RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 SLC35A2P78381 396 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 LIN52Q52LA3 116 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 TMEM42Q69YG0 159 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 LY6G5BQ8NDX9 201 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 C1orf54Q8WWF1 131 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 IMP4Q96G21 291 aaKnown RBP3.09□□□□□ -1.91
USP54-206ENST00000433394 SERPINI1Q99574 410 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 MROQ9BYG7 248 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 VPS29Q9UBQ0 182 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 VPREB3Q9UKI3 123 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 TP53TG1Q9Y2A0 90 aa3.09□□□□□ -1.91
USP54-206ENST00000433394 LSM5Q9Y4Y9 91 aaKnown RBP3.09□□□□□ -1.91
USP54-206ENST00000433394 BRWD1Q9NSI6 2320 aa3.09□□□□□ -1.92
USP54-206ENST00000433394 TRIOBPQ9H2D6 2365 aa3.09□□□□□ -1.92
USP54-206ENST00000433394 CHD9Q3L8U1 2897 aa3.09□□□□□ -1.92
USP54-206ENST00000433394 PTPRSQ13332 1948 aa3.09□□□□□ -1.92
USP54-206ENST00000433394 ANAPC1Q9H1A4 1944 aa3.09□□□□□ -1.92
USP54-206ENST00000433394 NCOR1O75376 2440 aa3.09□□□□□ -1.92
USP54-206ENST00000433394 CHD5Q8TDI0 1954 aa3.09□□□□□ -1.92
USP54-206ENST00000433394 MYO18AQ92614 2054 aaKnown RBP3.08□□□□□ -1.92
USP54-206ENST00000433394 CHD7Q9P2D1 2997 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 hCG_1818297A0A087WSY0 165 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 A0A1W2PNN7 141 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 SMIM9A6NGZ8 99 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 SLC17A3O00476 420 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 PDE6DO43924 150 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 S1PR2O95136 353 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 IFNA1P01562 189 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 IGLV3-27P01718 113 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 SERPINA7P05543 415 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 OR13C7P0DN81 318 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 ALOX5APP20292 161 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 KDELR1P24390 212 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 CLDN12P56749 244 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 DEFB103AP81534 67 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 EDDM3AQ14507 147 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 OR8G1Q15617 311 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 SMIM21Q3B7S5 101 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 NOXRED1Q6NXP6 359 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 DEFB106AQ8N104 65 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 OR13C6PQ8NH95 151 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 MFSD8Q8NHS3 518 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 CD200R1Q8TD46 325 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 GPR119Q8TDV5 335 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 ASB17Q8WXJ9 295 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 MAGOHBQ96A72 148 aaKnown RBP3.08□□□□□ -1.92
USP54-206ENST00000433394 PPCDCQ96CD2 204 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 OR8B2Q96RD0 313 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 SIGMAR1Q99720 223 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 CXCL16Q9H2A7 254 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 MAP1LC3AQ9H492 121 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 FAM96AQ9H5X1 160 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 NMNAT1Q9HAN9 279 aaPredicted RBP3.08□□□□□ -1.92
USP54-206ENST00000433394 ZNF230Q9UIE0 474 aaPredicted RBP3.08□□□□□ -1.92
USP54-206ENST00000433394 ANGPT4Q9Y264 503 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 LINC00588Q9Y4M8 146 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 TMEM56-RWDD3S4R434 201 aa3.08□□□□□ -1.92
USP54-206ENST00000433394 PLXNA4Q9HCM2 1894 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 HELZP42694 1942 aaKnown RBP3.07□□□□□ -1.92
USP54-206ENST00000433394 YLPM1P49750 1951 aaKnown RBP3.07□□□□□ -1.92
USP54-206ENST00000433394 A0A1B0GU33 70 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 A0A1B0GVG6 124 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 CLDN24A6NM45 220 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 GPR31O00270 319 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 DLEU1O43261 78 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 HMGA1P17096 107 aaKnown RBP3.07□□□□□ -1.92
USP54-206ENST00000433394 HSPA9P38646 679 aaKnown RBP3.07□□□□□ -1.92
USP54-206ENST00000433394 AKR1C3P42330 323 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 OR1E2P47887 323 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 AKR1D1P51857 326 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 TPI1P60174 286 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 RELAQ04206 551 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 TMEM97Q5BJF2 176 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 FAM78BQ5VT40 261 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 LPCAT3Q6P1A2 487 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 GRINAQ7Z429 371 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 UMODL1-AS1Q8N2C9 162 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 LRRC18Q8N456 261 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 OR8J3Q8NGG0 315 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 JOSD2Q8TAC2 188 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 EEF1AKMT1Q8WVE0 214 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 CMSS1Q9BQ75 279 aaKnown RBP3.07□□□□□ -1.92
USP54-206ENST00000433394 SNRNP25Q9BV90 132 aaKnown RBP3.07□□□□□ -1.92
USP54-206ENST00000433394 C1QTNF6Q9BXI9 259 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 MED28Q9H204 178 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 MIXL1Q9H2W2 232 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 TPT1P8Q9HAU6 139 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 MRPL16Q9NX20 251 aaKnown RBP3.07□□□□□ -1.92
USP54-206ENST00000433394 OBSL1O75147 1896 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 NUP210Q8TEM1 1887 aaPredicted RBP3.07□□□□□ -1.92
USP54-206ENST00000433394 GBF1Q92538 1859 aa3.07□□□□□ -1.92
USP54-206ENST00000433394 LAMA3Q16787 3333 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 IGKV1D-37A0A075B6S9 117 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 TRAV8-1A0A0A6YYK1 113 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 TINCRA0A1B0GVN0 87 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 LINC00862A6NCI5 91 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 C5orf58C9J3I9 102 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 G3V2T6 193 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 K7EP13 123 aa3.06□□□□□ -1.92
USP54-206ENST00000433394 LECT2O14960 151 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms