RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 REG1AP05451 166 aa6.9□□□□□ -1.3
SMC1A-203ENST00000428014 RNASE2P10153 161 aaKnown RBP6.9□□□□□ -1.3
SMC1A-203ENST00000428014 GPR183P32249 361 aa6.9□□□□□ -1.3
SMC1A-203ENST00000428014 ADMP35318 185 aa6.9□□□□□ -1.3
SMC1A-203ENST00000428014 TNFRSF9Q07011 255 aa6.9□□□□□ -1.3
SMC1A-203ENST00000428014 SMCO1Q147U7 214 aa6.9□□□□□ -1.3
SMC1A-203ENST00000428014 SP6Q3SY56 376 aa6.9□□□□□ -1.3
SMC1A-203ENST00000428014 TRIQKQ629K1 86 aa6.9□□□□□ -1.3
SMC1A-203ENST00000428014 ZNF57Q68EA5 555 aaPredicted RBP6.9□□□□□ -1.3
SMC1A-203ENST00000428014 FAAP20Q6NZ36 180 aa6.9□□□□□ -1.3
SMC1A-203ENST00000428014 LINC00322Q6ZN03 302 aaPredicted RBP6.9□□□□□ -1.3
SMC1A-203ENST00000428014 Q6ZRM9 215 aa6.9□□□□□ -1.3
SMC1A-203ENST00000428014 SLC16A13Q7RTY0 426 aa6.9□□□□□ -1.3
SMC1A-203ENST00000428014 CENPSQ8N2Z9 138 aa6.9□□□□□ -1.3
SMC1A-203ENST00000428014 RNASE11Q8TAA1 199 aaKnown RBP6.9□□□□□ -1.3
SMC1A-203ENST00000428014 DYNLRB2Q8TF09 96 aa6.9□□□□□ -1.3
SMC1A-203ENST00000428014 CACNG8Q8WXS5 425 aa6.9□□□□□ -1.3
SMC1A-203ENST00000428014 CIB3Q96Q77 187 aaPredicted RBP6.9□□□□□ -1.3
SMC1A-203ENST00000428014 PRR25Q96S07 402 aa6.9□□□□□ -1.3
SMC1A-203ENST00000428014 GINS3Q9BRX5 216 aa6.9□□□□□ -1.3
SMC1A-203ENST00000428014 HINT2Q9BX68 163 aa6.9□□□□□ -1.3
SMC1A-203ENST00000428014 HIPK2Q9H2X6 1198 aa6.9□□□□□ -1.3
SMC1A-203ENST00000428014 A0A0G2JRQ6 117 aa6.89□□□□□ -1.31
SMC1A-203ENST00000428014 ZNF785A8K8V0 405 aa6.89□□□□□ -1.31
SMC1A-203ENST00000428014 PPP5D1E7EU14 171 aa6.89□□□□□ -1.31
SMC1A-203ENST00000428014 CLN5O75503 358 aa6.89□□□□□ -1.31
SMC1A-203ENST00000428014 MED6O75586 246 aa6.89□□□□□ -1.31
SMC1A-203ENST00000428014 SFT2D2O95562 160 aa6.89□□□□□ -1.31
SMC1A-203ENST00000428014 MT-CO2P00403 227 aa6.89□□□□□ -1.31
SMC1A-203ENST00000428014 AKR1C4P17516 323 aa6.89□□□□□ -1.31
SMC1A-203ENST00000428014 YPEL3P61236 119 aaPredicted RBP6.89□□□□□ -1.31
SMC1A-203ENST00000428014 CD300EQ496F6 205 aaPredicted RBP6.89□□□□□ -1.31
SMC1A-203ENST00000428014 LAMTOR1Q6IAA8 161 aa6.89□□□□□ -1.31
SMC1A-203ENST00000428014 ZNF600Q6ZNG1 722 aa6.89□□□□□ -1.31
SMC1A-203ENST00000428014 UXS1Q8NBZ7 420 aa6.89□□□□□ -1.31
SMC1A-203ENST00000428014 GPR146Q96CH1 333 aa6.89□□□□□ -1.31
SMC1A-203ENST00000428014 WWC2-AS2Q96NR7 200 aa6.89□□□□□ -1.31
SMC1A-203ENST00000428014 TM2D3Q9BRN9 247 aa6.89□□□□□ -1.31
SMC1A-203ENST00000428014 CACNG5Q9UF02 275 aa6.89□□□□□ -1.31
SMC1A-203ENST00000428014 GNG7O60262 68 aa6.88□□□□□ -1.31
SMC1A-203ENST00000428014 TMEM50AO95807 157 aa6.88□□□□□ -1.31
SMC1A-203ENST00000428014 IGHV4-30-4P0DP06 118 aa6.88□□□□□ -1.31
SMC1A-203ENST00000428014 GPX4P36969 197 aaPredicted RBP6.88□□□□□ -1.31
SMC1A-203ENST00000428014 INPP1P49441 399 aa6.88□□□□□ -1.31
SMC1A-203ENST00000428014 HOXA1P49639 335 aaPredicted RBP6.88□□□□□ -1.31
SMC1A-203ENST00000428014 RPP30P78346 268 aaKnown RBP6.88□□□□□ -1.31
SMC1A-203ENST00000428014 DEFA5Q01523 94 aa6.88□□□□□ -1.31
SMC1A-203ENST00000428014 Q56UQ5 140 aa6.88□□□□□ -1.31
SMC1A-203ENST00000428014 UNQ9165/PRO28630Q6UXU0 137 aa6.88□□□□□ -1.31
SMC1A-203ENST00000428014 C19orf35Q6ZS72 473 aa6.88□□□□□ -1.31
SMC1A-203ENST00000428014 SLC24A4Q8NFF2 622 aa6.88□□□□□ -1.31
SMC1A-203ENST00000428014 SDHCQ99643 169 aaPredicted RBP6.88□□□□□ -1.31
SMC1A-203ENST00000428014 TMEM231Q9H6L2 316 aa6.88□□□□□ -1.31
SMC1A-203ENST00000428014 VSIRQ9H7M9 311 aa6.88□□□□□ -1.31
SMC1A-203ENST00000428014 SEPSECSQ9HD40 501 aaKnown RBP6.88□□□□□ -1.31
SMC1A-203ENST00000428014 SMPXQ9UHP9 88 aa6.88□□□□□ -1.31
SMC1A-203ENST00000428014 TRAV14DV4A0A0A6YYC5 116 aa6.87□□□□□ -1.31
SMC1A-203ENST00000428014 A0A1W2PS18 150 aa6.87□□□□□ -1.31
SMC1A-203ENST00000428014 ZNF320A2RRD8 509 aa6.87□□□□□ -1.31
SMC1A-203ENST00000428014 OR2T8A6NH00 312 aa6.87□□□□□ -1.31
SMC1A-203ENST00000428014 UPK1BO75841 260 aa6.87□□□□□ -1.31
SMC1A-203ENST00000428014 SCAF4O95104 1147 aaKnown RBP6.87□□□□□ -1.31
SMC1A-203ENST00000428014 CFDP00746 253 aaPredicted RBP6.87□□□□□ -1.31
SMC1A-203ENST00000428014 FRMD6-AS1P0C7T7 363 aa6.87□□□□□ -1.31
SMC1A-203ENST00000428014 IL7P13232 177 aa6.87□□□□□ -1.31
SMC1A-203ENST00000428014 NPY1RP25929 384 aa6.87□□□□□ -1.31
SMC1A-203ENST00000428014 NUP62P37198 522 aaPredicted RBP6.87□□□□□ -1.31
SMC1A-203ENST00000428014 BAK1Q16611 211 aa6.87□□□□□ -1.31
SMC1A-203ENST00000428014 TMEM61Q8N0U2 210 aa6.87□□□□□ -1.31
SMC1A-203ENST00000428014 MISP3Q96FF7 219 aa6.87□□□□□ -1.31
SMC1A-203ENST00000428014 CHRDL1Q9BU40 450 aa6.87□□□□□ -1.31
SMC1A-203ENST00000428014 ZMAT4Q9H898 229 aa6.87□□□□□ -1.31
SMC1A-203ENST00000428014 HEYLQ9NQ87 328 aaPredicted RBP6.87□□□□□ -1.31
SMC1A-203ENST00000428014 MLXQ9UH92 298 aa6.87□□□□□ -1.31
SMC1A-203ENST00000428014 U3KQK5 164 aa6.87□□□□□ -1.31
SMC1A-203ENST00000428014 IGHV7-4-1A0A0J9YVY3 117 aa6.86□□□□□ -1.31
SMC1A-203ENST00000428014 OR4C46A6NHA9 309 aa6.86□□□□□ -1.31
SMC1A-203ENST00000428014 DFFBO76075 338 aa6.86□□□□□ -1.31
SMC1A-203ENST00000428014 CRYBB3P26998 211 aa6.86□□□□□ -1.31
SMC1A-203ENST00000428014 ID3Q02535 119 aa6.86□□□□□ -1.31
SMC1A-203ENST00000428014 IZUMO4Q1ZYL8 232 aa6.86□□□□□ -1.31
SMC1A-203ENST00000428014 RBPMS2Q6ZRY4 209 aaKnown RBP6.86□□□□□ -1.31
SMC1A-203ENST00000428014 LYZL2Q7Z4W2 148 aa6.86□□□□□ -1.31
SMC1A-203ENST00000428014 OR1S2Q8NGQ3 325 aa6.86□□□□□ -1.31
SMC1A-203ENST00000428014 COQ8AQ8NI60 647 aa6.86□□□□□ -1.31
SMC1A-203ENST00000428014 DTD1Q8TEA8 209 aa6.86□□□□□ -1.31
SMC1A-203ENST00000428014 ZNF414Q96IQ9 312 aa6.86□□□□□ -1.31
SMC1A-203ENST00000428014 NEURL2Q9BR09 285 aa6.86□□□□□ -1.31
SMC1A-203ENST00000428014 SPATA25Q9BR10 227 aa6.86□□□□□ -1.31
SMC1A-203ENST00000428014 FNDC4Q9H6D8 234 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-203ENST00000428014 PFDN2Q9UHV9 154 aa6.86□□□□□ -1.31
SMC1A-203ENST00000428014 KIR2DL5BA0A0G2JN68 375 aa6.85□□□□□ -1.31
SMC1A-203ENST00000428014 KIR2DL5BA0A0G2JPC4 375 aa6.85□□□□□ -1.31
SMC1A-203ENST00000428014 C9orf170A2RU37 121 aa6.85□□□□□ -1.31
SMC1A-203ENST00000428014 CEBPZOSA8MTT3 80 aa6.85□□□□□ -1.31
SMC1A-203ENST00000428014 FNDC10F2Z333 226 aa6.85□□□□□ -1.31
SMC1A-203ENST00000428014 IGKV1-17P01599 117 aa6.85□□□□□ -1.31
SMC1A-203ENST00000428014 IGHV3-23P01764 117 aa6.85□□□□□ -1.31
SMC1A-203ENST00000428014 FABP1P07148 127 aa6.85□□□□□ -1.31
SMC1A-203ENST00000428014 OR4E1P0C645 316 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms