RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 NARS2Q96I59 477 aaKnown RBP13.96□□□□□ -0.17
CCDC78-204ENST00000439619 KCNIP3Q9Y2W7 256 aa13.96□□□□□ -0.17
CCDC78-204ENST00000439619 PUS1Q9Y606 427 aaKnown RBP eCLIP13.96□□□□□ -0.17
CCDC78-204ENST00000439619 A0A1W2PS18 150 aa13.95□□□□□ -0.18
CCDC78-204ENST00000439619 DNASE2O00115 360 aaPredicted RBP13.95□□□□□ -0.18
CCDC78-204ENST00000439619 TMEM50AO95807 157 aa13.95□□□□□ -0.18
CCDC78-204ENST00000439619 RNASE2P10153 161 aaKnown RBP13.95□□□□□ -0.18
CCDC78-204ENST00000439619 RPL35AP18077 110 aaKnown RBP13.95□□□□□ -0.18
CCDC78-204ENST00000439619 HTR2BP41595 481 aa13.95□□□□□ -0.18
CCDC78-204ENST00000439619 RPL5P46777 297 aaKnown RBP13.95□□□□□ -0.18
CCDC78-204ENST00000439619 RPL11P62913 178 aaKnown RBP13.95□□□□□ -0.18
CCDC78-204ENST00000439619 DEFB135Q30KP9 77 aa13.95□□□□□ -0.18
CCDC78-204ENST00000439619 FAAP20Q6NZ36 180 aa13.95□□□□□ -0.18
CCDC78-204ENST00000439619 HEYLQ9NQ87 328 aaPredicted RBP13.95□□□□□ -0.18
CCDC78-204ENST00000439619 SCP2D1Q9UJQ7 156 aa13.95□□□□□ -0.18
CCDC78-204ENST00000439619 TENM2Q9NT68 2774 aa13.95□□□□□ -0.18
CCDC78-204ENST00000439619 DNAH7Q8WXX0 4024 aa13.94□□□□□ -0.18
CCDC78-204ENST00000439619 IGHV3OR16-13A0A075B7E8 117 aa13.94□□□□□ -0.18
CCDC78-204ENST00000439619 TRAV30A0A087WSZ9 112 aa13.94□□□□□ -0.18
CCDC78-204ENST00000439619 IGHV3-74A0A0B4J1X5 117 aa13.94□□□□□ -0.18
CCDC78-204ENST00000439619 NPPCP23582 126 aa13.94□□□□□ -0.18
CCDC78-204ENST00000439619 TMEM268Q5VZI3 342 aa13.94□□□□□ -0.18
CCDC78-204ENST00000439619 PVRIGQ6DKI7 326 aa13.94□□□□□ -0.18
CCDC78-204ENST00000439619 NOXA1Q86UR1 476 aa13.94□□□□□ -0.18
CCDC78-204ENST00000439619 OR4C16Q8NGL9 310 aa13.94□□□□□ -0.18
CCDC78-204ENST00000439619 DYNC2LI1Q8TCX1 351 aa13.94□□□□□ -0.18
CCDC78-204ENST00000439619 GLYATL2Q8WU03 294 aa13.94□□□□□ -0.18
CCDC78-204ENST00000439619 TMEM230Q96A57 120 aa13.94□□□□□ -0.18
CCDC78-204ENST00000439619 RTBDNQ9BSG5 229 aaPredicted RBP13.94□□□□□ -0.18
CCDC78-204ENST00000439619 CXorf65A6NEN9 183 aa13.93□□□□□ -0.18
CCDC78-204ENST00000439619 CEBPZOSA8MTT3 80 aa13.93□□□□□ -0.18
CCDC78-204ENST00000439619 CLN5O75503 358 aa13.93□□□□□ -0.18
CCDC78-204ENST00000439619 TNFRSF9Q07011 255 aa13.93□□□□□ -0.18
CCDC78-204ENST00000439619 APRG1Q8IVJ8 170 aa13.93□□□□□ -0.18
CCDC78-204ENST00000439619 GBGT1Q8N5D6 347 aa13.93□□□□□ -0.18
CCDC78-204ENST00000439619 OR51S1Q8NGJ8 323 aa13.93□□□□□ -0.18
CCDC78-204ENST00000439619 OR4X1Q8NH49 305 aa13.93□□□□□ -0.18
CCDC78-204ENST00000439619 RNF183Q96D59 192 aa13.93□□□□□ -0.18
CCDC78-204ENST00000439619 METTL26Q96S19 204 aa13.93□□□□□ -0.18
CCDC78-204ENST00000439619 VSIRQ9H7M9 311 aa13.93□□□□□ -0.18
CCDC78-204ENST00000439619 MAP6D1Q9H9H5 199 aa13.93□□□□□ -0.18
CCDC78-204ENST00000439619 GPR132Q9UNW8 380 aa13.93□□□□□ -0.18
CCDC78-204ENST00000439619 PIGBOS1A0A0B4J2F0 54 aa13.92□□□□□ -0.18
CCDC78-204ENST00000439619 A0A0G2JRQ6 117 aa13.92□□□□□ -0.18
CCDC78-204ENST00000439619 A0A0J9YWU9 116 aa13.92□□□□□ -0.18
CCDC78-204ENST00000439619 CRYM-AS1A6NIL9 109 aa13.92□□□□□ -0.18
CCDC78-204ENST00000439619 MPTX1A8MV57 137 aa13.92□□□□□ -0.18
CCDC78-204ENST00000439619 GSTZ1O43708 216 aaPredicted RBP13.92□□□□□ -0.18
CCDC78-204ENST00000439619 DFFBO76075 338 aa13.92□□□□□ -0.18
CCDC78-204ENST00000439619 AARDQ4LEZ3 155 aa13.92□□□□□ -0.18
CCDC78-204ENST00000439619 FAM90A2PQ658T7 463 aa13.92□□□□□ -0.18
CCDC78-204ENST00000439619 LYG2Q86SG7 212 aa13.92□□□□□ -0.18
CCDC78-204ENST00000439619 SELENOHQ8IZQ5 122 aaKnown RBP13.92□□□□□ -0.18
CCDC78-204ENST00000439619 ST8SIA2Q92186 375 aa13.92□□□□□ -0.18
CCDC78-204ENST00000439619 GRAMD2BQ96HH9 432 aa13.92□□□□□ -0.18
CCDC78-204ENST00000439619 CSTL1Q9H114 145 aa13.92□□□□□ -0.18
CCDC78-204ENST00000439619 MCUBQ9NWR8 336 aa13.92□□□□□ -0.18
CCDC78-204ENST00000439619 CACNG5Q9UF02 275 aa13.92□□□□□ -0.18
CCDC78-204ENST00000439619 TRAV2A0A0B4J234 112 aa13.91□□□□□ -0.18
CCDC78-204ENST00000439619 ANKRD20A5PA0PJZ0 165 aa13.91□□□□□ -0.18
CCDC78-204ENST00000439619 FABP12A6NFH5 140 aa13.91□□□□□ -0.18
CCDC78-204ENST00000439619 SLC25A4P12235 298 aa13.91□□□□□ -0.18
CCDC78-204ENST00000439619 ANXA3P12429 323 aa13.91□□□□□ -0.18
CCDC78-204ENST00000439619 EIF2B2P49770 351 aaKnown RBP13.91□□□□□ -0.18
CCDC78-204ENST00000439619 BSXQ3C1V8 233 aa13.91□□□□□ -0.18
CCDC78-204ENST00000439619 ETFRF1Q6IPR1 90 aa13.91□□□□□ -0.18
CCDC78-204ENST00000439619 Q6ZRM9 215 aa13.91□□□□□ -0.18
CCDC78-204ENST00000439619 RNASEH2CQ8TDP1 164 aaKnown RBP13.91□□□□□ -0.18
CCDC78-204ENST00000439619 IL22RA2Q969J5 263 aa13.91□□□□□ -0.18
CCDC78-204ENST00000439619 ZNF414Q96IQ9 312 aa13.91□□□□□ -0.18
CCDC78-204ENST00000439619 ZFAND3Q9H8U3 227 aa13.91□□□□□ -0.18
CCDC78-204ENST00000439619 A0A1B0GU03 582 aa13.9□□□□□ -0.18
CCDC78-204ENST00000439619 NUPR2A6NF83 97 aa13.9□□□□□ -0.18
CCDC78-204ENST00000439619 ATF4P18848 351 aaPredicted RBP13.9□□□□□ -0.18
CCDC78-204ENST00000439619 FAUP35544 74 aaKnown RBP13.9□□□□□ -0.18
CCDC78-204ENST00000439619 SLC24A4Q8NFF2 622 aa13.9□□□□□ -0.18
CCDC78-204ENST00000439619 GATAD1Q8WUU5 269 aa13.9□□□□□ -0.18
CCDC78-204ENST00000439619 GPR146Q96CH1 333 aa13.9□□□□□ -0.18
CCDC78-204ENST00000439619 MS4A6AQ9H2W1 248 aa13.9□□□□□ -0.18
CCDC78-204ENST00000439619 RABAC1Q9UI14 185 aa13.9□□□□□ -0.18
CCDC78-204ENST00000439619 TMEM56-RWDD3S4R434 201 aa13.9□□□□□ -0.18
CCDC78-204ENST00000439619 IGHV3-66A0A0C4DH42 116 aa13.89□□□□□ -0.19
CCDC78-204ENST00000439619 SULT1A3P0DMM9 295 aa13.89□□□□□ -0.19
CCDC78-204ENST00000439619 SULT1A4P0DMN0 295 aa13.89□□□□□ -0.19
CCDC78-204ENST00000439619 SRPXP78539 464 aa13.89□□□□□ -0.19
CCDC78-204ENST00000439619 PMS2P11Q13670 270 aa13.89□□□□□ -0.19
CCDC78-204ENST00000439619 C2orf83Q53S99 150 aa13.89□□□□□ -0.19
CCDC78-204ENST00000439619 MCFD2Q8NI22 146 aa13.89□□□□□ -0.19
CCDC78-204ENST00000439619 LHFPL5Q8TAF8 219 aa13.89□□□□□ -0.19
CCDC78-204ENST00000439619 Q8WTZ3 238 aa13.89□□□□□ -0.19
CCDC78-204ENST00000439619 FNDC4Q9H6D8 234 aaPredicted RBP13.89□□□□□ -0.19
CCDC78-204ENST00000439619 APOHP02749 345 aaPredicted RBP13.88□□□□□ -0.19
CCDC78-204ENST00000439619 AP3S2P59780 193 aa13.88□□□□□ -0.19
CCDC78-204ENST00000439619 OR1S2Q8NGQ3 325 aa13.88□□□□□ -0.19
CCDC78-204ENST00000439619 H3BMQ9 156 aa13.87□□□□□ -0.19
CCDC78-204ENST00000439619 AKR1C4P17516 323 aa13.87□□□□□ -0.19
CCDC78-204ENST00000439619 CRYBB3P26998 211 aa13.87□□□□□ -0.19
CCDC78-204ENST00000439619 TNFSF8P32971 234 aa13.87□□□□□ -0.19
CCDC78-204ENST00000439619 CCR6P51684 374 aa13.87□□□□□ -0.19
CCDC78-204ENST00000439619 SLIRPQ9GZT3 109 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms