RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 EXTL2Q9UBQ6 330 aa7.49□□□□□ -1.21
HDLBP-213ENST00000427007 ST8SIA3O43173 380 aa7.48□□□□□ -1.21
HDLBP-213ENST00000427007 PTTG1O95997 202 aa7.48□□□□□ -1.21
HDLBP-213ENST00000427007 CA1P00915 261 aaPredicted RBP7.48□□□□□ -1.21
HDLBP-213ENST00000427007 IL7P13232 177 aa7.48□□□□□ -1.21
HDLBP-213ENST00000427007 ELK1P19419 428 aa7.48□□□□□ -1.21
HDLBP-213ENST00000427007 DEFB131AP59861 70 aa7.48□□□□□ -1.21
HDLBP-213ENST00000427007 PAFAH1B2P68402 229 aa7.48□□□□□ -1.21
HDLBP-213ENST00000427007 RBMS2Q15434 407 aaKnown RBP7.48□□□□□ -1.21
HDLBP-213ENST00000427007 LPCAT3Q6P1A2 487 aa7.48□□□□□ -1.21
HDLBP-213ENST00000427007 TOMM20LQ6UXN7 152 aa7.48□□□□□ -1.21
HDLBP-213ENST00000427007 LILRB2Q8N423 598 aa7.48□□□□□ -1.21
HDLBP-213ENST00000427007 FAM24BQ8N5W8 94 aa7.48□□□□□ -1.21
HDLBP-213ENST00000427007 ZNF114Q8NC26 417 aa7.48□□□□□ -1.21
HDLBP-213ENST00000427007 GPX8Q8TED1 209 aa7.48□□□□□ -1.21
HDLBP-213ENST00000427007 SDHCQ99643 169 aaPredicted RBP7.48□□□□□ -1.21
HDLBP-213ENST00000427007 GINS3Q9BRX5 216 aa7.48□□□□□ -1.21
HDLBP-213ENST00000427007 LINC00854A0A1B0GVQ3 168 aa7.47□□□□□ -1.21
HDLBP-213ENST00000427007 DNASE2O00115 360 aaPredicted RBP7.47□□□□□ -1.21
HDLBP-213ENST00000427007 DFFBO76075 338 aa7.47□□□□□ -1.21
HDLBP-213ENST00000427007 IFNA4P05014 189 aa7.47□□□□□ -1.21
HDLBP-213ENST00000427007 HSPE1P61604 102 aaKnown RBP7.47□□□□□ -1.21
HDLBP-213ENST00000427007 RPL11P62913 178 aaKnown RBP7.47□□□□□ -1.21
HDLBP-213ENST00000427007 ERHP84090 104 aaKnown RBP7.47□□□□□ -1.21
HDLBP-213ENST00000427007 ZNF79Q15937 498 aa7.47□□□□□ -1.21
HDLBP-213ENST00000427007 BAK1Q16611 211 aa7.47□□□□□ -1.21
HDLBP-213ENST00000427007 RNASE12Q5GAN4 147 aaKnown RBP7.47□□□□□ -1.21
HDLBP-213ENST00000427007 PPP1R14BQ96C90 147 aa7.47□□□□□ -1.21
HDLBP-213ENST00000427007 MFFQ9GZY8 342 aa7.47□□□□□ -1.21
HDLBP-213ENST00000427007 MS4A6AQ9H2W1 248 aa7.47□□□□□ -1.21
HDLBP-213ENST00000427007 C11orf68Q9H3H3 251 aaKnown RBP7.47□□□□□ -1.21
HDLBP-213ENST00000427007 ZFAND3Q9H8U3 227 aa7.47□□□□□ -1.21
HDLBP-213ENST00000427007 FAM212BQ9NTI7 297 aaPredicted RBP7.47□□□□□ -1.21
HDLBP-213ENST00000427007 RABL2AQ9UBK7 228 aaPredicted RBP7.47□□□□□ -1.21
HDLBP-213ENST00000427007 RABL2BQ9UNT1 228 aa7.47□□□□□ -1.21
HDLBP-213ENST00000427007 PUS1Q9Y606 427 aaKnown RBP eCLIP7.47□□□□□ -1.21
HDLBP-213ENST00000427007 A0A1B0GU03 582 aa7.46□□□□□ -1.22
HDLBP-213ENST00000427007 M0QYG6 137 aa7.46□□□□□ -1.22
HDLBP-213ENST00000427007 PI3P19957 117 aa7.46□□□□□ -1.22
HDLBP-213ENST00000427007 RCVRNP35243 200 aa7.46□□□□□ -1.22
HDLBP-213ENST00000427007 BCAP31P51572 246 aa7.46□□□□□ -1.22
HDLBP-213ENST00000427007 PRR20EP86478 221 aa7.46□□□□□ -1.22
HDLBP-213ENST00000427007 PRR20CP86479 221 aa7.46□□□□□ -1.22
HDLBP-213ENST00000427007 PRR20DP86480 221 aa7.46□□□□□ -1.22
HDLBP-213ENST00000427007 PRR20BP86481 221 aa7.46□□□□□ -1.22
HDLBP-213ENST00000427007 PRR20AP86496 221 aa7.46□□□□□ -1.22
HDLBP-213ENST00000427007 TMEM187Q14656 261 aa7.46□□□□□ -1.22
HDLBP-213ENST00000427007 MZT2BQ6NZ67 158 aa7.46□□□□□ -1.22
HDLBP-213ENST00000427007 ZNF600Q6ZNG1 722 aa7.46□□□□□ -1.22
HDLBP-213ENST00000427007 SLC35G3Q8N808 338 aa7.46□□□□□ -1.22
HDLBP-213ENST00000427007 DUSP18Q8NEJ0 188 aa7.46□□□□□ -1.22
HDLBP-213ENST00000427007 SOSTQ9BQB4 213 aa7.46□□□□□ -1.22
HDLBP-213ENST00000427007 VSIRQ9H7M9 311 aa7.46□□□□□ -1.22
HDLBP-213ENST00000427007 RABAC1Q9UI14 185 aa7.46□□□□□ -1.22
HDLBP-213ENST00000427007 TMEM50AO95807 157 aa7.45□□□□□ -1.22
HDLBP-213ENST00000427007 IFNA17P01571 189 aa7.45□□□□□ -1.22
HDLBP-213ENST00000427007 IGKV1-5P01602 117 aa7.45□□□□□ -1.22
HDLBP-213ENST00000427007 PGAM2P15259 253 aa7.45□□□□□ -1.22
HDLBP-213ENST00000427007 SNCAP37840 140 aa7.45□□□□□ -1.22
HDLBP-213ENST00000427007 NPBWR1P48145 328 aa7.45□□□□□ -1.22
HDLBP-213ENST00000427007 AKR1C2P52895 323 aa7.45□□□□□ -1.22
HDLBP-213ENST00000427007 UCP3P55916 312 aa7.45□□□□□ -1.22
HDLBP-213ENST00000427007 ASAH1Q13510 395 aa7.45□□□□□ -1.22
HDLBP-213ENST00000427007 STHQ8IWL8 128 aa7.45□□□□□ -1.22
HDLBP-213ENST00000427007 C2CD4CQ8TF44 421 aa7.45□□□□□ -1.22
HDLBP-213ENST00000427007 TP53RKQ96S44 253 aa7.45□□□□□ -1.22
HDLBP-213ENST00000427007 SCPEP1Q9HB40 452 aa7.45□□□□□ -1.22
HDLBP-213ENST00000427007 MRPL36Q9P0J6 103 aaKnown RBP7.45□□□□□ -1.22
HDLBP-213ENST00000427007 IGLL5B9A064 214 aa7.44□□□□□ -1.22
HDLBP-213ENST00000427007 CD5P06127 495 aa7.44□□□□□ -1.22
HDLBP-213ENST00000427007 HNRNPCP07910 306 aaKnown RBP eCLIP7.44□□□□□ -1.22
HDLBP-213ENST00000427007 RNASE2P10153 161 aaKnown RBP7.44□□□□□ -1.22
HDLBP-213ENST00000427007 HOXA1P49639 335 aaPredicted RBP7.44□□□□□ -1.22
HDLBP-213ENST00000427007 PIGPP57054 158 aa7.44□□□□□ -1.22
HDLBP-213ENST00000427007 MLANAQ16655 118 aa7.44□□□□□ -1.22
HDLBP-213ENST00000427007 STXBP6Q8NFX7 210 aa7.44□□□□□ -1.22
HDLBP-213ENST00000427007 ENKURQ8TC29 256 aa7.44□□□□□ -1.22
HDLBP-213ENST00000427007 C15orf40Q8WUR7 153 aa7.44□□□□□ -1.22
HDLBP-213ENST00000427007 PDCD10Q9BUL8 212 aa7.44□□□□□ -1.22
HDLBP-213ENST00000427007 TBC1D24Q9ULP9 559 aa7.44□□□□□ -1.22
HDLBP-213ENST00000427007 DNAH10Q8IVF4 4471 aa7.44□□□□□ -1.22
HDLBP-213ENST00000427007 TRAV2A0A0B4J234 112 aa7.43□□□□□ -1.22
HDLBP-213ENST00000427007 A0A0B4J293 547 aa7.43□□□□□ -1.22
HDLBP-213ENST00000427007 IGHV4-28A0A0C4DH34 117 aa7.43□□□□□ -1.22
HDLBP-213ENST00000427007 C3orf85A0A1B0GTC6 90 aa7.43□□□□□ -1.22
HDLBP-213ENST00000427007 KNCNA6PVL3 124 aa7.43□□□□□ -1.22
HDLBP-213ENST00000427007 CENPXA8MT69 81 aa7.43□□□□□ -1.22
HDLBP-213ENST00000427007 P0C879 139 aa7.43□□□□□ -1.22
HDLBP-213ENST00000427007 NPPCP23582 126 aa7.43□□□□□ -1.22
HDLBP-213ENST00000427007 OPRK1P41145 380 aa7.43□□□□□ -1.22
HDLBP-213ENST00000427007 RND3P61587 244 aa7.43□□□□□ -1.22
HDLBP-213ENST00000427007 SP6Q3SY56 376 aa7.43□□□□□ -1.22
HDLBP-213ENST00000427007 Q8NAQ8 132 aa7.43□□□□□ -1.22
HDLBP-213ENST00000427007 FNDC4Q9H6D8 234 aaPredicted RBP7.43□□□□□ -1.22
HDLBP-213ENST00000427007 TMEM231Q9H6L2 316 aa7.43□□□□□ -1.22
HDLBP-213ENST00000427007 KLK11Q9UBX7 282 aa7.43□□□□□ -1.22
HDLBP-213ENST00000427007 APLNQ9ULZ1 77 aa7.43□□□□□ -1.22
HDLBP-213ENST00000427007 A0A0G2JRQ6 117 aa7.42□□□□□ -1.22
HDLBP-213ENST00000427007 FAM240BA0A1B0GVZ2 78 aa7.42□□□□□ -1.22
HDLBP-213ENST00000427007 A0A1W2PS18 150 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms