RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 TRBV24-1A0A075B6N3 115 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 A0A1W2PRD5 423 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 A0A1W2PRF3 423 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 A0A1W2PRM7 423 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 PSMB11A5LHX3 300 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 ODF3BA8MYP8 253 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 TEX22C9J3V5 150 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 AP4M1O00189 453 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 IGHV2-5P01817 119 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 C8orf88P0DMB2 117 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 S100PP25815 95 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 FABP9Q0Z7S8 132 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 PVRIGQ6DKI7 326 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 SRSF12Q8WXF0 261 aaKnown RBP11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 RNF2Q99496 336 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 SLC25A33Q9BSK2 321 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 DNAJC4Q9NNZ3 241 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 ARL2-SNX15V9GYD0 113 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 PGPEP1LA6NFU8 196 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 FCN1O00602 326 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 TRGC2P03986 189 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 PFN1P07737 140 aaKnown RBP11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 MMDQ15546 238 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 VMO1Q7Z5L0 202 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 OR1L4Q8NGR5 311 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 OR1P1Q8NH06 330 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 IGFBPL1Q8WX77 278 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 ELOVL1Q9BW60 279 aa11.19□□□□□ -0.62
APOBEC3D-202ENST00000427494 TRBV20OR9-2A0A075B6H5 130 aa11.18□□□□□ -0.62
APOBEC3D-202ENST00000427494 OR10J4P0C629 311 aa11.18□□□□□ -0.62
APOBEC3D-202ENST00000427494 ZFP36P26651 326 aaKnown RBP11.18□□□□□ -0.62
APOBEC3D-202ENST00000427494 EFNA4P52798 201 aa11.18□□□□□ -0.62
APOBEC3D-202ENST00000427494 BPIFB3P59826 476 aa11.18□□□□□ -0.62
APOBEC3D-202ENST00000427494 SELENOTP62341 195 aa11.18□□□□□ -0.62
APOBEC3D-202ENST00000427494 MORN5Q5VZ52 161 aa11.18□□□□□ -0.62
APOBEC3D-202ENST00000427494 C10orf113Q5VZT2 155 aa11.18□□□□□ -0.62
APOBEC3D-202ENST00000427494 OR4X1Q8NH49 305 aa11.18□□□□□ -0.62
APOBEC3D-202ENST00000427494 C22orf15Q8WYQ4 148 aa11.18□□□□□ -0.62
APOBEC3D-202ENST00000427494 CFHR4Q92496 578 aa11.18□□□□□ -0.62
APOBEC3D-202ENST00000427494 C11orf52Q96A22 123 aa11.18□□□□□ -0.62
APOBEC3D-202ENST00000427494 PFDN5Q99471 154 aa11.18□□□□□ -0.62
APOBEC3D-202ENST00000427494 SLC25A2Q9BXI2 301 aa11.18□□□□□ -0.62
APOBEC3D-202ENST00000427494 F11RQ9Y624 299 aaKnown RBP11.18□□□□□ -0.62
APOBEC3D-202ENST00000427494 IGHV3-21A0A0B4J1V1 117 aa11.17□□□□□ -0.62
APOBEC3D-202ENST00000427494 TRAV5A0A0B4J249 113 aa11.17□□□□□ -0.62
APOBEC3D-202ENST00000427494 TMEM8BA6NDV4 472 aa11.17□□□□□ -0.62
APOBEC3D-202ENST00000427494 TGOLN2O43493 480 aa11.17□□□□□ -0.62
APOBEC3D-202ENST00000427494 MOSP00540 346 aa11.17□□□□□ -0.62
APOBEC3D-202ENST00000427494 CRYGCP07315 174 aa11.17□□□□□ -0.62
APOBEC3D-202ENST00000427494 RUSC1-AS1Q66K80 236 aa11.17□□□□□ -0.62
APOBEC3D-202ENST00000427494 KIR3DL3Q8N743 410 aa11.17□□□□□ -0.62
APOBEC3D-202ENST00000427494 CORTO00230 105 aa11.17□□□□□ -0.62
APOBEC3D-202ENST00000427494 NBR2O15453 112 aa11.17□□□□□ -0.62
APOBEC3D-202ENST00000427494 CNIH1O95406 144 aa11.17□□□□□ -0.62
APOBEC3D-202ENST00000427494 HNF1AP20823 631 aa11.17□□□□□ -0.62
APOBEC3D-202ENST00000427494 CD24P25063 80 aa11.17□□□□□ -0.62
APOBEC3D-202ENST00000427494 LGALS4P56470 323 aa11.17□□□□□ -0.62
APOBEC3D-202ENST00000427494 OR5AU1Q8NGC0 362 aa11.17□□□□□ -0.62
APOBEC3D-202ENST00000427494 FAM167A-AS1Q96KT0 104 aa11.17□□□□□ -0.62
APOBEC3D-202ENST00000427494 TNFRSF19Q9NS68 423 aa11.17□□□□□ -0.62
APOBEC3D-202ENST00000427494 MDFIC2A0A1B0GVS7 189 aa11.16□□□□□ -0.62
APOBEC3D-202ENST00000427494 CD99P14209 185 aa11.16□□□□□ -0.62
APOBEC3D-202ENST00000427494 HOXB4P17483 251 aaPredicted RBP11.16□□□□□ -0.62
APOBEC3D-202ENST00000427494 SRP14P37108 136 aaKnown RBP11.16□□□□□ -0.62
APOBEC3D-202ENST00000427494 UBE2L3P68036 154 aaKnown RBP11.16□□□□□ -0.62
APOBEC3D-202ENST00000427494 LCN2P80188 198 aa11.16□□□□□ -0.62
APOBEC3D-202ENST00000427494 HES1Q14469 280 aa11.16□□□□□ -0.62
APOBEC3D-202ENST00000427494 CLEC12BQ2HXU8 276 aa11.16□□□□□ -0.62
APOBEC3D-202ENST00000427494 PATE2Q6UY27 113 aa11.16□□□□□ -0.62
APOBEC3D-202ENST00000427494 C1orf122Q6ZSJ8 110 aa11.16□□□□□ -0.62
APOBEC3D-202ENST00000427494 ZNF355PQ9NSJ1 428 aa11.16□□□□□ -0.62
APOBEC3D-202ENST00000427494 SPTBN1Q01082 2364 aaKnown RBP11.16□□□□□ -0.62
APOBEC3D-202ENST00000427494 A0A1W2PPQ1 181 aa11.16□□□□□ -0.62
APOBEC3D-202ENST00000427494 NDUFA6P56556 154 aa11.16□□□□□ -0.62
APOBEC3D-202ENST00000427494 SFRP2Q96HF1 295 aa11.16□□□□□ -0.62
APOBEC3D-202ENST00000427494 TRGV9Q99603 122 aa11.16□□□□□ -0.62
APOBEC3D-202ENST00000427494 PYGO2Q9BRQ0 406 aa11.16□□□□□ -0.62
APOBEC3D-202ENST00000427494 DMRT1Q9Y5R6 373 aa11.16□□□□□ -0.62
APOBEC3D-202ENST00000427494 PPP1R2P9O14990 202 aa11.15□□□□□ -0.62
APOBEC3D-202ENST00000427494 HIST1H2BKO60814 126 aa11.15□□□□□ -0.62
APOBEC3D-202ENST00000427494 HIST1H2BJP06899 126 aa11.15□□□□□ -0.62
APOBEC3D-202ENST00000427494 HIST1H2BOP23527 126 aa11.15□□□□□ -0.62
APOBEC3D-202ENST00000427494 HIST1H2BBP33778 126 aa11.15□□□□□ -0.62
APOBEC3D-202ENST00000427494 HIST1H2BDP58876 126 aa11.15□□□□□ -0.62
APOBEC3D-202ENST00000427494 HIST1H2BCP62807 126 aa11.15□□□□□ -0.62
APOBEC3D-202ENST00000427494 SSX2Q16385 188 aa11.15□□□□□ -0.62
APOBEC3D-202ENST00000427494 HIST2H2BEQ16778 126 aa11.15□□□□□ -0.62
APOBEC3D-202ENST00000427494 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.15□□□□□ -0.62
APOBEC3D-202ENST00000427494 KCNIP4Q6PIL6 250 aa11.15□□□□□ -0.62
APOBEC3D-202ENST00000427494 TMEM116Q8NCL8 245 aa11.15□□□□□ -0.62
APOBEC3D-202ENST00000427494 NPBQ8NG41 125 aa11.15□□□□□ -0.62
APOBEC3D-202ENST00000427494 OCC1Q8TAD7 63 aa11.15□□□□□ -0.62
APOBEC3D-202ENST00000427494 HIST1H2BHQ93079 126 aa11.15□□□□□ -0.62
APOBEC3D-202ENST00000427494 EAF1Q96JC9 268 aaPredicted RBP11.15□□□□□ -0.62
APOBEC3D-202ENST00000427494 HIST1H2BNQ99877 126 aa11.15□□□□□ -0.62
APOBEC3D-202ENST00000427494 HIST1H2BMQ99879 126 aa11.15□□□□□ -0.62
APOBEC3D-202ENST00000427494 A0A1W2PRE2 83 aa11.14□□□□□ -0.63
APOBEC3D-202ENST00000427494 GGTLC3B5MD39 225 aa11.14□□□□□ -0.63
APOBEC3D-202ENST00000427494 C9JCJ5 164 aa11.14□□□□□ -0.63
APOBEC3D-202ENST00000427494 NDUFA3O95167 84 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms