RNA–Protein interactions for RNA: ENST00000439185.1

UPP2-IT1-201, UPP2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene UPP2-IT1, Length 357 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPP2-IT1-201ENST00000439185 COMMD5Q9GZQ3 224 aa0.3□□□□□ -2.36
UPP2-IT1-201ENST00000439185 RASL12Q9NYN1 266 aa0.3□□□□□ -2.36
UPP2-IT1-201ENST00000439185 ERGIC3Q9Y282 383 aa0.3□□□□□ -2.36
UPP2-IT1-201ENST00000439185 ATP6V1DQ9Y5K8 247 aa0.3□□□□□ -2.36
UPP2-IT1-201ENST00000439185 DENND4CQ5VZ89 1909 aa0.3□□□□□ -2.36
UPP2-IT1-201ENST00000439185 MAP3K5Q99683 1374 aa0.3□□□□□ -2.36
UPP2-IT1-201ENST00000439185 BUB1B-PAK6H3BSN5 160 aa0.29□□□□□ -2.36
UPP2-IT1-201ENST00000439185 SULT1B1O43704 296 aa0.29□□□□□ -2.36
UPP2-IT1-201ENST00000439185 SNRPD2P62316 118 aaKnown RBP0.29□□□□□ -2.36
UPP2-IT1-201ENST00000439185 HIST3H3Q16695 136 aa0.29□□□□□ -2.36
UPP2-IT1-201ENST00000439185 HIST2H3PS2Q5TEC6 136 aa0.29□□□□□ -2.36
UPP2-IT1-201ENST00000439185 SOSTDC1Q6X4U4 206 aa0.29□□□□□ -2.36
UPP2-IT1-201ENST00000439185 TMEM86BQ8N661 226 aa0.29□□□□□ -2.36
UPP2-IT1-201ENST00000439185 BORCS5Q969J3 196 aa0.29□□□□□ -2.36
UPP2-IT1-201ENST00000439185 OR52E6Q96RD3 313 aa0.29□□□□□ -2.36
UPP2-IT1-201ENST00000439185 TMEM70Q9BUB7 260 aa0.29□□□□□ -2.36
UPP2-IT1-201ENST00000439185 C11orf68Q9H3H3 251 aaKnown RBP0.29□□□□□ -2.36
UPP2-IT1-201ENST00000439185 SLC39A9Q9NUM3 307 aa0.29□□□□□ -2.36
UPP2-IT1-201ENST00000439185 NKIRAS1Q9NYS0 192 aa0.29□□□□□ -2.36
UPP2-IT1-201ENST00000439185 HS3ST2Q9Y278 367 aa0.29□□□□□ -2.36
UPP2-IT1-201ENST00000439185 ZNF462Q96JM2 2506 aa0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 E9PCH4 1651 aa0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 TRAV9-1A0A075B6T8 112 aa0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 EXOC1LA0A1B0GW35 172 aa0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 A0A1W2PPM0 123 aa0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 PQLC2LA1A4F0 135 aa0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 PSMD12O00232 456 aaPredicted RBP0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 TGOLN2O43493 480 aa0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 PROSCO94903 275 aa0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 TPM3P06753 285 aa0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 MGST1P10620 155 aaKnown RBP0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 ZNF25P17030 456 aaPredicted RBP0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 HIST1H1TP22492 207 aaPredicted RBP0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 CDC42P60953 191 aa0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 PSME3P61289 254 aa0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 MPV17LQ2QL34 196 aa0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 OR10J5Q8NHC4 309 aa0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 LLPHQ9BRT6 129 aaKnown RBP0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 CDC42SE1Q9NRR8 79 aa0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 TMEM56-RWDD3S4R434 201 aa0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 SBF1O95248 1867 aa0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 NUP155O75694 1391 aa0.28□□□□□ -2.36
UPP2-IT1-201ENST00000439185 DOCK3Q8IZD9 2030 aa0.27□□□□□ -2.37
UPP2-IT1-201ENST00000439185 ZNF736B4DX44 427 aaPredicted RBP0.27□□□□□ -2.37
UPP2-IT1-201ENST00000439185 FAAHO00519 579 aa0.27□□□□□ -2.37
UPP2-IT1-201ENST00000439185 NCR3O14931 201 aa0.27□□□□□ -2.37
UPP2-IT1-201ENST00000439185 CALB1P05937 261 aa0.27□□□□□ -2.37
UPP2-IT1-201ENST00000439185 CD79AP11912 226 aa0.27□□□□□ -2.37
UPP2-IT1-201ENST00000439185 SPCS3P61009 180 aa0.27□□□□□ -2.37
UPP2-IT1-201ENST00000439185 OR2F1Q13607 317 aa0.27□□□□□ -2.37
UPP2-IT1-201ENST00000439185 C3orf56Q8N813 242 aa0.27□□□□□ -2.37
UPP2-IT1-201ENST00000439185 C4orf3Q8WVX3 66 aa0.27□□□□□ -2.37
UPP2-IT1-201ENST00000439185 GPR146Q96CH1 333 aa0.27□□□□□ -2.37
UPP2-IT1-201ENST00000439185 NHP2Q9NX24 153 aaKnown RBP0.27□□□□□ -2.37
UPP2-IT1-201ENST00000439185 MTUS2Q5JR59 1369 aa0.27□□□□□ -2.37
UPP2-IT1-201ENST00000439185 COL1A1P02452 1464 aaPredicted RBP0.27□□□□□ -2.37
UPP2-IT1-201ENST00000439185 MUC5ACP98088 5654 aa0.26□□□□□ -2.37
UPP2-IT1-201ENST00000439185 OR2J2O76002 312 aa0.26□□□□□ -2.37
UPP2-IT1-201ENST00000439185 HIST1H1EP10412 219 aaKnown RBP0.26□□□□□ -2.37
UPP2-IT1-201ENST00000439185 RPL5P46777 297 aaKnown RBP0.26□□□□□ -2.37
UPP2-IT1-201ENST00000439185 MAGOHP61326 146 aaKnown RBP0.26□□□□□ -2.37
UPP2-IT1-201ENST00000439185 SRSF6Q13247 344 aaKnown RBP0.26□□□□□ -2.37
UPP2-IT1-201ENST00000439185 DEFB113Q30KQ7 82 aa0.26□□□□□ -2.37
UPP2-IT1-201ENST00000439185 TEX261Q6UWH6 196 aa0.26□□□□□ -2.37
UPP2-IT1-201ENST00000439185 ANKRD29Q8N6D5 301 aa0.26□□□□□ -2.37
UPP2-IT1-201ENST00000439185 PPP1R2P1Q96PQ5 205 aa0.26□□□□□ -2.37
UPP2-IT1-201ENST00000439185 TSPAN32Q96QS1 320 aa0.26□□□□□ -2.37
UPP2-IT1-201ENST00000439185 MRPS26Q9BYN8 205 aaKnown RBP0.26□□□□□ -2.37
UPP2-IT1-201ENST00000439185 C10orf95Q9H7T3 257 aa0.26□□□□□ -2.37
UPP2-IT1-201ENST00000439185 SLC35A3Q9Y2D2 325 aa0.26□□□□□ -2.37
UPP2-IT1-201ENST00000439185 U3KQ87 197 aa0.26□□□□□ -2.37
UPP2-IT1-201ENST00000439185 ECM29Q5VYK3 1845 aa0.26□□□□□ -2.37
UPP2-IT1-201ENST00000439185 ASCC3Q8N3C0 2202 aaKnown RBP0.25□□□□□ -2.37
UPP2-IT1-201ENST00000439185 CASP8AP2Q9UKL3 1982 aa0.25□□□□□ -2.37
UPP2-IT1-201ENST00000439185 SNAPC4Q5SXM2 1469 aa0.25□□□□□ -2.37
UPP2-IT1-201ENST00000439185 WRNQ14191 1432 aaPredicted RBP eCLIP0.25□□□□□ -2.37
UPP2-IT1-201ENST00000439185 CCDC160A6NGH7 325 aa0.25□□□□□ -2.37
UPP2-IT1-201ENST00000439185 CETN3O15182 167 aa0.25□□□□□ -2.37
UPP2-IT1-201ENST00000439185 TNNC2P02585 160 aa0.25□□□□□ -2.37
UPP2-IT1-201ENST00000439185 RPS20P60866 119 aaKnown RBP0.25□□□□□ -2.37
UPP2-IT1-201ENST00000439185 TPM4P67936 248 aa0.25□□□□□ -2.37
UPP2-IT1-201ENST00000439185 TRAPPC6BQ86SZ2 158 aa0.25□□□□□ -2.37
UPP2-IT1-201ENST00000439185 OR13D1Q8NGV5 346 aa0.25□□□□□ -2.37
UPP2-IT1-201ENST00000439185 C20orf27Q9GZN8 174 aa0.25□□□□□ -2.37
UPP2-IT1-201ENST00000439185 OSTCQ9NRP0 149 aa0.25□□□□□ -2.37
UPP2-IT1-201ENST00000439185 ZNF106Q9H2Y7 1883 aaKnown RBP0.24□□□□□ -2.37
UPP2-IT1-201ENST00000439185 ASH1LQ9NR48 2969 aaKnown RBP0.24□□□□□ -2.37
UPP2-IT1-201ENST00000439185 TGIF2-C20orf24A0A0A6YYL0 155 aa0.24□□□□□ -2.37
UPP2-IT1-201ENST00000439185 TRAV3A0A0B4J244 114 aa0.24□□□□□ -2.37
UPP2-IT1-201ENST00000439185 EFNA4P52798 201 aa0.24□□□□□ -2.37
UPP2-IT1-201ENST00000439185 ACOT6Q3I5F7 207 aaPredicted RBP0.24□□□□□ -2.37
UPP2-IT1-201ENST00000439185 SPOPLQ6IQ16 392 aa0.24□□□□□ -2.37
UPP2-IT1-201ENST00000439185 C8orf74Q6P047 294 aa0.24□□□□□ -2.37
UPP2-IT1-201ENST00000439185 OR52R1Q8NGF1 315 aa0.24□□□□□ -2.37
UPP2-IT1-201ENST00000439185 ITFG2Q969R8 447 aa0.24□□□□□ -2.37
UPP2-IT1-201ENST00000439185 DCSTAMPQ9H295 470 aa0.24□□□□□ -2.37
UPP2-IT1-201ENST00000439185 MRPL27Q9P0M9 148 aaKnown RBP0.24□□□□□ -2.37
UPP2-IT1-201ENST00000439185 GUCA1BQ9UMX6 200 aa0.24□□□□□ -2.37
UPP2-IT1-201ENST00000439185 PKIGQ9Y2B9 76 aa0.24□□□□□ -2.37
UPP2-IT1-201ENST00000439185 TAF1LQ8IZX4 1826 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms