RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 A8MWP6 167 aa8.83□□□□□ -1
TCOF1-204ENST00000427724 SERF2P84101 59 aa8.83□□□□□ -1
TCOF1-204ENST00000427724 ATP6V1FQ16864 119 aa8.83□□□□□ -1
TCOF1-204ENST00000427724 VMO1Q7Z5L0 202 aa8.83□□□□□ -1
TCOF1-204ENST00000427724 ZBTB34Q8NCN2 500 aa8.83□□□□□ -1
TCOF1-204ENST00000427724 OR4B1Q8NGF8 309 aa8.83□□□□□ -1
TCOF1-204ENST00000427724 TAF15Q92804 592 aaKnown RBP eCLIP8.83□□□□□ -1
TCOF1-204ENST00000427724 TMEM133Q9H2Q1 129 aa8.83□□□□□ -1
TCOF1-204ENST00000427724 OR2J3O76001 311 aa8.82□□□□□ -1
TCOF1-204ENST00000427724 IGKV3-15P01624 115 aa8.82□□□□□ -1
TCOF1-204ENST00000427724 UCP1P25874 307 aa8.82□□□□□ -1
TCOF1-204ENST00000427724 KIAA1644Q3SXP7 199 aa8.82□□□□□ -1
TCOF1-204ENST00000427724 VKORC1L1Q8N0U8 176 aa8.82□□□□□ -1
TCOF1-204ENST00000427724 RPUSD1Q9UJJ7 312 aaKnown RBP8.82□□□□□ -1
TCOF1-204ENST00000427724 CTXND1A0A1B0GTU2 59 aa8.82□□□□□ -1
TCOF1-204ENST00000427724 LRRC75BQ2VPJ9 315 aa8.82□□□□□ -1
TCOF1-204ENST00000427724 SLC35E4Q6ICL7 350 aa8.82□□□□□ -1
TCOF1-204ENST00000427724 RCC1LQ96I51 464 aaKnown RBP8.82□□□□□ -1
TCOF1-204ENST00000427724 SNHG12Q9BXW3 62 aa8.82□□□□□ -1
TCOF1-204ENST00000427724 SDF2L1Q9HCN8 221 aa8.82□□□□□ -1
TCOF1-204ENST00000427724 IGHV3OR16-8A0A075B7F1 116 aa8.81□□□□□ -1
TCOF1-204ENST00000427724 MARCH11A6NNE9 402 aa8.81□□□□□ -1
TCOF1-204ENST00000427724 NPIPB11E5RHQ5 1161 aa8.81□□□□□ -1
TCOF1-204ENST00000427724 NPY1RP25929 384 aa8.81□□□□□ -1
TCOF1-204ENST00000427724 MBNL2Q5VZF2 373 aaKnown RBP8.81□□□□□ -1
TCOF1-204ENST00000427724 WDR61Q9GZS3 305 aaKnown RBP8.81□□□□□ -1
TCOF1-204ENST00000427724 NCOA6Q14686 2063 aaPredicted RBP8.81□□□□□ -1
TCOF1-204ENST00000427724 F8P00451 2351 aa8.81□□□□□ -1
TCOF1-204ENST00000427724 WNT2P09544 360 aa8.81□□□□□ -1
TCOF1-204ENST00000427724 PLA2G2AP14555 144 aa8.81□□□□□ -1
TCOF1-204ENST00000427724 LYPD2Q6UXB3 125 aa8.81□□□□□ -1
TCOF1-204ENST00000427724 GTF2H5Q6ZYL4 71 aa8.81□□□□□ -1
TCOF1-204ENST00000427724 FAM110DQ8TAY7 271 aaPredicted RBP8.81□□□□□ -1
TCOF1-204ENST00000427724 IMMP2LQ96T52 175 aa8.81□□□□□ -1
TCOF1-204ENST00000427724 IGHV3-23P01764 117 aa8.81□□□□□ -1
TCOF1-204ENST00000427724 CBLN1P23435 193 aa8.81□□□□□ -1
TCOF1-204ENST00000427724 CAMPP49913 170 aa8.81□□□□□ -1
TCOF1-204ENST00000427724 OR4A47Q6IF82 309 aa8.81□□□□□ -1
TCOF1-204ENST00000427724 ZNF329Q86UD4 541 aa8.81□□□□□ -1
TCOF1-204ENST00000427724 UQCR10Q9UDW1 63 aa8.81□□□□□ -1
TCOF1-204ENST00000427724 SRRM5B3KS81 715 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 ZNF207O43670 478 aaKnown RBP8.8□□□□□ -1
TCOF1-204ENST00000427724 KBTBD11O94819 623 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 NPSP0C0P6 89 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 ZNF137PP52743 207 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 OR1L4Q8NGR5 311 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 TIMM23O14925 209 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 S1PR2O95136 353 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 MOSP00540 346 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 PPP1R27Q86WC6 154 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 BEND2Q8NDZ0 799 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 WNT10AQ9GZT5 417 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 LIME1Q9H400 295 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 A0A0G2JLM5 398 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 K7ERU9 68 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 LILRA1O75019 489 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 RUSC1-AS1Q66K80 236 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 OR4D5Q8NGN0 318 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 M0R2Z0 102 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 OR4P4Q8NGL7 312 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 PLSCR2Q9NRY7 297 aa8.8□□□□□ -1
TCOF1-204ENST00000427724 TRANK1O15050 2925 aa8.79□□□□□ -1
TCOF1-204ENST00000427724 IGKV3-20P01619 116 aa8.79□□□□□ -1
TCOF1-204ENST00000427724 HIST3H3Q16695 136 aa8.79□□□□□ -1
TCOF1-204ENST00000427724 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.79□□□□□ -1
TCOF1-204ENST00000427724 TMEM56-RWDD3S4R434 201 aa8.79□□□□□ -1
TCOF1-204ENST00000427724 NPFFO15130 113 aa8.79□□□□□ -1
TCOF1-204ENST00000427724 LYL1P12980 280 aa8.79□□□□□ -1
TCOF1-204ENST00000427724 ANOS1P23352 680 aa8.79□□□□□ -1
TCOF1-204ENST00000427724 RPL24P83731 157 aaKnown RBP8.79□□□□□ -1
TCOF1-204ENST00000427724 MIEN1Q9BRT3 115 aa8.79□□□□□ -1
TCOF1-204ENST00000427724 MRPL18Q9H0U6 180 aaKnown RBP8.79□□□□□ -1
TCOF1-204ENST00000427724 GNG4P50150 75 aa8.79□□□□□ -1
TCOF1-204ENST00000427724 TCF23Q7RTU1 214 aa8.79□□□□□ -1
TCOF1-204ENST00000427724 MRPL20Q9BYC9 149 aaKnown RBP8.79□□□□□ -1
TCOF1-204ENST00000427724 DENND4AQ7Z401 1863 aa8.79□□□□□ -1
TCOF1-204ENST00000427724 A0A1W2PS18 150 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 TDGF1P3P51864 188 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 TMEM249Q2WGJ8 235 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 EBLN2Q6P2I7 272 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 CYP2G1PQ6ZSU1 146 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 LRTM2Q8N967 370 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 IGHV4-30-2A0A087WSY4 118 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 ID1P41134 155 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 MFAP4P55083 255 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 GBGT1Q8N5D6 347 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 METTL26Q96S19 204 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 C19orf84I3L1E1 186 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 OTX1P32242 354 aaPredicted RBP8.78□□□□□ -1
TCOF1-204ENST00000427724 ID3Q02535 119 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 PSG5Q15238 335 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 TM4SF20Q53R12 229 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 TEX38Q6PEX7 206 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 ZNF645Q8N7E2 425 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 PLPPR1Q8TBJ4 325 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 TMEM140Q9NV12 185 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 DSCAMO60469 2012 aa8.78□□□□□ -1
TCOF1-204ENST00000427724 TRBV24-1A0A075B6N3 115 aa8.77□□□□□ -1
TCOF1-204ENST00000427724 PSMB11A5LHX3 300 aa8.77□□□□□ -1
TCOF1-204ENST00000427724 CGB1A6NKQ9 187 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms