RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 DLL1O00548 723 aa12.45□□□□□ -0.42
APP-208ENST00000439274 TNFSF4P23510 183 aa12.45□□□□□ -0.42
APP-208ENST00000439274 AMTP48728 403 aa12.45□□□□□ -0.42
APP-208ENST00000439274 CASP6P55212 293 aa12.45□□□□□ -0.42
APP-208ENST00000439274 RPL8P62917 257 aaKnown RBP12.45□□□□□ -0.42
APP-208ENST00000439274 C1orf185Q5T7R7 199 aa12.45□□□□□ -0.42
APP-208ENST00000439274 WDR73Q6P4I2 378 aa12.45□□□□□ -0.42
APP-208ENST00000439274 IGF2-ASQ6U949 168 aa12.45□□□□□ -0.42
APP-208ENST00000439274 Q8N976 141 aa12.45□□□□□ -0.42
APP-208ENST00000439274 FNDC4Q9H6D8 234 aaPredicted RBP12.45□□□□□ -0.42
APP-208ENST00000439274 CDC42EP3Q9UKI2 254 aa12.45□□□□□ -0.42
APP-208ENST00000439274 ZFHX2Q9C0A1 2572 aaPredicted RBP12.45□□□□□ -0.42
APP-208ENST00000439274 SMIM27A0A1W2PRY6 76 aa12.45□□□□□ -0.42
APP-208ENST00000439274 A0A1W2PS18 150 aa12.45□□□□□ -0.42
APP-208ENST00000439274 ZNF253O75346 499 aa12.45□□□□□ -0.42
APP-208ENST00000439274 MT-ND6P03923 174 aa12.45□□□□□ -0.42
APP-208ENST00000439274 AMY1AP04745 511 aa12.45□□□□□ -0.42
APP-208ENST00000439274 WT1-ASQ06250 92 aa12.45□□□□□ -0.42
APP-208ENST00000439274 PNKDQ8N490 385 aa12.45□□□□□ -0.42
APP-208ENST00000439274 DNAJC4Q9NNZ3 241 aa12.45□□□□□ -0.42
APP-208ENST00000439274 NRN1Q9NPD7 142 aa12.45□□□□□ -0.42
APP-208ENST00000439274 LINC00312Q9Y6C7 94 aa12.45□□□□□ -0.42
APP-208ENST00000439274 CGB1A6NKQ9 187 aa12.44□□□□□ -0.42
APP-208ENST00000439274 K7EM74 188 aa12.44□□□□□ -0.42
APP-208ENST00000439274 CEACAM4O75871 244 aa12.44□□□□□ -0.42
APP-208ENST00000439274 PLAUP00749 431 aa12.44□□□□□ -0.42
APP-208ENST00000439274 APOA2P02652 100 aa12.44□□□□□ -0.42
APP-208ENST00000439274 TEX36Q5VZQ5 186 aa12.44□□□□□ -0.42
APP-208ENST00000439274 LHFPL4Q7Z7J7 247 aa12.44□□□□□ -0.42
APP-208ENST00000439274 OSR1Q8TAX0 266 aaPredicted RBP12.44□□□□□ -0.42
APP-208ENST00000439274 C19orf24Q9BVV8 132 aa12.44□□□□□ -0.42
APP-208ENST00000439274 ZNF355PQ9NSJ1 428 aa12.44□□□□□ -0.42
APP-208ENST00000439274 MRPL36Q9P0J6 103 aaKnown RBP12.44□□□□□ -0.42
APP-208ENST00000439274 KALRNO60229 2985 aa12.44□□□□□ -0.42
APP-208ENST00000439274 DMXL2Q8TDJ6 3036 aa12.44□□□□□ -0.42
APP-208ENST00000439274 DIRC3C9JPN6 131 aa12.44□□□□□ -0.42
APP-208ENST00000439274 PLXNB1O43157 2135 aa12.44□□□□□ -0.42
APP-208ENST00000439274 ZNF25P17030 456 aaPredicted RBP12.44□□□□□ -0.42
APP-208ENST00000439274 ERHP84090 104 aaKnown RBP12.44□□□□□ -0.42
APP-208ENST00000439274 PATE2Q6UY27 113 aa12.44□□□□□ -0.42
APP-208ENST00000439274 FAM19A2Q8N3H0 131 aa12.44□□□□□ -0.42
APP-208ENST00000439274 NPIPB3Q92617 1050 aa12.44□□□□□ -0.42
APP-208ENST00000439274 KCNS1Q96KK3 526 aa12.44□□□□□ -0.42
APP-208ENST00000439274 ZNF586Q9NXT0 402 aa12.44□□□□□ -0.42
APP-208ENST00000439274 ADGRG4Q8IZF6 3080 aa12.43□□□□□ -0.42
APP-208ENST00000439274 COX7A2P2O60397 106 aa12.43□□□□□ -0.42
APP-208ENST00000439274 REG1AP05451 166 aa12.43□□□□□ -0.42
APP-208ENST00000439274 SLAQ13239 276 aa12.43□□□□□ -0.42
APP-208ENST00000439274 BATFQ16520 125 aa12.43□□□□□ -0.42
APP-208ENST00000439274 PRR31Q5SQ13 230 aa12.43□□□□□ -0.42
APP-208ENST00000439274 FLYWCH2Q96CP2 140 aaKnown RBP12.43□□□□□ -0.42
APP-208ENST00000439274 MRPL32Q9BYC8 188 aaKnown RBP12.43□□□□□ -0.42
APP-208ENST00000439274 C3orf36Q3SXR2 165 aa12.43□□□□□ -0.42
APP-208ENST00000439274 OR10J3Q5JRS4 329 aa12.43□□□□□ -0.42
APP-208ENST00000439274 TMEM200BQ69YZ2 307 aa12.43□□□□□ -0.42
APP-208ENST00000439274 AMMECR1Q9Y4X0 333 aaPredicted RBP12.43□□□□□ -0.42
APP-208ENST00000439274 NKX6-3A6NJ46 265 aa12.42□□□□□ -0.42
APP-208ENST00000439274 USF1P22415 310 aaPredicted RBP12.42□□□□□ -0.42
APP-208ENST00000439274 ATP5IP56385 69 aaPredicted RBP12.42□□□□□ -0.42
APP-208ENST00000439274 RPL19P84098 196 aaKnown RBP12.42□□□□□ -0.42
APP-208ENST00000439274 RUSC1-AS1Q66K80 236 aa12.42□□□□□ -0.42
APP-208ENST00000439274 PRR27Q6MZM9 219 aa12.42□□□□□ -0.42
APP-208ENST00000439274 OR5AN1Q8NGI8 311 aa12.42□□□□□ -0.42
APP-208ENST00000439274 H1FXQ92522 213 aaKnown RBP12.42□□□□□ -0.42
APP-208ENST00000439274 SGK494Q96LW2 274 aa12.42□□□□□ -0.42
APP-208ENST00000439274 ZNF714Q96N38 554 aa12.42□□□□□ -0.42
APP-208ENST00000439274 PAXXQ9BUH6 204 aa12.42□□□□□ -0.42
APP-208ENST00000439274 GAL3ST2Q9H3Q3 398 aa12.42□□□□□ -0.42
APP-208ENST00000439274 IGKV1D-37A0A075B6S9 117 aa12.42□□□□□ -0.42
APP-208ENST00000439274 IZUMO1RA6ND01 250 aa12.42□□□□□ -0.42
APP-208ENST00000439274 APCSP02743 223 aa12.42□□□□□ -0.42
APP-208ENST00000439274 GNG5P63218 68 aa12.42□□□□□ -0.42
APP-208ENST00000439274 C10orf113Q5VZT2 155 aa12.42□□□□□ -0.42
APP-208ENST00000439274 ZNF329Q86UD4 541 aa12.42□□□□□ -0.42
APP-208ENST00000439274 CACNG8Q8WXS5 425 aa12.42□□□□□ -0.42
APP-208ENST00000439274 TPSG1Q9NRR2 321 aa12.42□□□□□ -0.42
APP-208ENST00000439274 PKDREJQ9NTG1 2253 aa12.41□□□□□ -0.42
APP-208ENST00000439274 HLA-DQA1P01909 254 aa12.41□□□□□ -0.42
APP-208ENST00000439274 TMEM177Q53S58 311 aa12.41□□□□□ -0.42
APP-208ENST00000439274 OR10X1Q8NGY0 326 aa12.41□□□□□ -0.42
APP-208ENST00000439274 RITA1Q96K30 269 aa12.41□□□□□ -0.42
APP-208ENST00000439274 ZNF430Q9H8G1 570 aaPredicted RBP12.41□□□□□ -0.42
APP-208ENST00000439274 ZNF324O75467 553 aaPredicted RBP12.41□□□□□ -0.42
APP-208ENST00000439274 RPLP1P05386 114 aaKnown RBP12.41□□□□□ -0.42
APP-208ENST00000439274 TMEM30BQ3MIR4 351 aa12.41□□□□□ -0.42
APP-208ENST00000439274 GDF5OSQ5U4N7 250 aa12.41□□□□□ -0.42
APP-208ENST00000439274 CYB5R2Q6BCY4 276 aa12.41□□□□□ -0.42
APP-208ENST00000439274 LYPD2Q6UXB3 125 aa12.41□□□□□ -0.42
APP-208ENST00000439274 NIT1Q86X76 327 aa12.41□□□□□ -0.42
APP-208ENST00000439274 WFDC8Q8IUA0 241 aa12.41□□□□□ -0.42
APP-208ENST00000439274 TMEM68Q96MH6 324 aa12.41□□□□□ -0.42
APP-208ENST00000439274 BSNQ9UPA5 3926 aa12.4□□□□□ -0.42
APP-208ENST00000439274 GVINP1Q7Z2Y8 2422 aa12.4□□□□□ -0.42
APP-208ENST00000439274 AKAP13Q12802 2813 aa12.4□□□□□ -0.42
APP-208ENST00000439274 PEX7O00628 323 aa12.4□□□□□ -0.42
APP-208ENST00000439274 NTF3P20783 257 aa12.4□□□□□ -0.42
APP-208ENST00000439274 C19orf35Q6ZS72 473 aa12.4□□□□□ -0.42
APP-208ENST00000439274 TSKUQ8WUA8 353 aa12.4□□□□□ -0.42
APP-208ENST00000439274 ZNF331Q9NQX6 463 aaPredicted RBP12.4□□□□□ -0.42
APP-208ENST00000439274 ATMQ13315 3056 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms