RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 OR7C2O60412 319 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 MOSP00540 346 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 RAB5AP20339 215 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 MAS1LP35410 378 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 MRPL41Q8IXM3 137 aaKnown RBP8.3□□□□□ -1.08
HDAC9-210ENST00000428307 RNF5Q99942 180 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 FUT9Q9Y231 359 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 YTHDF2Q9Y5A9 579 aaKnown RBP8.3□□□□□ -1.08
HDAC9-210ENST00000428307 LRRK2Q5S007 2527 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 CENPEQ02224 2701 aa8.3□□□□□ -1.08
HDAC9-210ENST00000428307 IGKV1D-37A0A075B6S9 117 aa8.29□□□□□ -1.08
HDAC9-210ENST00000428307 A0A087WWC5 75 aa8.29□□□□□ -1.08
HDAC9-210ENST00000428307 IGHV2-70DA0A0C4DH43 119 aa8.29□□□□□ -1.08
HDAC9-210ENST00000428307 NCBP2LA6PVI3 153 aaKnown RBP8.29□□□□□ -1.08
HDAC9-210ENST00000428307 MT-CO2P00403 227 aa8.29□□□□□ -1.08
HDAC9-210ENST00000428307 OR10J4P0C629 311 aa8.29□□□□□ -1.08
HDAC9-210ENST00000428307 RNF212Q495C1 297 aa8.29□□□□□ -1.08
HDAC9-210ENST00000428307 MORN5Q5VZ52 161 aa8.29□□□□□ -1.08
HDAC9-210ENST00000428307 UHRF2Q96PU4 802 aa8.29□□□□□ -1.08
HDAC9-210ENST00000428307 CCL19Q99731 98 aa8.29□□□□□ -1.08
HDAC9-210ENST00000428307 SSX3Q99909 188 aa8.29□□□□□ -1.08
HDAC9-210ENST00000428307 SIRPDQ9H106 197 aa8.29□□□□□ -1.08
HDAC9-210ENST00000428307 DMRT1Q9Y5R6 373 aa8.29□□□□□ -1.08
HDAC9-210ENST00000428307 TRAV5A0A0B4J249 113 aa8.29□□□□□ -1.08
HDAC9-210ENST00000428307 B4DEV8 164 aa8.29□□□□□ -1.08
HDAC9-210ENST00000428307 PDE6DO43924 150 aa8.29□□□□□ -1.08
HDAC9-210ENST00000428307 RPL23P62829 140 aaKnown RBP8.29□□□□□ -1.08
HDAC9-210ENST00000428307 ELOBQ15370 118 aa8.29□□□□□ -1.08
HDAC9-210ENST00000428307 OR1P1Q8NH06 330 aa8.29□□□□□ -1.08
HDAC9-210ENST00000428307 GSX1Q9H4S2 264 aaPredicted RBP8.29□□□□□ -1.08
HDAC9-210ENST00000428307 DNAJC4Q9NNZ3 241 aa8.29□□□□□ -1.08
HDAC9-210ENST00000428307 CELSR1Q9NYQ6 3014 aa8.29□□□□□ -1.08
HDAC9-210ENST00000428307 CELSR2Q9HCU4 2923 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 CLN5O75503 358 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 SNRPCP09234 159 aaKnown RBP8.28□□□□□ -1.08
HDAC9-210ENST00000428307 FLI1Q01543 452 aaPredicted RBP8.28□□□□□ -1.08
HDAC9-210ENST00000428307 HABP2Q14520 560 aaPredicted RBP8.28□□□□□ -1.08
HDAC9-210ENST00000428307 FXYD3Q14802 87 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 SMUG1Q53HV7 270 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 KIR3DL3Q8N743 410 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 OR4X1Q8NH49 305 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 Q8WTZ3 238 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 TBX15Q96SF7 602 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 WNT10AQ9GZT5 417 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 SAV1Q9H4B6 383 aaPredicted RBP8.28□□□□□ -1.08
HDAC9-210ENST00000428307 TNFRSF19Q9NS68 423 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 TECRQ9NZ01 308 aaKnown RBP8.28□□□□□ -1.08
HDAC9-210ENST00000428307 F11RQ9Y624 299 aaKnown RBP8.28□□□□□ -1.08
HDAC9-210ENST00000428307 TGIF2-C20orf24A0A0A6YYL0 155 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 SCO2A0A1W2PP80 73 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 TCRBV4S1A1TA0A5B7 111 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 PGPEP1LA6NFU8 196 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 CXCL1P09341 107 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 OR5G3P0C626 314 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 PDLIM4P50479 330 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 ETFRF1Q6IPR1 90 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 CCDC144NLQ6NUI1 221 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 ZNF114Q8NC26 417 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 OR2T10Q8NGZ9 312 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 ZNF503Q96F45 646 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 YPEL4Q96NS1 127 aa8.28□□□□□ -1.08
HDAC9-210ENST00000428307 C1orf196B1AJZ1 125 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 CLDN34H7C241 214 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 COX7A2P2O60397 106 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 ORM2P19652 201 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 RPS10P46783 165 aaKnown RBP8.27□□□□□ -1.09
HDAC9-210ENST00000428307 C5orf64Q2M2E5 130 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 KLF17Q5JT82 389 aaPredicted RBP8.27□□□□□ -1.09
HDAC9-210ENST00000428307 FAM168AQ92567 244 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 NRGNQ92686 78 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 PSMB11A5LHX3 300 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 CXorf65A6NEN9 183 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 CRYGCP07315 174 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 C8orf88P0DMB2 117 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 FOLR2P14207 255 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 ATP5J2P56134 94 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 MINOS1Q5TGZ0 78 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 C10orf113Q5VZT2 155 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 PATE2Q6UY27 113 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 THAP8Q8NA92 274 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 NECAP1Q8NC96 275 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 NPBQ8NG41 125 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 C19orf24Q9BVV8 132 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 MINOS1-NBL1R4GNA1 71 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 ZFHX3Q15911 3703 aa8.27□□□□□ -1.09
HDAC9-210ENST00000428307 IGHV4-61A0A0C4DH41 118 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 F6UZH7 168 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 NDUFA3O95167 84 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 HNF1AP20823 631 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 SAA4P35542 130 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 UBE2E1P51965 193 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 TAS2R45P59539 299 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 RAB5BP61020 215 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 CX3CL1P78423 397 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 FAM120AOSQ5T036 256 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 PVRIGQ6DKI7 326 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 C16orf82Q7Z2V1 217 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 TMEM116Q8NCL8 245 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 OR1B1Q8NGR6 318 aa8.26□□□□□ -1.09
HDAC9-210ENST00000428307 C22orf15Q8WYQ4 148 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms