMAD3-202ENST00000439724 C1QL4Q86Z23 238 aa9.32□□□□□ -0.92
SMAD3-202ENST00000439724 OR5AU1Q8NGC0 362 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms