RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 A0A1W2PRE2 83 aa13.42□□□□□ -0.26
LIMK1-203ENST00000435201 PGPEP1LA6NFU8 196 aa13.42□□□□□ -0.26
LIMK1-203ENST00000435201 CORTO00230 105 aa13.42□□□□□ -0.26
LIMK1-203ENST00000435201 COX7A2P2O60397 106 aa13.42□□□□□ -0.26
LIMK1-203ENST00000435201 REG1AP05451 166 aa13.42□□□□□ -0.26
LIMK1-203ENST00000435201 CRYGCP07315 174 aa13.42□□□□□ -0.26
LIMK1-203ENST00000435201 SOD3P08294 240 aa13.42□□□□□ -0.26
LIMK1-203ENST00000435201 CNTFRP26992 372 aa13.42□□□□□ -0.26
LIMK1-203ENST00000435201 SSX2Q16385 188 aa13.42□□□□□ -0.26
LIMK1-203ENST00000435201 OR4X1Q8NH49 305 aa13.42□□□□□ -0.26
LIMK1-203ENST00000435201 AURKAIP1Q9NWT8 199 aaPredicted RBP13.42□□□□□ -0.26
LIMK1-203ENST00000435201 IGKV1D-37A0A075B6S9 117 aa13.41□□□□□ -0.26
LIMK1-203ENST00000435201 M0R1W7 72 aa13.41□□□□□ -0.26
LIMK1-203ENST00000435201 LY6HO94772 140 aa13.41□□□□□ -0.26
LIMK1-203ENST00000435201 S100A12P80511 92 aa13.41□□□□□ -0.26
LIMK1-203ENST00000435201 SSBP2P81877 361 aaPredicted RBP13.41□□□□□ -0.26
LIMK1-203ENST00000435201 PAX2Q02962 417 aa13.41□□□□□ -0.26
LIMK1-203ENST00000435201 PRB3Q04118 309 aaPredicted RBP13.41□□□□□ -0.26
LIMK1-203ENST00000435201 FOXL1Q12952 345 aa13.41□□□□□ -0.26
LIMK1-203ENST00000435201 DTX2Q86UW9 622 aa13.41□□□□□ -0.26
LIMK1-203ENST00000435201 OR1P1Q8NH06 330 aa13.41□□□□□ -0.26
LIMK1-203ENST00000435201 OCC1Q8TAD7 63 aa13.41□□□□□ -0.26
LIMK1-203ENST00000435201 S100A2P29034 98 aa13.4□□□□□ -0.26
LIMK1-203ENST00000435201 C4orf17Q53FE4 359 aa13.4□□□□□ -0.26
LIMK1-203ENST00000435201 TPTE2P1Q5T6R2 138 aa13.4□□□□□ -0.26
LIMK1-203ENST00000435201 C10orf113Q5VZT2 155 aa13.4□□□□□ -0.26
LIMK1-203ENST00000435201 TEX38Q6PEX7 206 aa13.4□□□□□ -0.26
LIMK1-203ENST00000435201 OR11H6Q8NGC7 330 aa13.4□□□□□ -0.26
LIMK1-203ENST00000435201 FAM167A-AS1Q96KT0 104 aa13.4□□□□□ -0.26
LIMK1-203ENST00000435201 SSBP3Q9BWW4 388 aaPredicted RBP13.4□□□□□ -0.26
LIMK1-203ENST00000435201 SLC25A2Q9BXI2 301 aa13.4□□□□□ -0.26
LIMK1-203ENST00000435201 PRORYQ9H606 182 aa13.4□□□□□ -0.26
LIMK1-203ENST00000435201 GAR1Q9NY12 217 aaKnown RBP13.4□□□□□ -0.26
LIMK1-203ENST00000435201 NAV3Q8IVL0 2385 aa13.4□□□□□ -0.26
LIMK1-203ENST00000435201 HTR1DP28221 377 aa13.4□□□□□ -0.26
LIMK1-203ENST00000435201 HCP5Q6MZN7 132 aa13.4□□□□□ -0.26
LIMK1-203ENST00000435201 OR10G8Q8NGN5 311 aa13.4□□□□□ -0.26
LIMK1-203ENST00000435201 MISP3Q96FF7 219 aa13.4□□□□□ -0.26
LIMK1-203ENST00000435201 CEACAM3P40198 252 aa13.39□□□□□ -0.27
LIMK1-203ENST00000435201 UBE2L3P68036 154 aaKnown RBP13.39□□□□□ -0.27
LIMK1-203ENST00000435201 ZNF90Q03938 601 aa13.39□□□□□ -0.27
LIMK1-203ENST00000435201 EAF1Q96JC9 268 aaPredicted RBP13.39□□□□□ -0.27
LIMK1-203ENST00000435201 TRGV9Q99603 122 aa13.39□□□□□ -0.27
LIMK1-203ENST00000435201 MRPL36Q9P0J6 103 aaKnown RBP13.39□□□□□ -0.27
LIMK1-203ENST00000435201 PITPNC1Q9UKF7 332 aa13.39□□□□□ -0.27
LIMK1-203ENST00000435201 LOC105371242A0A075B767 164 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 HELTA6NFD8 242 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 IFITM10A6NMD0 228 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 OR10J4P0C629 311 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 LY6DQ14210 128 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 CLEC12BQ2HXU8 276 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 ACTL10Q5JWF8 245 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 HIST3H2BBQ8N257 126 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 OR5AU1Q8NGC0 362 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 SRSF8Q9BRL6 282 aaKnown RBP13.38□□□□□ -0.27
LIMK1-203ENST00000435201 TNFRSF19Q9NS68 423 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 DPM3Q9P2X0 92 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 F11RQ9Y624 299 aaKnown RBP13.38□□□□□ -0.27
LIMK1-203ENST00000435201 GGTLC3B5MD39 225 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 TEX22C9J3V5 150 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 CRYBB3P26998 211 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 GNG4P50150 75 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 MFAP2P55001 183 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 ARF6P62330 175 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 TMEM116Q8NCL8 245 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 SGMS2Q8NHU3 365 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 FBXL15Q9H469 300 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 ZNF355PQ9NSJ1 428 aa13.38□□□□□ -0.27
LIMK1-203ENST00000435201 SPTBN4Q9H254 2564 aa13.37□□□□□ -0.27
LIMK1-203ENST00000435201 ABCA4P78363 2273 aa13.37□□□□□ -0.27
LIMK1-203ENST00000435201 TRAV9-1A0A075B6T8 112 aa13.37□□□□□ -0.27
LIMK1-203ENST00000435201 K7EN84 100 aa13.37□□□□□ -0.27
LIMK1-203ENST00000435201 TIMM23O14925 209 aa13.37□□□□□ -0.27
LIMK1-203ENST00000435201 IGHV3-48P01763 117 aa13.37□□□□□ -0.27
LIMK1-203ENST00000435201 HNF1AP20823 631 aa13.37□□□□□ -0.27
LIMK1-203ENST00000435201 PLGLAQ15195 96 aa13.37□□□□□ -0.27
LIMK1-203ENST00000435201 PATE2Q6UY27 113 aa13.37□□□□□ -0.27
LIMK1-203ENST00000435201 SRSF12Q8WXF0 261 aaKnown RBP13.37□□□□□ -0.27
LIMK1-203ENST00000435201 TPRP12270 2363 aaKnown RBP13.37□□□□□ -0.27
LIMK1-203ENST00000435201 ATRXP46100 2492 aa13.36□□□□□ -0.27
LIMK1-203ENST00000435201 TRAV5A0A0B4J249 113 aa13.36□□□□□ -0.27
LIMK1-203ENST00000435201 PRTN3P24158 256 aa13.36□□□□□ -0.27
LIMK1-203ENST00000435201 CENPWQ5EE01 88 aa13.36□□□□□ -0.27
LIMK1-203ENST00000435201 MORN5Q5VZ52 161 aa13.36□□□□□ -0.27
LIMK1-203ENST00000435201 STXBP6Q8NFX7 210 aa13.36□□□□□ -0.27
LIMK1-203ENST00000435201 PAXXQ9BUH6 204 aa13.36□□□□□ -0.27
LIMK1-203ENST00000435201 A0A0U1RQK1 487 aa13.36□□□□□ -0.27
LIMK1-203ENST00000435201 ZNF320A2RRD8 509 aa13.36□□□□□ -0.27
LIMK1-203ENST00000435201 ODF3BA8MYP8 253 aa13.36□□□□□ -0.27
LIMK1-203ENST00000435201 SUMO1P63165 101 aaKnown RBP13.36□□□□□ -0.27
LIMK1-203ENST00000435201 C1orf122Q6ZSJ8 110 aa13.36□□□□□ -0.27
LIMK1-203ENST00000435201 PERPQ96FX8 193 aa13.36□□□□□ -0.27
LIMK1-203ENST00000435201 OR51M1Q9H341 326 aa13.36□□□□□ -0.27
LIMK1-203ENST00000435201 MOSP00540 346 aa13.35□□□□□ -0.27
LIMK1-203ENST00000435201 GPR6P46095 362 aaPredicted RBP13.35□□□□□ -0.27
LIMK1-203ENST00000435201 LDLRAD2Q5SZI1 272 aa13.35□□□□□ -0.27
LIMK1-203ENST00000435201 GFI1BQ5VTD9 330 aa13.35□□□□□ -0.27
LIMK1-203ENST00000435201 UNQ6494/PRO21346Q6UXR6 183 aa13.35□□□□□ -0.27
LIMK1-203ENST00000435201 LINC00305Q7Z4B0 112 aa13.35□□□□□ -0.27
LIMK1-203ENST00000435201 KIR3DL3Q8N743 410 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms