RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 TMEM167AQ8TBQ9 72 aa7.5□□□□□ -1.21
HMGCLL1-206ENST00000428842 BET1LQ9NYM9 111 aa7.5□□□□□ -1.21
HMGCLL1-206ENST00000428842 KIAA1456Q9P272 454 aa7.5□□□□□ -1.21
HMGCLL1-206ENST00000428842 IGHV3OR16-8A0A075B7F1 116 aa7.5□□□□□ -1.21
HMGCLL1-206ENST00000428842 C5orf52A6NGY3 159 aa7.5□□□□□ -1.21
HMGCLL1-206ENST00000428842 IFNA10P01566 189 aa7.5□□□□□ -1.21
HMGCLL1-206ENST00000428842 KIR2DS2P43631 304 aa7.5□□□□□ -1.21
HMGCLL1-206ENST00000428842 COMPP49747 757 aaPredicted RBP7.5□□□□□ -1.21
HMGCLL1-206ENST00000428842 MEOX2P50222 304 aa7.5□□□□□ -1.21
HMGCLL1-206ENST00000428842 CTAG1AP78358 180 aa7.5□□□□□ -1.21
HMGCLL1-206ENST00000428842 CCL20P78556 96 aa7.5□□□□□ -1.21
HMGCLL1-206ENST00000428842 AKIRIN2Q53H80 203 aa7.5□□□□□ -1.21
HMGCLL1-206ENST00000428842 OR5C1Q8NGR4 320 aa7.5□□□□□ -1.21
HMGCLL1-206ENST00000428842 GNPNAT1Q96EK6 184 aaPredicted RBP7.5□□□□□ -1.21
HMGCLL1-206ENST00000428842 RBM14Q96PK6 669 aaKnown RBP7.5□□□□□ -1.21
HMGCLL1-206ENST00000428842 PSENENQ9NZ42 101 aa7.5□□□□□ -1.21
HMGCLL1-206ENST00000428842 PIGBOS1A0A0B4J2F0 54 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 IGLC7A0M8Q6 106 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 M0R036 132 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 UBE2CO00762 179 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 NDUFA3O95167 84 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 LGALS7P47929 136 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 SULT1A1P50225 295 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 HSPE1P61604 102 aaKnown RBP7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 EBI3Q14213 229 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 YPEL4Q96NS1 127 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 OR5B12Q96R08 314 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 RARRES2Q99969 163 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 RASL11BQ9BPW5 248 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 NDUFA4L2Q9NRX3 87 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 FOXA2Q9Y261 457 aaPredicted RBP7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 RBFOX3A6NFN3 312 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 C15orf62A8K5M9 175 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 VDAC2P45880 294 aaPredicted RBP7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 SNRPEP62304 92 aaKnown RBP7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 POU2AF1Q16633 256 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 DPPA3Q6W0C5 159 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 NPBQ8NG41 125 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 ATP5SQ99766 215 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 KLK15Q9H2R5 256 aa7.49□□□□□ -1.21
HMGCLL1-206ENST00000428842 SORL1Q92673 2214 aa7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 PCP4L1A6NKN8 68 aa7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 RAB5AP20339 215 aa7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 RPL27AP46776 148 aaKnown RBP7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 S100A12P80511 92 aa7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 RUNX1Q01196 453 aa7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 SOHLH1Q5JUK2 328 aa7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 OR2T6Q8NHC8 308 aa7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 ISOC2Q96AB3 205 aa7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 P2RX4Q99571 388 aa7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 C20orf24Q9BUV8 137 aa7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 ZNF355PQ9NSJ1 428 aa7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 NOTCH1P46531 2555 aa7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 SRP19P09132 144 aaKnown RBP7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 PRB4P10163 310 aaPredicted RBP7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 GATA2P23769 480 aaPredicted RBP7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 TAS2R30P59541 319 aa7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 ZNF506Q5JVG8 444 aa7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 TCTEX1D1Q8N7M0 179 aa7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 ARPC1AQ92747 370 aa7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 MISP3Q96FF7 219 aa7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 FNDC4Q9H6D8 234 aaPredicted RBP7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 PLEKHA3Q9HB20 300 aa7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 VPREB3Q9UKI3 123 aa7.48□□□□□ -1.21
HMGCLL1-206ENST00000428842 A0A1W2PN81 502 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 CHRNA7P36544 502 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 PRCDQ00LT1 54 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 ICAM4Q14773 271 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 C1QL4Q86Z23 238 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 TEX45Q8NA69 505 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 RAB40CQ96S21 281 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 MOB4Q9Y3A3 225 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 TRAV1-1A0A0B4J248 108 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 A0A1B0GV50 99 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 OOSP1A8MZH6 123 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 HAX1O00165 279 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 DFFBO76075 338 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 SCAF4O95104 1147 aaKnown RBP7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 HSPB1P04792 205 aaKnown RBP7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 S100A8P05109 93 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 SPCS3P61009 180 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 UNQ5815/PRO19632Q6UWF5 114 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 C18orf65Q6ZTR6 163 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 ZNF429Q86V71 674 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 MMD2Q8IY49 270 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 FAM24BQ8N5W8 94 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 OR1L8Q8NGR8 309 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 PRNDQ9UKY0 176 aa7.47□□□□□ -1.21
HMGCLL1-206ENST00000428842 SMCO3A2RU48 225 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 OR2J3O76001 311 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 IGHV3-11P01762 117 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 HBE1P02100 147 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 SNRPCP09234 159 aaKnown RBP7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 RNASE2P10153 161 aaKnown RBP7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 RPL23AP62750 156 aaKnown RBP7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 ARSJQ5FYB0 599 aaPredicted RBP7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 AKR1C8PQ5T2L2 129 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 ZNF562Q6V9R5 426 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 STX12Q86Y82 276 aa7.46□□□□□ -1.22
HMGCLL1-206ENST00000428842 WNT10AQ9GZT5 417 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms