RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 PRB4P10163 310 aaPredicted RBP9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 CD46P15529 392 aa9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 PRDX2P32119 198 aa9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 GPR183P32249 361 aa9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 KLF5Q13887 457 aaPredicted RBP9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 WDR82Q6UXN9 313 aa9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 C11orf53Q8IXP5 236 aa9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 CD177Q8N6Q3 437 aa9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 LRRC29Q8WV35 223 aa9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 SMIM12Q96EX1 92 aa9.44□□□□□ -0.9
HMGCS1-202ENST00000433297 ICE1Q9Y2F5 2266 aa9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 C15orf65H3BRN8 121 aa9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 H3BTX0 84 aa9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 CD5LO43866 347 aa9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 HIST1H1EP10412 219 aaKnown RBP9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 ZNF430Q9H8G1 570 aaPredicted RBP9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 ABI3Q9P2A4 366 aa9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 GOSR1O95249 250 aa9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 SMIM21Q3B7S5 101 aa9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 ABHD17BQ5VST6 288 aa9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 OR10W1Q8NGF6 305 aa9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 SAP25Q8TEE9 199 aa9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 FAM173AQ9BQD7 235 aa9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 TTTY12Q9BZ98 90 aa9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 ARFGEF3Q5TH69 2177 aa9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 PEX7O00628 323 aa9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 CHEK1O14757 476 aa9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 ARF6P62330 175 aa9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 PAXXQ9BUH6 204 aa9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 HILPDAQ9Y5L2 63 aa9.43□□□□□ -0.9
HMGCS1-202ENST00000433297 TRGV8A0A0C4DH27 118 aa9.42□□□□□ -0.9
HMGCS1-202ENST00000433297 COX7A2P2O60397 106 aa9.42□□□□□ -0.9
HMGCS1-202ENST00000433297 CYC1P08574 325 aa9.42□□□□□ -0.9
HMGCS1-202ENST00000433297 HTR1DP28221 377 aa9.42□□□□□ -0.9
HMGCS1-202ENST00000433297 HBBP68871 147 aa9.42□□□□□ -0.9
HMGCS1-202ENST00000433297 FAM71F2Q6NXP2 309 aa9.42□□□□□ -0.9
HMGCS1-202ENST00000433297 BPIFA4PQ86YQ2 179 aa9.42□□□□□ -0.9
HMGCS1-202ENST00000433297 TMEM116Q8NCL8 245 aa9.42□□□□□ -0.9
HMGCS1-202ENST00000433297 OR1B1Q8NGR6 318 aa9.42□□□□□ -0.9
HMGCS1-202ENST00000433297 IDI2-AS1Q9NZ38 188 aa9.42□□□□□ -0.9
HMGCS1-202ENST00000433297 H3BUT2 72 aa9.42□□□□□ -0.9
HMGCS1-202ENST00000433297 SLC25A5P05141 298 aaKnown RBP9.42□□□□□ -0.9
HMGCS1-202ENST00000433297 FER1L6-AS1Q8NA97 138 aa9.42□□□□□ -0.9
HMGCS1-202ENST00000433297 WIPF2Q8TF74 440 aaPredicted RBP9.42□□□□□ -0.9
HMGCS1-202ENST00000433297 FAM90A9PA6NNJ1 464 aa9.41□□□□□ -0.9
HMGCS1-202ENST00000433297 FAM120AOSQ5T036 256 aa9.41□□□□□ -0.9
HMGCS1-202ENST00000433297 RASL11AQ6T310 242 aa9.41□□□□□ -0.9
HMGCS1-202ENST00000433297 IFI27L2Q9H2X8 130 aa9.41□□□□□ -0.9
HMGCS1-202ENST00000433297 SCRT2Q9NQ03 307 aa9.41□□□□□ -0.9
HMGCS1-202ENST00000433297 WISP2O76076 250 aa9.41□□□□□ -0.9
HMGCS1-202ENST00000433297 HIST1H1AQ02539 215 aaPredicted RBP9.41□□□□□ -0.9
HMGCS1-202ENST00000433297 C1orf185Q5T7R7 199 aa9.41□□□□□ -0.9
HMGCS1-202ENST00000433297 SLC25A2Q9BXI2 301 aa9.41□□□□□ -0.9
HMGCS1-202ENST00000433297 CXXC4Q9H2H0 198 aa9.41□□□□□ -0.9
HMGCS1-202ENST00000433297 IQCF6A8MYZ5 107 aa9.41□□□□□ -0.9
HMGCS1-202ENST00000433297 TNFSF15O95150 251 aa9.41□□□□□ -0.9
HMGCS1-202ENST00000433297 IGLC1P0CG04 106 aa9.41□□□□□ -0.9
HMGCS1-202ENST00000433297 SSBP2P81877 361 aaPredicted RBP9.41□□□□□ -0.9
HMGCS1-202ENST00000433297 TEX45Q8NA69 505 aa9.41□□□□□ -0.9
HMGCS1-202ENST00000433297 CT55Q8WUE5 264 aa9.41□□□□□ -0.9
HMGCS1-202ENST00000433297 MBD6Q96DN6 1003 aa9.41□□□□□ -0.9
HMGCS1-202ENST00000433297 DAZAP1Q96EP5 407 aaKnown RBP9.41□□□□□ -0.9
HMGCS1-202ENST00000433297 DSPP15924 2871 aaKnown RBP9.41□□□□□ -0.9
HMGCS1-202ENST00000433297 PGPA6NDG6 321 aa9.4□□□□□ -0.9
HMGCS1-202ENST00000433297 HLA-DRB1P01911 266 aa9.4□□□□□ -0.9
HMGCS1-202ENST00000433297 SAA2P0DJI9 122 aaPredicted RBP9.4□□□□□ -0.9
HMGCS1-202ENST00000433297 OR2Z1Q8NG97 314 aa9.4□□□□□ -0.9
HMGCS1-202ENST00000433297 RND1Q92730 232 aa9.4□□□□□ -0.9
HMGCS1-202ENST00000433297 TMUB1Q9BVT8 246 aa9.4□□□□□ -0.9
HMGCS1-202ENST00000433297 TMEM14BQ9NUH8 114 aa9.4□□□□□ -0.9
HMGCS1-202ENST00000433297 OR2J3O76001 311 aa9.4□□□□□ -0.9
HMGCS1-202ENST00000433297 RTL8BQ17RB0 113 aa9.4□□□□□ -0.9
HMGCS1-202ENST00000433297 ZNRD1Q9P1U0 126 aa9.4□□□□□ -0.9
HMGCS1-202ENST00000433297 JPT1Q9UK76 154 aa9.4□□□□□ -0.9
HMGCS1-202ENST00000433297 MRPS17Q9Y2R5 130 aaKnown RBP9.4□□□□□ -0.9
HMGCS1-202ENST00000433297 ORM2P19652 201 aa9.4□□□□□ -0.91
HMGCS1-202ENST00000433297 TMEM177Q53S58 311 aa9.4□□□□□ -0.91
HMGCS1-202ENST00000433297 FAM162BQ5T6X4 162 aa9.4□□□□□ -0.91
HMGCS1-202ENST00000433297 C10orf113Q5VZT2 155 aa9.4□□□□□ -0.91
HMGCS1-202ENST00000433297 LINC00322Q6ZN03 302 aaPredicted RBP9.4□□□□□ -0.91
HMGCS1-202ENST00000433297 BHLHA15Q7RTS1 189 aaPredicted RBP9.4□□□□□ -0.91
HMGCS1-202ENST00000433297 S100A7AQ86SG5 101 aa9.4□□□□□ -0.91
HMGCS1-202ENST00000433297 ZNF329Q86UD4 541 aa9.4□□□□□ -0.91
HMGCS1-202ENST00000433297 FOXA2Q9Y261 457 aaPredicted RBP9.4□□□□□ -0.91
HMGCS1-202ENST00000433297 TNRC6BQ9UPQ9 1833 aaKnown RBP9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 KLK10O43240 276 aa9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 P01737 135 aa9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 IGKV1-16P04430 117 aa9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 LIPFP07098 398 aa9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 OR5AL1P0C617 328 aa9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 RPS20P60866 119 aaKnown RBP9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 RAB30Q15771 203 aa9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 TMEM97Q5BJF2 176 aa9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 CT45A1Q5HYN5 189 aa9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 FAM201AQ5SY85 155 aa9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 GTF2H5Q6ZYL4 71 aa9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 RBMXL3Q8N7X1 1067 aaKnown RBP9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 CT45A3Q8NHU0 189 aa9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 FAM167A-AS1Q96KT0 104 aa9.39□□□□□ -0.91
HMGCS1-202ENST00000433297 TPPP3Q9BW30 176 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms