RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 BPESC1Q9GZL8 116 aa20.52■□□□□ 0.88
CPNE1-216ENST00000437340 F11RQ9Y624 299 aaKnown RBP20.52■□□□□ 0.88
CPNE1-216ENST00000437340 ARHGAP32A7KAX9 2087 aa20.52■□□□□ 0.88
CPNE1-216ENST00000437340 COX6B1P14854 86 aa20.51■□□□□ 0.87
CPNE1-216ENST00000437340 GATA2P23769 480 aaPredicted RBP20.51■□□□□ 0.87
CPNE1-216ENST00000437340 AKAP6Q13023 2319 aa20.51■□□□□ 0.87
CPNE1-216ENST00000437340 TENM4Q6N022 2769 aa20.51■□□□□ 0.87
CPNE1-216ENST00000437340 MIR17HGQ75NE6 70 aa20.51■□□□□ 0.87
CPNE1-216ENST00000437340 TMEM167BQ9NRX6 74 aa20.51■□□□□ 0.87
CPNE1-216ENST00000437340 NAV3Q8IVL0 2385 aa20.51■□□□□ 0.87
CPNE1-216ENST00000437340 LCN2P80188 198 aa20.51■□□□□ 0.87
CPNE1-216ENST00000437340 PQLC2Q6ZP29 291 aa20.51■□□□□ 0.87
CPNE1-216ENST00000437340 C22orf15Q8WYQ4 148 aa20.51■□□□□ 0.87
CPNE1-216ENST00000437340 IGKV1D-37A0A075B6S9 117 aa20.5■□□□□ 0.87
CPNE1-216ENST00000437340 PSMB11A5LHX3 300 aa20.5■□□□□ 0.87
CPNE1-216ENST00000437340 NPPCP23582 126 aa20.5■□□□□ 0.87
CPNE1-216ENST00000437340 PDLIM4P50479 330 aa20.5■□□□□ 0.87
CPNE1-216ENST00000437340 MFAP2P55001 183 aa20.5■□□□□ 0.87
CPNE1-216ENST00000437340 RAB5BP61020 215 aa20.5■□□□□ 0.87
CPNE1-216ENST00000437340 RPL23P62829 140 aaKnown RBP20.5■□□□□ 0.87
CPNE1-216ENST00000437340 OR2T10Q8NGZ9 312 aa20.5■□□□□ 0.87
CPNE1-216ENST00000437340 EAF1Q96JC9 268 aaPredicted RBP20.5■□□□□ 0.87
CPNE1-216ENST00000437340 C1orf196B1AJZ1 125 aa20.49■□□□□ 0.87
CPNE1-216ENST00000437340 CLDN34H7C241 214 aa20.49■□□□□ 0.87
CPNE1-216ENST00000437340 FCN1O00602 326 aa20.49■□□□□ 0.87
CPNE1-216ENST00000437340 FOXH1O75593 365 aa20.49■□□□□ 0.87
CPNE1-216ENST00000437340 LGALS4P56470 323 aa20.49■□□□□ 0.87
CPNE1-216ENST00000437340 MISP3Q96FF7 219 aa20.49■□□□□ 0.87
CPNE1-216ENST00000437340 PFDN5Q99471 154 aa20.49■□□□□ 0.87
CPNE1-216ENST00000437340 DNAJC4Q9NNZ3 241 aa20.49■□□□□ 0.87
CPNE1-216ENST00000437340 DOK5Q9P104 306 aa20.49■□□□□ 0.87
CPNE1-216ENST00000437340 TBL2Q9Y4P3 447 aaKnown RBP20.49■□□□□ 0.87
CPNE1-216ENST00000437340 IGHV4-39P01824 125 aa20.49■□□□□ 0.87
CPNE1-216ENST00000437340 RND2P52198 227 aa20.49■□□□□ 0.87
CPNE1-216ENST00000437340 ELOBQ15370 118 aa20.49■□□□□ 0.87
CPNE1-216ENST00000437340 ADIRFQ15847 76 aa20.49■□□□□ 0.87
CPNE1-216ENST00000437340 SSX2Q16385 188 aa20.49■□□□□ 0.87
CPNE1-216ENST00000437340 TMEM116Q8NCL8 245 aa20.49■□□□□ 0.87
CPNE1-216ENST00000437340 OR1L4Q8NGR5 311 aa20.49■□□□□ 0.87
CPNE1-216ENST00000437340 TMEM37Q8WXS4 190 aa20.49■□□□□ 0.87
CPNE1-216ENST00000437340 SLC25A33Q9BSK2 321 aa20.49■□□□□ 0.87
CPNE1-216ENST00000437340 PLXNB1O43157 2135 aa20.48■□□□□ 0.87
CPNE1-216ENST00000437340 TOX4O94842 621 aa20.47■□□□□ 0.87
CPNE1-216ENST00000437340 C8orf88P0DMB2 117 aa20.47■□□□□ 0.87
CPNE1-216ENST00000437340 EBI3Q14213 229 aa20.47■□□□□ 0.87
CPNE1-216ENST00000437340 OR51G1Q8NGK1 321 aa20.47■□□□□ 0.87
CPNE1-216ENST00000437340 TRGV9Q99603 122 aa20.47■□□□□ 0.87
CPNE1-216ENST00000437340 MRPL36Q9P0J6 103 aaKnown RBP20.47■□□□□ 0.87
CPNE1-216ENST00000437340 YTHDF2Q9Y5A9 579 aaKnown RBP20.47■□□□□ 0.87
CPNE1-216ENST00000437340 CRYBG3Q68DQ2 2970 aa20.47■□□□□ 0.87
CPNE1-216ENST00000437340 A0A1W2PRD5 423 aa20.46■□□□□ 0.87
CPNE1-216ENST00000437340 A0A1W2PRF3 423 aa20.46■□□□□ 0.87
CPNE1-216ENST00000437340 A0A1W2PRM7 423 aa20.46■□□□□ 0.87
CPNE1-216ENST00000437340 CNIH1O95406 144 aa20.46■□□□□ 0.87
CPNE1-216ENST00000437340 UBE2E1P51965 193 aa20.46■□□□□ 0.87
CPNE1-216ENST00000437340 BPIFB3P59826 476 aa20.46■□□□□ 0.87
CPNE1-216ENST00000437340 POLR3KQ9Y2Y1 108 aaPredicted RBP20.46■□□□□ 0.87
CPNE1-216ENST00000437340 COL8A1P27658 744 aa20.46■□□□□ 0.87
CPNE1-216ENST00000437340 C5orf64Q2M2E5 130 aa20.46■□□□□ 0.87
CPNE1-216ENST00000437340 Q8WTZ3 238 aa20.46■□□□□ 0.87
CPNE1-216ENST00000437340 USP9YO00507 2555 aaPredicted RBP20.45■□□□□ 0.86
CPNE1-216ENST00000437340 NDUFB4O95168 129 aa20.45■□□□□ 0.86
CPNE1-216ENST00000437340 HES1Q14469 280 aa20.45■□□□□ 0.86
CPNE1-216ENST00000437340 C1QL4Q86Z23 238 aa20.45■□□□□ 0.86
CPNE1-216ENST00000437340 OR1L6Q8NGR2 347 aa20.45■□□□□ 0.86
CPNE1-216ENST00000437340 ZNF503Q96F45 646 aa20.45■□□□□ 0.86
CPNE1-216ENST00000437340 UHRF2Q96PU4 802 aa20.45■□□□□ 0.86
CPNE1-216ENST00000437340 TBX15Q96SF7 602 aa20.45■□□□□ 0.86
CPNE1-216ENST00000437340 CCL19Q99731 98 aa20.45■□□□□ 0.86
CPNE1-216ENST00000437340 TNFRSF19Q9NS68 423 aa20.45■□□□□ 0.86
CPNE1-216ENST00000437340 COX7A2P2O60397 106 aa20.44■□□□□ 0.86
CPNE1-216ENST00000437340 IGHV3-48P01763 117 aa20.44■□□□□ 0.86
CPNE1-216ENST00000437340 APELAP0DMC3 54 aa20.44■□□□□ 0.86
CPNE1-216ENST00000437340 ZNF90Q03938 601 aa20.44■□□□□ 0.86
CPNE1-216ENST00000437340 KIAA0141Q14154 515 aaPredicted RBP20.44■□□□□ 0.86
CPNE1-216ENST00000437340 Q8N6K4 173 aa20.44■□□□□ 0.86
CPNE1-216ENST00000437340 CTRB1P17538 263 aa20.44■□□□□ 0.86
CPNE1-216ENST00000437340 CTRB2Q6GPI1 263 aa20.44■□□□□ 0.86
CPNE1-216ENST00000437340 ZNF343Q6P1L6 599 aa20.44■□□□□ 0.86
CPNE1-216ENST00000437340 DYNAPQ8N1N2 210 aa20.44■□□□□ 0.86
CPNE1-216ENST00000437340 C11orf52Q96A22 123 aa20.44■□□□□ 0.86
CPNE1-216ENST00000437340 BIN3Q9NQY0 253 aa20.44■□□□□ 0.86
CPNE1-216ENST00000437340 ELOA3CA0A087WX78 387 aaPredicted RBP20.43■□□□□ 0.86
CPNE1-216ENST00000437340 OR7C2O60412 319 aa20.43■□□□□ 0.86
CPNE1-216ENST00000437340 C10orf113Q5VZT2 155 aa20.43■□□□□ 0.86
CPNE1-216ENST00000437340 OR4X1Q8NH49 305 aa20.43■□□□□ 0.86
CPNE1-216ENST00000437340 ANAPC16Q96DE5 110 aa20.43■□□□□ 0.86
CPNE1-216ENST00000437340 DMRT1Q9Y5R6 373 aa20.43■□□□□ 0.86
CPNE1-216ENST00000437340 URGCP-MRPS24S4R325 110 aa20.43■□□□□ 0.86
CPNE1-216ENST00000437340 FXYD3Q14802 87 aa20.42■□□□□ 0.86
CPNE1-216ENST00000437340 C19orf35Q6ZS72 473 aa20.42■□□□□ 0.86
CPNE1-216ENST00000437340 FAM167A-AS1Q96KT0 104 aa20.42■□□□□ 0.86
CPNE1-216ENST00000437340 PIMREGQ9BSJ6 248 aa20.42■□□□□ 0.86
CPNE1-216ENST00000437340 LPAR2Q9HBW0 351 aa20.42■□□□□ 0.86
CPNE1-216ENST00000437340 CD24P25063 80 aa20.41■□□□□ 0.86
CPNE1-216ENST00000437340 ZFP82Q8N141 532 aa20.41■□□□□ 0.86
CPNE1-216ENST00000437340 WNT10AQ9GZT5 417 aa20.41■□□□□ 0.86
CPNE1-216ENST00000437340 SCO2A0A1W2PP80 73 aa20.41■□□□□ 0.86
CPNE1-216ENST00000437340 NDUFS8O00217 210 aa20.41■□□□□ 0.86
CPNE1-216ENST00000437340 PATE2Q6UY27 113 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms