RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 ACACAQ13085 2346 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 IGF2RP11717 2491 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 IZUMO1RA6ND01 250 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 C2orf70A6NJV1 201 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 C15orf61A6NNL5 157 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 PYYP10082 97 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 CA7P43166 264 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 FOXA3P55318 350 aaPredicted RBP11.07□□□□□ -0.64
PCNX3-202ENST00000439247 SAPCD1Q5SSQ6 148 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 TRAT1Q6PIZ9 186 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 FAM90A1Q86YD7 464 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 NUP35Q8NFH5 326 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 LRRC29Q8WV35 223 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 OR8B2Q96RD0 313 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 SCNM1Q9BWG6 230 aa11.07□□□□□ -0.64
PCNX3-202ENST00000439247 IGHV2-70DA0A0C4DH43 119 aa11.06□□□□□ -0.64
PCNX3-202ENST00000439247 TNFSF4P23510 183 aa11.06□□□□□ -0.64
PCNX3-202ENST00000439247 CDKN1BP46527 198 aa11.06□□□□□ -0.64
PCNX3-202ENST00000439247 PPOXP50336 477 aa11.06□□□□□ -0.64
PCNX3-202ENST00000439247 RAB31Q13636 194 aa11.06□□□□□ -0.64
PCNX3-202ENST00000439247 TIMM8AO60220 97 aaPredicted RBP11.06□□□□□ -0.64
PCNX3-202ENST00000439247 PRDX2P32119 198 aa11.06□□□□□ -0.64
PCNX3-202ENST00000439247 SSBP2P81877 361 aaPredicted RBP11.06□□□□□ -0.64
PCNX3-202ENST00000439247 FAM201AQ5SY85 155 aa11.06□□□□□ -0.64
PCNX3-202ENST00000439247 IGF2-ASQ6U949 168 aa11.06□□□□□ -0.64
PCNX3-202ENST00000439247 URB1-AS1Q96HZ7 61 aa11.06□□□□□ -0.64
PCNX3-202ENST00000439247 CBY3A6NI87 242 aa11.05□□□□□ -0.64
PCNX3-202ENST00000439247 H0YJW9 148 aa11.05□□□□□ -0.64
PCNX3-202ENST00000439247 K7EP13 123 aa11.05□□□□□ -0.64
PCNX3-202ENST00000439247 CD46P15529 392 aa11.05□□□□□ -0.64
PCNX3-202ENST00000439247 MEOX1P50221 254 aa11.05□□□□□ -0.64
PCNX3-202ENST00000439247 LOXL3P58215 753 aa11.05□□□□□ -0.64
PCNX3-202ENST00000439247 UBE2G1P62253 170 aa11.05□□□□□ -0.64
PCNX3-202ENST00000439247 MRPL49Q13405 166 aaKnown RBP11.05□□□□□ -0.64
PCNX3-202ENST00000439247 RNFT1Q5M7Z0 435 aa11.05□□□□□ -0.64
PCNX3-202ENST00000439247 SNRNP40Q96DI7 357 aaKnown RBP11.05□□□□□ -0.64
PCNX3-202ENST00000439247 OR2T8A6NH00 312 aa11.05□□□□□ -0.64
PCNX3-202ENST00000439247 H0Y8G0 127 aa11.05□□□□□ -0.64
PCNX3-202ENST00000439247 ADH4P08319 380 aa11.05□□□□□ -0.64
PCNX3-202ENST00000439247 GABRA6Q16445 453 aa11.05□□□□□ -0.64
PCNX3-202ENST00000439247 MUC15Q8N387 334 aa11.05□□□□□ -0.64
PCNX3-202ENST00000439247 OR10W1Q8NGF6 305 aa11.05□□□□□ -0.64
PCNX3-202ENST00000439247 OR8B3Q8NGG8 313 aa11.05□□□□□ -0.64
PCNX3-202ENST00000439247 ENY2Q9NPA8 101 aa11.05□□□□□ -0.64
PCNX3-202ENST00000439247 TMEM167BQ9NRX6 74 aa11.05□□□□□ -0.64
PCNX3-202ENST00000439247 IDI2-AS1Q9NZ38 188 aa11.05□□□□□ -0.64
PCNX3-202ENST00000439247 NCOR2Q9Y618 2525 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 IGKV1D-17A0A075B6S4 117 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 IGHV1-69-2A0A0G2JMI3 117 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 PSG1P11464 419 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 HSPE1P61604 102 aaKnown RBP11.04□□□□□ -0.64
PCNX3-202ENST00000439247 GNG5P63218 68 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 FOXE3Q13461 319 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 LDLRAD2Q5SZI1 272 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 DUX4L9Q6RFH8 374 aaPredicted RBP11.04□□□□□ -0.64
PCNX3-202ENST00000439247 CLEC2AQ6UVW9 174 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 OR2T6Q8NHC8 308 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 SPRR3Q9UBC9 169 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 KLF13Q9Y2Y9 288 aaPredicted RBP11.04□□□□□ -0.64
PCNX3-202ENST00000439247 WASHC3Q9Y3C0 194 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 TIMM8BQ9Y5J9 83 aaPredicted RBP11.04□□□□□ -0.64
PCNX3-202ENST00000439247 KALRNO60229 2985 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 CACNA1GO43497 2377 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 NAV3Q8IVL0 2385 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 ITGB1BP1O14713 200 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 PLXNB1O43157 2135 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 PLAUP00749 431 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 RPL19P84098 196 aaKnown RBP11.04□□□□□ -0.64
PCNX3-202ENST00000439247 NUDT10Q8NFP7 164 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 OR2D3Q8NGH3 330 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 NUDT11Q96G61 164 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 ARL2-SNX15V9GYD0 113 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 REG1AP05451 166 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 SAA2P0DJI9 122 aaPredicted RBP11.04□□□□□ -0.64
PCNX3-202ENST00000439247 PRB4P10163 310 aaPredicted RBP11.04□□□□□ -0.64
PCNX3-202ENST00000439247 CCL11P51671 97 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 TBR1Q16650 682 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 SMIM21Q3B7S5 101 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 DDB2Q92466 427 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 FER1L6-AS2Q96M78 137 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 PMCHL2Q9BQD1 86 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 CXXC4Q9H2H0 198 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 OR51B2Q9Y5P1 312 aa11.04□□□□□ -0.64
PCNX3-202ENST00000439247 CHD8Q9HCK8 2581 aa11.03□□□□□ -0.64
PCNX3-202ENST00000439247 TRGV8A0A0C4DH27 118 aa11.03□□□□□ -0.64
PCNX3-202ENST00000439247 NUDT3O95989 172 aa11.03□□□□□ -0.64
PCNX3-202ENST00000439247 CT45A1Q5HYN5 189 aa11.03□□□□□ -0.64
PCNX3-202ENST00000439247 ZNF841Q6ZN19 808 aa11.03□□□□□ -0.64
PCNX3-202ENST00000439247 TCF24Q7RTU0 167 aa11.03□□□□□ -0.64
PCNX3-202ENST00000439247 CT45A3Q8NHU0 189 aa11.03□□□□□ -0.64
PCNX3-202ENST00000439247 TMEM14BQ9NUH8 114 aa11.03□□□□□ -0.64
PCNX3-202ENST00000439247 OR4C46A6NHA9 309 aa11.03□□□□□ -0.64
PCNX3-202ENST00000439247 HIGD1CA8MV81 97 aa11.03□□□□□ -0.64
PCNX3-202ENST00000439247 IGKV1-16P04430 117 aa11.03□□□□□ -0.64
PCNX3-202ENST00000439247 ZNF138P52744 262 aa11.03□□□□□ -0.64
PCNX3-202ENST00000439247 UBE2L3P68036 154 aaKnown RBP11.03□□□□□ -0.64
PCNX3-202ENST00000439247 TANC2Q9HCD6 1990 aa11.03□□□□□ -0.64
PCNX3-202ENST00000439247 SLC25A10Q9UBX3 287 aaPredicted RBP11.03□□□□□ -0.64
PCNX3-202ENST00000439247 PIEZO2Q9H5I5 2752 aa11.03□□□□□ -0.64
PCNX3-202ENST00000439247 MUC21A0A0G2JKD1 596 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms