RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ADAMTS20P59510 1910 aa8.18□□□□□ -1.1
CDC42SE1-202ENST00000439374 TNRC6AQ8NDV7 1962 aaKnown RBP8.18□□□□□ -1.1
CDC42SE1-202ENST00000439374 PRR33A8MZF0 331 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 CXorf1O96002 111 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 IGLL1P15814 213 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 EFNB3Q15768 340 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 PGLYRP4Q96LB8 373 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 CHRDL1Q9BU40 450 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 GGTLC1Q9BX51 225 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 CDC42EP3Q9UKI2 254 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 F11RQ9Y624 299 aaKnown RBP8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 COL5A1P20908 1838 aaPredicted RBP8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 IQCF6A8MYZ5 107 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 SAP30O75446 220 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 RAB31Q13636 194 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 LINC00596Q86U02 117 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 OR10W1Q8NGF6 305 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 SPENQ96T58 3664 aaKnown RBP8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 KCNIP2Q9NS61 270 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 TMEM140Q9NV12 185 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 HSPB7Q9UBY9 170 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 VENTXO95231 258 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 ZNF146Q15072 292 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 TEX43Q6ZNM6 134 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 C19orf35Q6ZS72 473 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 ZNF835Q9Y2P0 537 aa8.17□□□□□ -1.1
CDC42SE1-202ENST00000439374 RHOBP62745 196 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 MSMPQ1L6U9 139 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 KLHDC1Q8N7A1 406 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 OR52E5Q8NH55 327 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 TSKUQ8WUA8 353 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 KCNS1Q96KK3 526 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 C20orf144Q9BQM9 153 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 OR4C46A6NHA9 309 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 HSBP1L1C9JCN9 74 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 LINC00614P0C842 121 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 NPY1RP25929 384 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 PDLIM4P50479 330 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 RPL24P83731 157 aaKnown RBP8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 MTURNQ8N3F0 131 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 TCF19Q9Y242 345 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 CACNA1AO00555 2505 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 PCSK5Q92824 1860 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 SS18L1O75177 396 aaPredicted RBP8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 C10orf55Q5SWW7 151 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 C11orf53Q8IXP5 236 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 OR8A1Q8NGG7 326 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 DYNLRB1Q9NP97 96 aa8.16□□□□□ -1.1
CDC42SE1-202ENST00000439374 DOPEY2Q9Y3R5 2298 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 IGKV1D-17A0A075B6S4 117 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 SERTM2A0A1B0GWG4 89 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 MT-CO2P00403 227 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 TNFSF4P23510 183 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 RBX1P62877 108 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 VWC2Q2TAL6 325 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 MORN5Q5VZ52 161 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 TEPPQ6URK8 271 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 NABP2Q9BQ15 211 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 CALYQ9NYX4 217 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 TRGV10A0A0A0MS01 117 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 MOSP00540 346 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 ZNF134P52741 427 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 BRWD1-AS2P59051 145 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 ERVK11-1P61568 191 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 RPL19P84098 196 aaKnown RBP8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 PLA2G2CQ5R387 149 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 TMEM144Q7Z5S9 345 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 GCSAMQ8N6F7 178 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 MEGF9Q9H1U4 602 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 WDR83OSQ9Y284 106 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 S4R3C0 116 aa8.15□□□□□ -1.1
CDC42SE1-202ENST00000439374 KMT2EQ8IZD2 1858 aa8.15□□□□□ -1.11
CDC42SE1-202ENST00000439374 TRAV8-1A0A0A6YYK1 113 aa8.15□□□□□ -1.11
CDC42SE1-202ENST00000439374 CCL3L1P16619 93 aa8.15□□□□□ -1.11
CDC42SE1-202ENST00000439374 FOXL1Q12952 345 aa8.15□□□□□ -1.11
CDC42SE1-202ENST00000439374 UBE2V1Q13404 147 aa8.15□□□□□ -1.11
CDC42SE1-202ENST00000439374 SLC35E4Q6ICL7 350 aa8.15□□□□□ -1.11
CDC42SE1-202ENST00000439374 EBLN2Q6P2I7 272 aa8.15□□□□□ -1.11
CDC42SE1-202ENST00000439374 Q8NFD4 153 aa8.15□□□□□ -1.11
CDC42SE1-202ENST00000439374 UBE2G1P62253 170 aa8.14□□□□□ -1.11
CDC42SE1-202ENST00000439374 FOXC1Q12948 553 aa8.14□□□□□ -1.11
CDC42SE1-202ENST00000439374 HCP5Q6MZN7 132 aa8.14□□□□□ -1.11
CDC42SE1-202ENST00000439374 ZNF474Q6S9Z5 364 aaPredicted RBP8.14□□□□□ -1.11
CDC42SE1-202ENST00000439374 TEX45Q8NA69 505 aa8.14□□□□□ -1.11
CDC42SE1-202ENST00000439374 COX11Q9Y6N1 276 aa8.14□□□□□ -1.11
CDC42SE1-202ENST00000439374 COL12A1Q99715 3063 aa8.14□□□□□ -1.11
CDC42SE1-202ENST00000439374 ZZEF1O43149 2961 aa8.14□□□□□ -1.11
CDC42SE1-202ENST00000439374 HIGD1CA8MV81 97 aa8.14□□□□□ -1.11
CDC42SE1-202ENST00000439374 TYMSP04818 313 aa8.14□□□□□ -1.11
CDC42SE1-202ENST00000439374 C22orf34Q6ZV56 151 aa8.14□□□□□ -1.11
CDC42SE1-202ENST00000439374 GSX1Q9H4S2 264 aaPredicted RBP8.14□□□□□ -1.11
CDC42SE1-202ENST00000439374 RELNP78509 3460 aa8.14□□□□□ -1.11
CDC42SE1-202ENST00000439374 SLC25A5P05141 298 aaKnown RBP8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 PRSS57Q6UWY2 283 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 Q6ZS49 121 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 WFDC12Q8WWY7 111 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 NEUROG1Q92886 237 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 MBNL3Q9NUK0 354 aaKnown RBP8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 LOC105371242A0A075B767 164 aa8.13□□□□□ -1.11
CDC42SE1-202ENST00000439374 PIGBOS1A0A0B4J2F0 54 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms