RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 C15orf32Q32M92 178 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 C2orf83Q53S99 150 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 ZBTB8BQ8NAP8 495 aaPredicted RBP5.69□□□□□ -1.5
LINC01049-201ENST00000426840 UXS1Q8NBZ7 420 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 CLRN3Q8NCR9 226 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 ZNF502Q8TBZ5 544 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 VN1R17PQ8TDU5 208 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 SCARB1Q8WTV0 552 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 DPF1Q92782 380 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 GPN1Q9HCN4 374 aaPredicted RBP5.69□□□□□ -1.5
LINC01049-201ENST00000426840 RANGRFQ9HD47 186 aaPredicted RBP5.69□□□□□ -1.5
LINC01049-201ENST00000426840 ENY2Q9NPA8 101 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 HEYLQ9NQ87 328 aaPredicted RBP5.69□□□□□ -1.5
LINC01049-201ENST00000426840 THYN1Q9P016 225 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 PEF1Q9UBV8 284 aaKnown RBP5.69□□□□□ -1.5
LINC01049-201ENST00000426840 S4R3C0 116 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 NOTCH3Q9UM47 2321 aa5.69□□□□□ -1.5
LINC01049-201ENST00000426840 TRBV7-1A0A0A6YYK4 115 aa5.68□□□□□ -1.5
LINC01049-201ENST00000426840 IGHV3-21A0A0B4J1V1 117 aa5.68□□□□□ -1.5
LINC01049-201ENST00000426840 CYB5BO43169 146 aa5.68□□□□□ -1.5
LINC01049-201ENST00000426840 SYNGR2O43760 224 aa5.68□□□□□ -1.5
LINC01049-201ENST00000426840 CLEC3BP05452 202 aa5.68□□□□□ -1.5
LINC01049-201ENST00000426840 HTR2BP41595 481 aa5.68□□□□□ -1.5
LINC01049-201ENST00000426840 SUB1P53999 127 aaKnown RBP eCLIP5.68□□□□□ -1.5
LINC01049-201ENST00000426840 KLF5Q13887 457 aaPredicted RBP5.68□□□□□ -1.5
LINC01049-201ENST00000426840 IAH1Q2TAA2 248 aaPredicted RBP5.68□□□□□ -1.5
LINC01049-201ENST00000426840 CLEC19AQ6UXS0 136 aa5.68□□□□□ -1.5
LINC01049-201ENST00000426840 DTD1Q8TEA8 209 aa5.68□□□□□ -1.5
LINC01049-201ENST00000426840 DCUN1D4Q92564 292 aa5.68□□□□□ -1.5
LINC01049-201ENST00000426840 DLX4Q92988 240 aaPredicted RBP5.68□□□□□ -1.5
LINC01049-201ENST00000426840 EEF1AKMT3Q96AZ1 226 aa5.68□□□□□ -1.5
LINC01049-201ENST00000426840 CXorf58Q96LI9 332 aa5.68□□□□□ -1.5
LINC01049-201ENST00000426840 C2orf50Q96LR7 162 aa5.68□□□□□ -1.5
LINC01049-201ENST00000426840 MAGT1Q9H0U3 335 aa5.68□□□□□ -1.5
LINC01049-201ENST00000426840 HIPK2Q9H2X6 1198 aa5.68□□□□□ -1.5
LINC01049-201ENST00000426840 FNDC4Q9H6D8 234 aaPredicted RBP5.68□□□□□ -1.5
LINC01049-201ENST00000426840 C7orf66A4D0T2 115 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 C15orf62A8K5M9 175 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 BMPR1BO00238 502 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 WRBO00258 174 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 MED6O75586 246 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 SIX6O95475 246 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 TMEM50AO95807 157 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 MT-CO2P00403 227 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 IGHV3-48P01763 117 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 MBPP02686 304 aaPredicted RBP5.67□□□□□ -1.5
LINC01049-201ENST00000426840 OR8U8P0C7N1 319 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 IAPPP10997 89 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 FCGR2BP31994 310 aaPredicted RBP5.67□□□□□ -1.5
LINC01049-201ENST00000426840 NKX2-1P43699 371 aaPredicted RBP5.67□□□□□ -1.5
LINC01049-201ENST00000426840 PAX9P55771 341 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 ATP5IP56385 69 aaPredicted RBP5.67□□□□□ -1.5
LINC01049-201ENST00000426840 POLR2GP62487 172 aaKnown RBP eCLIP5.67□□□□□ -1.5
LINC01049-201ENST00000426840 OXA1LQ15070 435 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 FAM209BQ5JX69 171 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 SLC24A4Q8NFF2 622 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 ZNF414Q96IQ9 312 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 ATP6V0BQ99437 205 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 C21orf62Q9NYP8 219 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 MRPL36Q9P0J6 103 aaKnown RBP5.67□□□□□ -1.5
LINC01049-201ENST00000426840 GSKIPQ9P0R6 139 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 U3KQ87 197 aa5.67□□□□□ -1.5
LINC01049-201ENST00000426840 C5orf51A6NDU8 294 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 FAM25EA8MYX2 175 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 PPP5D1E7EU14 171 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 CORTO00230 105 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 OVOL1O14753 267 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 GGCTO75223 188 aaKnown RBP5.66□□□□□ -1.5
LINC01049-201ENST00000426840 OR2C1O95371 312 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 IFNA10P01566 189 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 CTSGP08311 255 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 IGLL1P15814 213 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 ZP3P21754 424 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 NPY1RP25929 384 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 HOXD3P31249 432 aaPredicted RBP5.66□□□□□ -1.5
LINC01049-201ENST00000426840 MFAP4P55083 255 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 TATDN3Q17R31 274 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 RGS21Q2M5E4 152 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 GSG1LQ6UXU4 331 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 IL34Q6ZMJ4 242 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 NOXA1Q86UR1 476 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 GPHB5Q86YW7 130 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 RNASEH2CQ8TDP1 164 aaKnown RBP5.66□□□□□ -1.5
LINC01049-201ENST00000426840 PINX1Q96BK5 328 aaKnown RBP5.66□□□□□ -1.5
LINC01049-201ENST00000426840 SMIM8Q96KF7 97 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 CIB3Q96Q77 187 aaPredicted RBP5.66□□□□□ -1.5
LINC01049-201ENST00000426840 TXN2Q99757 166 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 CHRDL1Q9BU40 450 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 C11orf1Q9H5F2 150 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 ALG5Q9Y673 324 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 VWFP04275 2813 aa5.66□□□□□ -1.5
LINC01049-201ENST00000426840 OR2T8A6NH00 312 aa5.65□□□□□ -1.5
LINC01049-201ENST00000426840 PMS2P5A8MQ11 134 aa5.65□□□□□ -1.5
LINC01049-201ENST00000426840 G3V4G9 280 aa5.65□□□□□ -1.5
LINC01049-201ENST00000426840 K7EPK0 472 aa5.65□□□□□ -1.5
LINC01049-201ENST00000426840 GOSR2O14653 212 aa5.65□□□□□ -1.5
LINC01049-201ENST00000426840 TGOLN2O43493 480 aa5.65□□□□□ -1.5
LINC01049-201ENST00000426840 LY86O95711 162 aa5.65□□□□□ -1.5
LINC01049-201ENST00000426840 GPR183P32249 361 aa5.65□□□□□ -1.5
LINC01049-201ENST00000426840 ARL3P36405 182 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms