RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 RNF183Q96D59 192 aa15□□□□□ -0.01
NCKIPSD-206ENST00000439518 DIRAS2Q96HU8 199 aa15□□□□□ -0.01
NCKIPSD-206ENST00000439518 BCL7BQ9BQE9 202 aa15□□□□□ -0.01
NCKIPSD-206ENST00000439518 VSIRQ9H7M9 311 aa15□□□□□ -0.01
NCKIPSD-206ENST00000439518 MAP6D1Q9H9H5 199 aa15□□□□□ -0.01
NCKIPSD-206ENST00000439518 MRPL36Q9P0J6 103 aaKnown RBP15□□□□□ -0.01
NCKIPSD-206ENST00000439518 RABL2AQ9UBK7 228 aaPredicted RBP15□□□□□ -0.01
NCKIPSD-206ENST00000439518 RABL2BQ9UNT1 228 aa15□□□□□ -0.01
NCKIPSD-206ENST00000439518 GPR132Q9UNW8 380 aa15□□□□□ -0.01
NCKIPSD-206ENST00000439518 PUS1Q9Y606 427 aaKnown RBP eCLIP15□□□□□ -0.01
NCKIPSD-206ENST00000439518 A0A1B0GU03 582 aa14.99□□□□□ -0.01
NCKIPSD-206ENST00000439518 JTBO76095 146 aa14.99□□□□□ -0.01
NCKIPSD-206ENST00000439518 APOHP02749 345 aaPredicted RBP14.99□□□□□ -0.01
NCKIPSD-206ENST00000439518 AKAIN1P0CW23 69 aa14.99□□□□□ -0.01
NCKIPSD-206ENST00000439518 RPL35AP18077 110 aaKnown RBP14.99□□□□□ -0.01
NCKIPSD-206ENST00000439518 TFPI2P48307 235 aa14.99□□□□□ -0.01
NCKIPSD-206ENST00000439518 CMC4P56277 68 aaPredicted RBP14.99□□□□□ -0.01
NCKIPSD-206ENST00000439518 SPCS3P61009 180 aa14.99□□□□□ -0.01
NCKIPSD-206ENST00000439518 TNFRSF9Q07011 255 aa14.99□□□□□ -0.01
NCKIPSD-206ENST00000439518 LILRB2Q8N423 598 aa14.99□□□□□ -0.01
NCKIPSD-206ENST00000439518 OR52E5Q8NH55 327 aa14.99□□□□□ -0.01
NCKIPSD-206ENST00000439518 RNASE11Q8TAA1 199 aaKnown RBP14.99□□□□□ -0.01
NCKIPSD-206ENST00000439518 ST8SIA2Q92186 375 aa14.99□□□□□ -0.01
NCKIPSD-206ENST00000439518 RBPMSQ93062 196 aaKnown RBP14.99□□□□□ -0.01
NCKIPSD-206ENST00000439518 ENY2Q9NPA8 101 aa14.99□□□□□ -0.01
NCKIPSD-206ENST00000439518 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.99□□□□□ -0.01
NCKIPSD-206ENST00000439518 IGKV3-7A0A075B6H7 116 aa14.98□□□□□ -0.01
NCKIPSD-206ENST00000439518 A0A0J9YWU9 116 aa14.98□□□□□ -0.01
NCKIPSD-206ENST00000439518 CRYM-AS1A6NIL9 109 aa14.98□□□□□ -0.01
NCKIPSD-206ENST00000439518 CD5P06127 495 aa14.98□□□□□ -0.01
NCKIPSD-206ENST00000439518 EWSR1Q01844 656 aaKnown RBP eCLIP14.98□□□□□ -0.01
NCKIPSD-206ENST00000439518 DHODHQ02127 395 aa14.98□□□□□ -0.01
NCKIPSD-206ENST00000439518 IL18Q14116 193 aa14.98□□□□□ -0.01
NCKIPSD-206ENST00000439518 ZNF124Q15973 351 aa14.98□□□□□ -0.01
NCKIPSD-206ENST00000439518 MLANAQ16655 118 aa14.98□□□□□ -0.01
NCKIPSD-206ENST00000439518 TCF24Q7RTU0 167 aa14.98□□□□□ -0.01
NCKIPSD-206ENST00000439518 SELENOHQ8IZQ5 122 aaKnown RBP14.98□□□□□ -0.01
NCKIPSD-206ENST00000439518 GBGT1Q8N5D6 347 aa14.98□□□□□ -0.01
NCKIPSD-206ENST00000439518 OR4X1Q8NH49 305 aa14.98□□□□□ -0.01
NCKIPSD-206ENST00000439518 ANKRD20A5PA0PJZ0 165 aa14.97□□□□□ -0.01
NCKIPSD-206ENST00000439518 GSTZ1O43708 216 aaPredicted RBP14.97□□□□□ -0.01
NCKIPSD-206ENST00000439518 CLN5O75503 358 aa14.97□□□□□ -0.01
NCKIPSD-206ENST00000439518 LYG2Q86SG7 212 aa14.97□□□□□ -0.01
NCKIPSD-206ENST00000439518 OR51S1Q8NGJ8 323 aa14.97□□□□□ -0.01
NCKIPSD-206ENST00000439518 PRRT1Q99946 306 aa14.97□□□□□ -0.01
NCKIPSD-206ENST00000439518 C6orf62Q9GZU0 229 aaPredicted RBP14.97□□□□□ -0.01
NCKIPSD-206ENST00000439518 DFFBO76075 338 aa14.96□□□□□ -0.01
NCKIPSD-206ENST00000439518 OPRK1P41145 380 aa14.96□□□□□ -0.01
NCKIPSD-206ENST00000439518 PAFAH1B2P68402 229 aa14.96□□□□□ -0.01
NCKIPSD-206ENST00000439518 TMEM268Q5VZI3 342 aa14.96□□□□□ -0.01
NCKIPSD-206ENST00000439518 GPR146Q96CH1 333 aa14.96□□□□□ -0.01
NCKIPSD-206ENST00000439518 SOSTQ9BQB4 213 aa14.96□□□□□ -0.01
NCKIPSD-206ENST00000439518 SLIRPQ9GZT3 109 aaKnown RBP14.96□□□□□ -0.01
NCKIPSD-206ENST00000439518 CACNG5Q9UF02 275 aa14.96□□□□□ -0.01
NCKIPSD-206ENST00000439518 TMEM56-RWDD3S4R434 201 aa14.96□□□□□ -0.01
NCKIPSD-206ENST00000439518 IGKV1-17P01599 117 aa14.95□□□□□ -0.02
NCKIPSD-206ENST00000439518 ATF4P18848 351 aaPredicted RBP14.95□□□□□ -0.02
NCKIPSD-206ENST00000439518 HTR2BP41595 481 aa14.95□□□□□ -0.02
NCKIPSD-206ENST00000439518 CSTL1Q9H114 145 aa14.95□□□□□ -0.02
NCKIPSD-206ENST00000439518 MS4A6AQ9H2W1 248 aa14.95□□□□□ -0.02
NCKIPSD-206ENST00000439518 RSL24D1Q9UHA3 163 aaKnown RBP14.95□□□□□ -0.02
NCKIPSD-206ENST00000439518 TRAV2A0A0B4J234 112 aa14.94□□□□□ -0.02
NCKIPSD-206ENST00000439518 IGHV3-66A0A0C4DH42 116 aa14.94□□□□□ -0.02
NCKIPSD-206ENST00000439518 C2orf83Q53S99 150 aa14.94□□□□□ -0.02
NCKIPSD-206ENST00000439518 TMEM230Q96A57 120 aa14.94□□□□□ -0.02
NCKIPSD-206ENST00000439518 HEYLQ9NQ87 328 aaPredicted RBP14.94□□□□□ -0.02
NCKIPSD-206ENST00000439518 MPTX1A8MV57 137 aa14.93□□□□□ -0.02
NCKIPSD-206ENST00000439518 H3BMQ9 156 aa14.93□□□□□ -0.02
NCKIPSD-206ENST00000439518 NPPCP23582 126 aa14.93□□□□□ -0.02
NCKIPSD-206ENST00000439518 CRYBB3P26998 211 aa14.93□□□□□ -0.02
NCKIPSD-206ENST00000439518 TNFSF8P32971 234 aa14.93□□□□□ -0.02
NCKIPSD-206ENST00000439518 IL22RA2Q969J5 263 aa14.93□□□□□ -0.02
NCKIPSD-206ENST00000439518 TMEM231Q9H6L2 316 aa14.93□□□□□ -0.02
NCKIPSD-206ENST00000439518 RPS10-NUDT3A0A1W2PQS6 291 aa14.92□□□□□ -0.02
NCKIPSD-206ENST00000439518 CXorf65A6NEN9 183 aa14.92□□□□□ -0.02
NCKIPSD-206ENST00000439518 TMEM187Q14656 261 aa14.92□□□□□ -0.02
NCKIPSD-206ENST00000439518 TIGITQ495A1 244 aa14.92□□□□□ -0.02
NCKIPSD-206ENST00000439518 RNASEH2CQ8TDP1 164 aaKnown RBP14.92□□□□□ -0.02
NCKIPSD-206ENST00000439518 TMEM170AQ8WVE7 144 aa14.92□□□□□ -0.02
NCKIPSD-206ENST00000439518 METTL26Q96S19 204 aa14.92□□□□□ -0.02
NCKIPSD-206ENST00000439518 SCP2D1Q9UJQ7 156 aa14.92□□□□□ -0.02
NCKIPSD-206ENST00000439518 PLECQ15149 4684 aaKnown RBP14.92□□□□□ -0.02
NCKIPSD-206ENST00000439518 TRAV30A0A087WSZ9 112 aa14.91□□□□□ -0.02
NCKIPSD-206ENST00000439518 A0A1W2PS18 150 aa14.91□□□□□ -0.02
NCKIPSD-206ENST00000439518 DNASE2O00115 360 aaPredicted RBP14.91□□□□□ -0.02
NCKIPSD-206ENST00000439518 SCGB2A1O75556 95 aa14.91□□□□□ -0.02
NCKIPSD-206ENST00000439518 IGLC1P0CG04 106 aa14.91□□□□□ -0.02
NCKIPSD-206ENST00000439518 PMS2P11Q13670 270 aa14.91□□□□□ -0.02
NCKIPSD-206ENST00000439518 NMSQ5H8A3 153 aa14.91□□□□□ -0.02
NCKIPSD-206ENST00000439518 PRSS54Q6PEW0 395 aa14.91□□□□□ -0.02
NCKIPSD-206ENST00000439518 FAM24BQ8N5W8 94 aa14.91□□□□□ -0.02
NCKIPSD-206ENST00000439518 PRR13Q9NZ81 148 aa14.91□□□□□ -0.02
NCKIPSD-206ENST00000439518 KCNIP3Q9Y2W7 256 aa14.91□□□□□ -0.02
NCKIPSD-206ENST00000439518 FABP12A6NFH5 140 aa14.9□□□□□ -0.02
NCKIPSD-206ENST00000439518 CEBPZOSA8MTT3 80 aa14.9□□□□□ -0.02
NCKIPSD-206ENST00000439518 SULT1A3P0DMM9 295 aa14.9□□□□□ -0.02
NCKIPSD-206ENST00000439518 SULT1A4P0DMN0 295 aa14.9□□□□□ -0.02
NCKIPSD-206ENST00000439518 SLC25A4P12235 298 aa14.9□□□□□ -0.02
NCKIPSD-206ENST00000439518 DEFB131AP59861 70 aa14.9□□□□□ -0.02
NCKIPSD-206ENST00000439518 RPL11P62913 178 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms