RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 Q6ZS92 163 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 OR1B1Q8NGR6 318 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 WFDC12Q8WWY7 111 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 GRAMD2BQ96HH9 432 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 C19orf25Q9UFG5 118 aaPredicted RBP4.21□□□□□ -1.74
RIF1-203ENST00000428287 DUSP13Q9UII6 198 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 WASHC3Q9Y3C0 194 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 NTF3P20783 257 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 RNF151Q2KHN1 245 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 TCTEX1D4Q5JR98 221 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 PIP4P2Q8N4L2 257 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 C5orf17Q8NAS9 161 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 OR5A1Q8NGJ0 315 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 PPP1R35Q8TAP8 253 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 CACNG8Q8WXS5 425 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 FAM168AQ92567 244 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 C5orf30Q96GV9 206 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 POLDIP2Q9Y2S7 368 aa4.21□□□□□ -1.74
RIF1-203ENST00000428287 LINC00473A8K010 186 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 AMY1AP04745 511 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 C1orf61Q13536 156 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 Q56UQ5 140 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 CARD17Q5XLA6 110 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 ADAMTSL5Q6ZMM2 481 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 ANKRD37Q7Z713 158 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 OR9G4Q8NGQ1 327 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 CDX2Q99626 313 aaPredicted RBP4.2□□□□□ -1.74
RIF1-203ENST00000428287 IL23AQ9NPF7 189 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 ZNF355PQ9NSJ1 428 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 ZNF257Q9Y2Q1 563 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 VPS13CQ709C8 3753 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 EDDM3BP56851 147 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 TMEM97Q5BJF2 176 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 ZNF542PQ5EBM4 170 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 SHISA6Q6ZSJ9 500 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 TEX45Q8NA69 505 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 VSTM2AQ8TAG5 236 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 VGLL1Q99990 258 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 TMEM191AQ9H0A3 160 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 WDR54Q9H977 334 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 AP5S1Q9NUS5 200 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 A0A1W2PR80 420 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 GAGE10A6NGK3 116 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 A8MWL6 223 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 SYNGR1O43759 233 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 BCL3P20749 454 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 RPL8P62917 257 aaKnown RBP4.2□□□□□ -1.74
RIF1-203ENST00000428287 WIPI1Q5MNZ9 446 aaPredicted RBP4.2□□□□□ -1.74
RIF1-203ENST00000428287 PEAR1Q5VY43 1037 aaPredicted RBP4.2□□□□□ -1.74
RIF1-203ENST00000428287 PRR7Q8TB68 274 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 ANKRD30BLA7E2S9 258 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 GATA2P23769 480 aaPredicted RBP4.2□□□□□ -1.74
RIF1-203ENST00000428287 CSN1S1P47710 185 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 SYT13Q7L8C5 426 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 STPG3Q8N7X2 389 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 AMMECR1Q9Y4X0 333 aaPredicted RBP4.2□□□□□ -1.74
RIF1-203ENST00000428287 COL6A5A8TX70 2615 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 C19orf71A6NCJ1 209 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 APCSP02743 223 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 B4GALT1P15291 398 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 PRSS12P56730 875 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 BLNKQ8WV28 456 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 DDB2Q92466 427 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 ZNF747Q9BV97 191 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 COL25A1Q9BXS0 654 aaPredicted RBP4.2□□□□□ -1.74
RIF1-203ENST00000428287 MS4A5Q9H3V2 200 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 METTL7AQ9H8H3 244 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 TEX48A0A1B0GUV7 120 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 A0A1B0GV72 72 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 AGFG2O95081 481 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 HIST1H1EP10412 219 aaKnown RBP4.2□□□□□ -1.74
RIF1-203ENST00000428287 SLC35B1P78383 322 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 TMEM240Q5SV17 173 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 MIC13Q5XKP0 118 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 PARM1Q6UWI2 310 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 PLPPR2Q96GM1 343 aa4.2□□□□□ -1.74
RIF1-203ENST00000428287 ZNF331Q9NQX6 463 aaPredicted RBP4.2□□□□□ -1.74
RIF1-203ENST00000428287 FASNP49327 2511 aaKnown RBP4.19□□□□□ -1.74
RIF1-203ENST00000428287 SHISA9B4DS77 424 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 NXPH3O95157 252 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 C1orf185Q5T7R7 199 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 H2BFWTQ7Z2G1 175 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 OR10AG1Q8NH19 301 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 IL1F10Q8WWZ1 152 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 HIGD1BQ9P298 99 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 PPP1R3CQ9UQK1 317 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 VWFP04275 2813 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 IGHV1-24A0A0C4DH33 117 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 C12orf77C9JDV5 145 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 FOXL2P58012 376 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 CD300EQ496F6 205 aaPredicted RBP4.19□□□□□ -1.74
RIF1-203ENST00000428287 SSX8Q7RTT4 187 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 KIR3DL3Q8N743 410 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 OR4A16Q8NH70 328 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 OR4A5Q8NH83 315 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 FAM222BQ8WU58 562 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 TCF19Q9Y242 345 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 ADH4P08319 380 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 CT45A10P0DMU9 189 aa4.19□□□□□ -1.74
RIF1-203ENST00000428287 RELBQ01201 579 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms