RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 NEGR1Q7Z3B1 354 aa9.76□□□□□ -0.85
PTCH1-209ENST00000437951 DUX3Q96PT4 197 aa9.76□□□□□ -0.85
PTCH1-209ENST00000437951 LY75O60449 1722 aa9.76□□□□□ -0.85
PTCH1-209ENST00000437951 COL9A1P20849 921 aa9.76□□□□□ -0.85
PTCH1-209ENST00000437951 TMEM144Q7Z5S9 345 aa9.76□□□□□ -0.85
PTCH1-209ENST00000437951 GFRA3O60609 400 aa9.76□□□□□ -0.85
PTCH1-209ENST00000437951 PSG1P11464 419 aa9.76□□□□□ -0.85
PTCH1-209ENST00000437951 ATP5G3P48201 142 aa9.76□□□□□ -0.85
PTCH1-209ENST00000437951 PPP1R27Q86WC6 154 aa9.76□□□□□ -0.85
PTCH1-209ENST00000437951 RFLNBQ8N5W9 214 aa9.76□□□□□ -0.85
PTCH1-209ENST00000437951 ZPLD1Q8TCW7 415 aa9.76□□□□□ -0.85
PTCH1-209ENST00000437951 MRAPQ8TCY5 172 aa9.76□□□□□ -0.85
PTCH1-209ENST00000437951 GGTLC1Q9BX51 225 aa9.76□□□□□ -0.85
PTCH1-209ENST00000437951 IGHV3OR16-12A0A075B7B8 117 aa9.76□□□□□ -0.85
PTCH1-209ENST00000437951 CT55Q8WUE5 264 aa9.76□□□□□ -0.85
PTCH1-209ENST00000437951 PGFP49763 221 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 EGR4Q05215 589 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 TFF3Q07654 80 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 LOC105371242A0A075B767 164 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 PPIAL4CA0A0B4J2A2 164 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 PPIAL4GP0DN37 164 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 TIMP3P35625 211 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 PRSS12P56730 875 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 C9orf40Q8IXQ3 194 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 LAMTOR3Q9UHA4 124 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 TRAV14DV4A0A0A6YYC5 116 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 CD28P10747 220 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 TEX38Q6PEX7 206 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 RNASE7Q9H1E1 156 aaKnown RBP9.75□□□□□ -0.85
PTCH1-209ENST00000437951 KLF4O43474 513 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 SRD5A1P18405 259 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 GUSBP1Q15486 140 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 PLXND1Q9Y4D7 1925 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 TRGV11A0A075B6L2 103 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 SAA1P0DJI8 122 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-209ENST00000437951 HOXD3P31249 432 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-209ENST00000437951 UCN2Q96RP3 112 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 RTBDNQ9BSG5 229 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-209ENST00000437951 PKDREJQ9NTG1 2253 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 IGFBP2P18065 325 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 FAM166AQ6J272 317 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 WFDC6Q9BQY6 131 aa9.75□□□□□ -0.85
PTCH1-209ENST00000437951 UPK2O00526 184 aa9.74□□□□□ -0.85
PTCH1-209ENST00000437951 LHFPL6Q9Y693 200 aa9.74□□□□□ -0.85
PTCH1-209ENST00000437951 AHRRA9YTQ3 701 aa9.74□□□□□ -0.85
PTCH1-209ENST00000437951 F8WEM9 126 aa9.74□□□□□ -0.85
PTCH1-209ENST00000437951 FAM89BQ8N5H3 189 aa9.74□□□□□ -0.85
PTCH1-209ENST00000437951 SCARF2Q96GP6 870 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-209ENST00000437951 SLC25A39Q9BZJ4 359 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-209ENST00000437951 SELLP14151 372 aa9.74□□□□□ -0.85
PTCH1-209ENST00000437951 DENND4AQ7Z401 1863 aa9.74□□□□□ -0.85
PTCH1-209ENST00000437951 TBX6O95947 436 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-209ENST00000437951 RNASE4P34096 147 aaKnown RBP9.74□□□□□ -0.85
PTCH1-209ENST00000437951 OR5P3Q8WZ94 311 aa9.74□□□□□ -0.85
PTCH1-209ENST00000437951 JPT2Q9H910 190 aa9.74□□□□□ -0.85
PTCH1-209ENST00000437951 PILRBQ9UKJ0 227 aa9.74□□□□□ -0.85
PTCH1-209ENST00000437951 WISP3O95389 354 aaPredicted RBP9.73□□□□□ -0.85
PTCH1-209ENST00000437951 C3AR1Q16581 482 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 CXCL10P02778 98 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 CISD3P0C7P0 127 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 MYOD1P15172 320 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 NRN1LQ496H8 165 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 TPRX1Q8N7U7 411 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 CFHR5Q9BXR6 569 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 DUSP14O95147 198 aaKnown RBP9.73□□□□□ -0.85
PTCH1-209ENST00000437951 FGF11Q92914 225 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 C20orf144Q9BQM9 153 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 TNCP24821 2201 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 GVINP1Q7Z2Y8 2422 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 PIN1P1O15428 100 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 PMS2CLQ68D20 193 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 C19orf48Q6RUI8 117 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 A0A1W2PQF6 199 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 A8MWP6 167 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 SOCS3O14543 225 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 CEACAM1P13688 526 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 GAGE2AQ6NT46 116 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 GLRX5Q86SX6 157 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 RASL10AQ92737 203 aa9.73□□□□□ -0.85
PTCH1-209ENST00000437951 PRR33A8MZF0 331 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 SYS1-DBNDD2H3BUS1 97 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 REG1AP05451 166 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 STRCP1A6NGW2 1772 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 FCN3O75636 299 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 CCL3P10147 92 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 EGR1P18146 543 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 SRSF7Q16629 238 aaKnown RBP eCLIP9.72□□□□□ -0.85
PTCH1-209ENST00000437951 A0A1W2PPV9 198 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 GATD1Q8NB37 220 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 JMJD8Q96S16 334 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 DUTP33316 252 aaKnown RBP9.72□□□□□ -0.85
PTCH1-209ENST00000437951 FAM214BQ7L5A3 538 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 LIMS2Q7Z4I7 341 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 TMEM54Q969K7 222 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 MSGN1A6NI15 193 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 SFTA2Q6UW10 78 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 ZNF385AQ96PM9 386 aaKnown RBP9.72□□□□□ -0.85
PTCH1-209ENST00000437951 IGKV1D-42A0A075B6H8 117 aa9.72□□□□□ -0.85
PTCH1-209ENST00000437951 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-209ENST00000437951 C9orf118A6NHY6 69 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms