RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 LINC01559Q495D7 138 aa9.38□□□□□ -0.91
SCN4A-201ENST00000435607 USMG5Q96IX5 58 aa9.38□□□□□ -0.91
SCN4A-201ENST00000435607 YPEL2Q96QA6 119 aa9.38□□□□□ -0.91
SCN4A-201ENST00000435607 ZNF561-AS1K7EIQ3 104 aa9.38□□□□□ -0.91
SCN4A-201ENST00000435607 CD160O95971 181 aa9.38□□□□□ -0.91
SCN4A-201ENST00000435607 FOXA3P55318 350 aaPredicted RBP9.38□□□□□ -0.91
SCN4A-201ENST00000435607 RASL11AQ6T310 242 aa9.38□□□□□ -0.91
SCN4A-201ENST00000435607 SPCS1Q9Y6A9 102 aa9.38□□□□□ -0.91
SCN4A-201ENST00000435607 C12orf77C9JDV5 145 aa9.38□□□□□ -0.91
SCN4A-201ENST00000435607 TMEM238C9JI98 176 aa9.38□□□□□ -0.91
SCN4A-201ENST00000435607 APOC4P55056 127 aa9.38□□□□□ -0.91
SCN4A-201ENST00000435607 SRSF4Q08170 494 aaKnown RBP9.38□□□□□ -0.91
SCN4A-201ENST00000435607 LCN12Q6JVE5 192 aa9.38□□□□□ -0.91
SCN4A-201ENST00000435607 LCNL1Q6ZST4 164 aa9.38□□□□□ -0.91
SCN4A-201ENST00000435607 ACACAQ13085 2346 aa9.38□□□□□ -0.91
SCN4A-201ENST00000435607 UMODP07911 640 aa9.38□□□□□ -0.91
SCN4A-201ENST00000435607 PSG1P11464 419 aa9.38□□□□□ -0.91
SCN4A-201ENST00000435607 SUMO4Q6EEV6 95 aa9.38□□□□□ -0.91
SCN4A-201ENST00000435607 ELF5Q9UKW6 265 aaPredicted RBP9.38□□□□□ -0.91
SCN4A-201ENST00000435607 CHTOPQ9Y3Y2 248 aaKnown RBP9.38□□□□□ -0.91
SCN4A-201ENST00000435607 CACNA1IQ9P0X4 2223 aa9.38□□□□□ -0.91
SCN4A-201ENST00000435607 WDYHV1Q96HA8 205 aa9.38□□□□□ -0.91
SCN4A-201ENST00000435607 TMEM187Q14656 261 aa9.37□□□□□ -0.91
SCN4A-201ENST00000435607 ATOH7Q8N100 152 aa9.37□□□□□ -0.91
SCN4A-201ENST00000435607 TIMM23O14925 209 aa9.37□□□□□ -0.91
SCN4A-201ENST00000435607 C9orf106Q8NAJ2 232 aa9.37□□□□□ -0.91
SCN4A-201ENST00000435607 ORAOV1Q8WV07 137 aa9.37□□□□□ -0.91
SCN4A-201ENST00000435607 WNK2Q9Y3S1 2297 aa9.37□□□□□ -0.91
SCN4A-201ENST00000435607 DOCK3Q8IZD9 2030 aa9.37□□□□□ -0.91
SCN4A-201ENST00000435607 TRAV8-4A0A0B4J246 113 aa9.37□□□□□ -0.91
SCN4A-201ENST00000435607 GATA3P23771 443 aa9.37□□□□□ -0.91
SCN4A-201ENST00000435607 FBLN7Q53RD9 439 aa9.37□□□□□ -0.91
SCN4A-201ENST00000435607 LIMS1P48059 325 aa9.37□□□□□ -0.91
SCN4A-201ENST00000435607 PSG7Q13046 419 aa9.37□□□□□ -0.91
SCN4A-201ENST00000435607 PIP4P2Q8N4L2 257 aa9.37□□□□□ -0.91
SCN4A-201ENST00000435607 MUC21A0A0G2JKD1 596 aa9.37□□□□□ -0.91
SCN4A-201ENST00000435607 MUC21A0A140T8X8 626 aa9.37□□□□□ -0.91
SCN4A-201ENST00000435607 LURAP1LQ8IV03 231 aa9.37□□□□□ -0.91
SCN4A-201ENST00000435607 IZUMO1RA6ND01 250 aa9.36□□□□□ -0.91
SCN4A-201ENST00000435607 LINC00614P0C842 121 aa9.36□□□□□ -0.91
SCN4A-201ENST00000435607 NKAPP1Q8N9T2 125 aa9.36□□□□□ -0.91
SCN4A-201ENST00000435607 AMBPP02760 352 aa9.36□□□□□ -0.91
SCN4A-201ENST00000435607 RND3P61587 244 aa9.36□□□□□ -0.91
SCN4A-201ENST00000435607 ASPHD2Q6ICH7 369 aa9.36□□□□□ -0.91
SCN4A-201ENST00000435607 SSBP4Q9BWG4 385 aaPredicted RBP9.36□□□□□ -0.91
SCN4A-201ENST00000435607 GPHA2Q96T91 129 aa9.36□□□□□ -0.91
SCN4A-201ENST00000435607 MIXL1Q9H2W2 232 aa9.36□□□□□ -0.91
SCN4A-201ENST00000435607 TP53BP1Q12888 1972 aaPredicted RBP9.36□□□□□ -0.91
SCN4A-201ENST00000435607 TMEM144Q7Z5S9 345 aa9.36□□□□□ -0.91
SCN4A-201ENST00000435607 LEPROTO15243 131 aa9.36□□□□□ -0.91
SCN4A-201ENST00000435607 DANCRP0C864 163 aa9.36□□□□□ -0.91
SCN4A-201ENST00000435607 FAM201AQ5SY85 155 aa9.36□□□□□ -0.91
SCN4A-201ENST00000435607 C1QTNF5Q9BXJ0 243 aa9.36□□□□□ -0.91
SCN4A-201ENST00000435607 CHCHD2Q9Y6H1 151 aaPredicted RBP9.36□□□□□ -0.91
SCN4A-201ENST00000435607 ALPK2Q86TB3 2170 aa9.36□□□□□ -0.91
SCN4A-201ENST00000435607 HIGD1CA8MV81 97 aa9.36□□□□□ -0.91
SCN4A-201ENST00000435607 CBLN1P23435 193 aa9.36□□□□□ -0.91
SCN4A-201ENST00000435607 RFPL3SP0C7P2 107 aa9.35□□□□□ -0.91
SCN4A-201ENST00000435607 GNLYP22749 145 aa9.35□□□□□ -0.91
SCN4A-201ENST00000435607 TEX43Q6ZNM6 134 aa9.35□□□□□ -0.91
SCN4A-201ENST00000435607 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.35□□□□□ -0.91
SCN4A-201ENST00000435607 IGKV1-8A0A0C4DH67 115 aa9.35□□□□□ -0.91
SCN4A-201ENST00000435607 ITGB1BP1O14713 200 aa9.35□□□□□ -0.91
SCN4A-201ENST00000435607 CA1P00915 261 aaPredicted RBP9.35□□□□□ -0.91
SCN4A-201ENST00000435607 DAD1P61803 113 aa9.35□□□□□ -0.91
SCN4A-201ENST00000435607 PLEKHB2Q96CS7 222 aa9.35□□□□□ -0.91
SCN4A-201ENST00000435607 TRAF4Q9BUZ4 470 aaPredicted RBP9.35□□□□□ -0.91
SCN4A-201ENST00000435607 CENPVL1A0A0U1RR11 272 aa9.35□□□□□ -0.91
SCN4A-201ENST00000435607 A0A1W2PR77 199 aa9.35□□□□□ -0.91
SCN4A-201ENST00000435607 VMO1Q7Z5L0 202 aa9.35□□□□□ -0.91
SCN4A-201ENST00000435607 GLI3P10071 1580 aa9.35□□□□□ -0.91
SCN4A-201ENST00000435607 PGPEP1LA6NFU8 196 aa9.35□□□□□ -0.91
SCN4A-201ENST00000435607 C1QL1O75973 258 aa9.35□□□□□ -0.91
SCN4A-201ENST00000435607 ACTL10Q5JWF8 245 aa9.35□□□□□ -0.91
SCN4A-201ENST00000435607 UCP1P25874 307 aa9.35□□□□□ -0.91
SCN4A-201ENST00000435607 REPIN1Q9BWE0 567 aaKnown RBP9.35□□□□□ -0.91
SCN4A-201ENST00000435607 TRBV5-7A0A0A0MS05 114 aa9.35□□□□□ -0.91
SCN4A-201ENST00000435607 C5orf66Q9H5L9 145 aa9.35□□□□□ -0.91
SCN4A-201ENST00000435607 KIF13BQ9NQT8 1826 aa9.34□□□□□ -0.91
SCN4A-201ENST00000435607 NAT1P18440 290 aa9.34□□□□□ -0.91
SCN4A-201ENST00000435607 SNHG12Q9BXW3 62 aa9.34□□□□□ -0.91
SCN4A-201ENST00000435607 ERG28Q9UKR5 140 aa9.34□□□□□ -0.91
SCN4A-201ENST00000435607 H0YL77 283 aa9.34□□□□□ -0.91
SCN4A-201ENST00000435607 TIAF1O95411 115 aa9.34□□□□□ -0.91
SCN4A-201ENST00000435607 CCL1P22362 96 aa9.34□□□□□ -0.91
SCN4A-201ENST00000435607 NDUFS8O00217 210 aa9.34□□□□□ -0.91
SCN4A-201ENST00000435607 CCL3L1P16619 93 aa9.34□□□□□ -0.91
SCN4A-201ENST00000435607 CELA3AP09093 270 aa9.34□□□□□ -0.91
SCN4A-201ENST00000435607 HIST1H4AP62805 103 aaKnown RBP9.34□□□□□ -0.91
SCN4A-201ENST00000435607 C5orf30Q96GV9 206 aa9.34□□□□□ -0.91
SCN4A-201ENST00000435607 DLEC1Q9Y238 1755 aa9.34□□□□□ -0.91
SCN4A-201ENST00000435607 SAA2-SAA4A0A096LPE2 208 aa9.34□□□□□ -0.91
SCN4A-201ENST00000435607 C22orf46C9J442 243 aa9.34□□□□□ -0.91
SCN4A-201ENST00000435607 SAA2P0DJI9 122 aaPredicted RBP9.34□□□□□ -0.91
SCN4A-201ENST00000435607 TIMP3P35625 211 aa9.34□□□□□ -0.91
SCN4A-201ENST00000435607 ZNF672Q499Z4 452 aaPredicted RBP9.34□□□□□ -0.91
SCN4A-201ENST00000435607 LRP5O75197 1615 aa9.34□□□□□ -0.91
SCN4A-201ENST00000435607 PRSS23O95084 383 aa9.34□□□□□ -0.91
SCN4A-201ENST00000435607 IRF3Q14653 427 aa9.34□□□□□ -0.91
SCN4A-201ENST00000435607 TMEM249Q2WGJ8 235 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms